Exception in thread "main" java.util.zip.ZipException: Bad CRC checksum for entry META-INF/MANIFEST.MF #29
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Description
Hi,
with the release of version 1.0.1 of the Tomcat Migration Tool for Jakarta EE I'm having some issues with a couple of jar files in my project which cannot be migrated due to an exception. Same jar(s) can be migrated using version 1.0.0:
jakartaee-migration-1.0.1-shaded.jar
$ java -jar jakartaee-migration-1.0.1-shaded.jar jna-platform-4.5.1.jar jna-platform-4.5.1.jar.jakarta
Performing migration from source [/jna-platform-4.5.1.jar] to destination [/jna-platform-4.5.1.jar.jakarta] with Jakarta EE specification profile [TOMCAT]
Migration starting for archive [jna-platform-4.5.1.jar] using streaming
Exception in thread "main" java.util.zip.ZipException: Bad CRC checksum for entry META-INF/MANIFEST.MF: 16b8446c instead of 4535229
at org.apache.tomcat.jakartaee.commons.compress.archivers.zip.ZipArchiveOutputStream.handleSizesAndCrc(ZipArchiveOutputStream.java:718)
at org.apache.tomcat.jakartaee.commons.compress.archivers.zip.ZipArchiveOutputStream.closeArchiveEntry(ZipArchiveOutputStream.java:607)
at org.apache.tomcat.jakartaee.Migration.migrateArchiveStreaming(Migration.java:228)
at org.apache.tomcat.jakartaee.Migration.migrateStream(Migration.java:285)
at org.apache.tomcat.jakartaee.Migration.migrateFile(Migration.java:197)
at org.apache.tomcat.jakartaee.Migration.execute(Migration.java:163)
at org.apache.tomcat.jakartaee.MigrationCLI.main(MigrationCLI.java:94)
Suppressed: java.io.IOException: This archive contains unclosed entries.
at org.apache.tomcat.jakartaee.commons.compress.archivers.zip.ZipArchiveOutputStream.finish(ZipArchiveOutputStream.java:534)
at org.apache.tomcat.jakartaee.commons.compress.archivers.zip.ZipArchiveOutputStream.close(ZipArchiveOutputStream.java:1090)
at org.apache.tomcat.jakartaee.Migration.migrateArchiveStreaming(Migration.java:214)
... 4 more
jakartaee-migration-1.0.0-shaded.jar
$ java -jar jakartaee-migration-1.0.0-shaded.jar jna-platform-4.5.1.jar jna-platform-4.5.1.jar.jakarta
Performing migration from source [/jna-platform-4.5.1.jar] to destination [/jna-platform-4.5.1.jar.jakarta] with Jakarta EE specification profile [TOMCAT]
Migration starting for archive [jna-platform-4.5.1.jar] using streaming
Migration finished for archive [jna-platform-4.5.1.jar]
Migration completed successfully in [529] milliseconds
Java version: OpenJDK 11 as well as OpenJDK 17
OS version: Ubuntu 22.04 as well as 20.04
Simple reproducer:
- fire up a OpenJDK Docker container, e.g.
docker run -it --rm openjdk:11 bash - download an affected jar like Java Native Access Platform 4.5.1
- download Tomcat Migration Tool for Jakarta EE 1.0.1
- try to migrate the jar, e.g.
java -jar jakartaee-migration-1.0.1-shaded.jar jna-platform-4.5.1.jar jna-platform-4.5.1.jar.jakarta
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