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Execution of a Bioinformatics Application in a Joint IRISGrid/EGEE Testbed

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Parallel Processing and Applied Mathematics (PPAM 2005)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3911))

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Abstract

This paper describes the execution of a Bioinformatics application over a highly distributed and heterogeneous testbed. This testbed is composed of resources devoted to EGEE and IRISGrid projects and has been integrated by taking advantage of the modular, decentralized and “end-to-end” architecture of the Grid W ay framework. Results show the feasibility of building loosely-coupled Grid environments based only on Globus services, while obtaining non trivial levels of quality of service. Such approach allows a straightforward resource sharing as the resources are accessed by using de facto standard protocols and interfaces.

This research was supported by Ministerio de Ciencia y Tecnología, through the research grants TIC 2003-01321 and 2002-12422-E, and by Instituto Nacional de Técnica Aeroespacial “Esteban Terradas” (INTA) – Centro de Astrobiología. The authors participate in the EGEE project, funded by the European Union under contract IST-2003-508833.

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© 2006 Springer-Verlag Berlin Heidelberg

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Vázquez-Poletti, J.L., Huedo, E., Montero, R.S., Llorente, I.M. (2006). Execution of a Bioinformatics Application in a Joint IRISGrid/EGEE Testbed. In: Wyrzykowski, R., Dongarra, J., Meyer, N., Waśniewski, J. (eds) Parallel Processing and Applied Mathematics. PPAM 2005. Lecture Notes in Computer Science, vol 3911. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11752578_100

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  • DOI: https://doi.org/10.1007/11752578_100

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-34141-3

  • Online ISBN: 978-3-540-34142-0

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