Transcranial brain atlas-based optimization for functional near-infrared spectroscopy optode arrangement: Theory, algorithm, and application
- PMID: 33332685
- PMCID: PMC7978141
- DOI: 10.1002/hbm.25318
Transcranial brain atlas-based optimization for functional near-infrared spectroscopy optode arrangement: Theory, algorithm, and application
Abstract
The quality of optode arrangement is crucial for group imaging studies when using functional near-infrared spectroscopy (fNIRS). Previous studies have demonstrated the promising effectiveness of using transcranial brain atlases (TBAs), in a manual and intuition-based way, to guide optode arrangement when individual structural MRI data are unavailable. However, the theoretical basis of using TBA to optimize optode arrangement remains unclear, which leads to manual and subjective application. In this study, we first describe the theoretical basis of TBA-based optimization of optode arrangement using a mathematical framework. Second, based on the theoretical basis, an algorithm is proposed for automatically arranging optodes on a virtual scalp. The resultant montage is placed onto the head of each participant guided by a low-cost and portable navigation system. We compared our method with the widely used 10/20-system-assisted optode arrangement procedure, using finger-tapping and working memory tasks as examples of both low- and high-level cognitive systems. Performance, including optode montage designs, locations on each participant's scalp, brain activation, as well as ground truth indices derived from individual MRI data were evaluated. The results give convergent support for our method's ability to provide more accurate, consistent and efficient optode arrangements for fNIRS group imaging than the 10/20 method.
Keywords: fNIRS; functional near-infrared spectroscopy; navigation; optode arrangement; optode montage design; optode placement; topography; transcranial brain atlas.
© 2020 The Authors. Human Brain Mapping published by Wiley Periodicals LLC.
Conflict of interest statement
The authors declare no conflicts of interest.
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References
-
- Bluestone, A. Y. , Abdoulaev, G. , Schmitz, C. H. , Barbour, R. L. , & Hielscher, A. H. (2001). Three‐dimensional optical tomography of hemodynamics in the human head. Optics Express, 9, 272–286. - PubMed
-
- Boas, D. A. , & Dale, A. M. (2005). Simulation study of magnetic resonance imaging–guided cortically constrained diffuse optical tomography of human brain function. Applied Optics, 44, 1957–1968. - PubMed
-
- Boas, D. A. , Elwell, C. E. , Ferrari, M. , & Taga, G. (2014). Twenty years of functional near‐infrared spectroscopy: Introduction for the special issue. NeuroImage, 85, 1–5. - PubMed
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