Computer-Aided Segmentation of Polyps Using Mask R-CNN and Approach to Reduce False Positives | SpringerLink
Skip to main content

Computer-Aided Segmentation of Polyps Using Mask R-CNN and Approach to Reduce False Positives

  • Conference paper
  • First Online:
Intelligent Data Engineering and Analytics

Part of the book series: Smart Innovation, Systems and Technologies ((SIST,volume 266))

Abstract

Computer-aided detection and segmentation of polyps present inside colon are quite challenging due to the large variations of polyps in features like shape, texture, size, and color, and the presence of various polyp-like structures during colonoscopy. In this paper, we apply a mask region-based convolutional neural network (Mask R-CNN) approach for the detection and segmentation of polyps in the images obtained from colonoscopy videos. We propose an efficient method to reduce the false positives in the computer-aided detection system. To achieve this, we rigorously train our model by selecting non-polyp regions in the image which have high probability of getting detected as a polyp. Using two colonoscopic frame datasets, we demonstrate the experimental results that show the significant reduction in the number of false positives by adding selected regions in our computer-aided polyp segmentation system.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
¥17,985 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
JPY 3498
Price includes VAT (Japan)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
JPY 26311
Price includes VAT (Japan)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
JPY 32889
Price includes VAT (Japan)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
JPY 32889
Price includes VAT (Japan)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  1. Sung, H., Ferlay, J., Siegel, R.L., Laversanne, M., Soerjomataram, I., Jemal, A., Bray, F.: Global cancer statistics 2020: Globocan estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA: Cancer J. Clinicians (2021). https://doi.org/10.3322/caac.21660, https://acsjournals.onlinelibrary.wiley.com/doi/abs/10.3322/caac.21660

  2. Cancer.net webpage. https://cancer.net/cancer-types/colorectal-cancer/stages. Last accessed 15 Mar 2021

  3. Leufkens, A., van Oijen, M.G.H., Vleggaar, F., Siersema, P.: Factors influencing the miss rate of polyps in a back-to-back colonoscopy study. Endoscopy 44(5), 470–475 (2012). https://doi.org/10.1055/s-0031-1291666

    Article  Google Scholar 

  4. Alexandre, L.A., Nobre, N., Casteleiro, J.: Color and position versus texture features for endoscopic polyp detection. In: 2008 International Conference on BioMedical Engineering and Informatics, vol. 2, pp. 38–42 (2008). https://doi.org/10.1109/BMEI.2008.246

  5. Bernal, J., Tajkbaksh, N., Sánchez, F.J., Matuszewski, B.J., Chen, H., Yu, L., Angermann, Q., Romain, O., Rustad, B., Balasingham, I., Pogorelov, K., Choi, S., Debard, Q., Maier-Hein, L., Speidel, S., Stoyanov, D., Brandao, P., Córdova, H., Sánchez-Montes, C., Gurudu, S.R., Fernández-Esparrach, G., Dray, X., Liang, J., Histace, A.: Comparative validation of polyp detection methods in video colonoscopy: results from the miccai 2015 endoscopic vision challenge. IEEE Trans. Med. Imaging 36(6), 1231–1249 (2017). https://doi.org/10.1109/TMI.2017.2664042

  6. Iakovidis, D.K., Maroulis, D.E., Karkanis, S.A.: An intelligent system for automatic detection of gastrointestinal adenomas in video endoscopy. Comput. Biol. Med. 36(10), 1084–1103 (2006). https://doi.org/10.1016/j.compbiomed.2005.09.008, https://www.sciencedirect.com/science/article/pii/S0010482505000983, Intelligent Technologies in Medicine and Bioinformatics

  7. Tajbakhsh, N., Gurudu, S.R., Liang, J.: Automated polyp detection in colonoscopy videos using shape and context information. IEEE Trans. Med. Imaging 35(2), 630–644 (2016). https://doi.org/10.1109/TMI.2015.2487997

    Article  Google Scholar 

  8. Hasan, M.M., Islam, N., Rahman, M.M.: Gastrointestinal polyp detection through a fusion of contourlet transform and neural features. J. King Saud Univ.-Comput. Information Sci. (2020)

    Google Scholar 

  9. Shin, Y., Qadir, H.A., Aabakken, L., Bergsland, J., Balasingham, I.: Automatic colon polyp detection using region based deep CNN and post learning approaches. CoRR abs/1906.11463 (2019). https://doi.org/10.1109/ACCESS.2018.2856402, http://arxiv.org/abs/1906.11463

  10. Yu, L., Chen, H., Dou, Q., Qin, J., Heng, P.A.: Integrating online and offline 3d deep learning for automated polyp detection in colonoscopy videos. IEEE J. Biomed. Health Informatics PP. 1–1 (12 2016). https://doi.org/10.1109/JBHI.2016.2637004

  11. Liu, M., Jiang, J., Wang, Z.: Colonic polyp detection in endoscopic videos with single shot detection based deep convolutional neural network. IEEE Access 7, 75058–75066 (2019). https://doi.org/10.1109/ACCESS.2019.2921027

    Article  Google Scholar 

  12. Cvc-clinic db. https://polyp.grand-challenge.org/CVCClinicDB/. Last accessed 15 Jan 2021

  13. Etis-larib db. //polyp.grand-challenge.org/EtisLarib/. Last accessed 15 Jan 2021

    Google Scholar 

  14. He, K., Gkioxari, G., Dollár, P., Girshick, R.B.: Mask R-CNN. CoRR abs/1703.06870 (2017). http://arxiv.org/abs/1703.06870

  15. Ren, S., He, K., Girshick, R.B., Sun, J.: Faster R-CNN: towards real-time object detection with region proposal networks. CoRR abs/1506.01497 (2015). http://arxiv.org/abs/1506.01497

  16. He, K., Zhang, X., Ren, S., Sun, J.: Deep residual learning for image recognition. CoRR abs/1512.03385 (2015). http://arxiv.org/abs/1512.03385

  17. Lin, T.Y., Maire, M., Belongie, S.J., Hays, J., Perona, P., Ramanan, D., Dollár, P., Zitnick, C.L.: Microsoft coco: common objects in context. In: ECCV (2014)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2022 The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd.

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Jha, S., Jagtap, B., Mazumdar, S., Sinha, S. (2022). Computer-Aided Segmentation of Polyps Using Mask R-CNN and Approach to Reduce False Positives. In: Satapathy, S.C., Peer, P., Tang, J., Bhateja, V., Ghosh, A. (eds) Intelligent Data Engineering and Analytics. Smart Innovation, Systems and Technologies, vol 266. Springer, Singapore. https://doi.org/10.1007/978-981-16-6624-7_10

Download citation

Publish with us

Policies and ethics