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MPI Correctness Checking with Marmot

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Tools for High Performance Computing

Abstract

Parallel programming is a complex, and since the multi-core era has dawned, also a more and more common task that can be alleviated considerably by tools supporting the application development and porting process. The Message Passing Interface (MPI) is widely used to write parallel programs using message passing, but it does not guarantee portability between different MPI implementations. When an application runs without any problems on one platform but crashes or gives wrong results on another platform, developers tend to blame the compiler/architecture/MPI implementation. In many cases the problem is a subtle programming error in the application undetected on the platforms used previously. Finding this bug can be a very strenuous and difficult task. In this paper we present the Marmot tool, an automated correctness checker for MPI applications during runtime. Examples of violations of the MPI standard are the introduction of irreproducibility, deadlocks, incorrect management of resources such as communicators, groups, datatypes etc. or the use of non-portable constructs. To cover different aspects of correctness debugging in a user-friendly environment, also in hybrid applications using both MPI and OpenMP, we also work on coupling Marmot with a parallel debugger (DDT) or a threading tool (Intel® Thread Checker). Some examples of experiences with real-world applications are given.

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Correspondence to Bettina Krammer .

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Krammer, B., Hilbrich, T., Himmler, V., Czink, B., Dichev, K., Müller, M.S. (2008). MPI Correctness Checking with Marmot. In: Resch, M., Keller, R., Himmler, V., Krammer, B., Schulz, A. (eds) Tools for High Performance Computing. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-68564-7_5

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  • DOI: https://doi.org/10.1007/978-3-540-68564-7_5

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-68561-6

  • Online ISBN: 978-3-540-68564-7

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