Detecting synfire chains in parallel spike data
- PMID: 22361572
- DOI: 10.1016/j.jneumeth.2012.02.003
Detecting synfire chains in parallel spike data
Abstract
The synfire chain model of brain organization has received much theoretical attention since its introduction (Abeles, 1982, 1991). However there has been no convincing experimental demonstration of synfire chains due partly to limitations of recording technology but also due to lack of appropriate analytic methods for large scale recordings of parallel spike trains. We have previously published one such method based on intersection of the neural populations active at two different times (Schrader et al., 2008). In the present paper we extend this analysis to deal with higher firing rates and noise levels, and develop two additional tools based on properties of repeating firing patterns. All three measures show characteristic signatures if synfire chains underlie the recorded data. However we demonstrate that the detection of repeating firing patterns alone (as used in several papers) is not enough to infer the presence of synfire chains. Positive results from all three measures are needed.
Copyright © 2012 Elsevier B.V. All rights reserved.
Similar articles
-
Detecting synfire chain activity using massively parallel spike train recording.J Neurophysiol. 2008 Oct;100(4):2165-76. doi: 10.1152/jn.01245.2007. Epub 2008 Jul 16. J Neurophysiol. 2008. PMID: 18632888 Free PMC article.
-
Modeling compositionality by dynamic binding of synfire chains.J Comput Neurosci. 2004 Sep-Oct;17(2):179-201. doi: 10.1023/B:JCNS.0000037682.18051.5f. J Comput Neurosci. 2004. PMID: 15306739
-
Graded, Dynamically Routable Information Processing with Synfire-Gated Synfire Chains.PLoS Comput Biol. 2016 Jun 16;12(6):e1004979. doi: 10.1371/journal.pcbi.1004979. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27310184 Free PMC article.
-
Neurocomputational models of working memory.Nat Neurosci. 2000 Nov;3 Suppl:1184-91. doi: 10.1038/81460. Nat Neurosci. 2000. PMID: 11127836 Review.
-
Searching for significance in spatio-temporal firing patterns.Acta Neurobiol Exp (Wars). 2004;64(2):203-7. doi: 10.55782/ane-2004-1506. Acta Neurobiol Exp (Wars). 2004. PMID: 15366253 Review.
Cited by
-
Detecting multineuronal temporal patterns in parallel spike trains.Front Neuroinform. 2012 May 22;6:18. doi: 10.3389/fninf.2012.00018. eCollection 2012. Front Neuroinform. 2012. PMID: 22661942 Free PMC article.
-
ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains.PLoS Comput Biol. 2016 Jul 15;12(7):e1004939. doi: 10.1371/journal.pcbi.1004939. eCollection 2016 Jul. PLoS Comput Biol. 2016. PMID: 27420734 Free PMC article.
-
Acceleration of the SPADE Method Using a Custom-Tailored FP-Growth Implementation.Front Neuroinform. 2021 Sep 16;15:723406. doi: 10.3389/fninf.2021.723406. eCollection 2021. Front Neuroinform. 2021. PMID: 34603002 Free PMC article.
-
Finding neural assemblies with frequent item set mining.Front Neuroinform. 2013 May 31;7:9. doi: 10.3389/fninf.2013.00009. eCollection 2013. Front Neuroinform. 2013. PMID: 23755010 Free PMC article.
-
High-capacity embedding of synfire chains in a cortical network model.J Comput Neurosci. 2013 Apr;34(2):185-209. doi: 10.1007/s10827-012-0413-9. Epub 2012 Aug 11. J Comput Neurosci. 2013. PMID: 22878688 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources