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Filtering Outliers in One Step with Genetic Programming

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Parallel Problem Solving from Nature – PPSN XV (PPSN 2018)

Abstract

Outliers are one of the most difficult issues when dealing with real-world modeling tasks. Even a small percentage of outliers can impede a learning algorithm’s ability to fit a dataset. While robust regression algorithms exist, they fail when a dataset is corrupted by more than 50% of outliers (breakdown point). In the case of Genetic Programming, robust regression has not been properly studied. In this paper we present a method that works as a filter, removing outliers from the target variable (vertical outliers). The algorithm is simple, it uses a randomly generated population of GP trees to determine which target values should be labeled as outliers. The method is highly efficient. Results show that it can return a clean dataset when contamination reaches as high as 90%, and may be able to handle higher levels of contamination. In this study only synthetic univariate benchmarks are used to evaluate the approach, but it must be stressed that no other approaches can deal with such high levels of outlier contamination while requiring such small computational effort.

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Notes

  1. 1.

    In fact, while the reported experiments only consider up to this level of data contamination, it is straightforward to extend our approach to more severe scenarios.

  2. 2.

    While it would be relatively simple to parallelize the algorithm, since all samples are taken independently, the cost can still become quite high if the modelling is done with GP.

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Acknowledgments

This research was funded by CONACYT (Mexico) Fronteras de la Ciencia 2015-2 Project No. FC-2015-2:944, BioISI R&D unit, UID/MULTI/04046/2013 funded by FCT/MCTES/PIDDAC, Portugal, and first author supported by CONACYT graduate scholarship No. 573397.

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Correspondence to Leonardo Trujillo .

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López, U., Trujillo, L., Legrand, P. (2018). Filtering Outliers in One Step with Genetic Programming. In: Auger, A., Fonseca, C., Lourenço, N., Machado, P., Paquete, L., Whitley, D. (eds) Parallel Problem Solving from Nature – PPSN XV. PPSN 2018. Lecture Notes in Computer Science(), vol 11101. Springer, Cham. https://doi.org/10.1007/978-3-319-99253-2_17

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  • DOI: https://doi.org/10.1007/978-3-319-99253-2_17

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