10x Genomics · GitHub
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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 389 94

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 114 15

  3. spaceranger spaceranger Public

    Rust 1

Repositories

Showing 10 of 71 repositories
  • HumanColonCancer_VisiumHD Public

    Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

    10XGenomics/HumanColonCancer_VisiumHD’s past year of commit activity
    R 52 3 1 0 Updated Mar 17, 2025
  • bamtofastq Public

    Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

    10XGenomics/bamtofastq’s past year of commit activity
    Rust 61 MIT 7 17 13 Updated Mar 17, 2025
  • analysis_guides Public

    10x Genomics analysis guides files

    10XGenomics/analysis_guides’s past year of commit activity
    Jupyter Notebook 8 10 1 0 Updated Mar 14, 2025
  • rkm Public Forked from genbattle/rkm

    Generic k-means implementation written in Rust

    10XGenomics/rkm’s past year of commit activity
    Rust 0 9 0 1 Updated Mar 13, 2025
  • rust-shardio Public

    Out-of-memory sorting of large datasets map / reduce style processing

    10XGenomics/rust-shardio’s past year of commit activity
    Rust 47 MIT 4 3 3 Updated Mar 10, 2025
  • enclone Public

    VDJ Clonotyping & Analysis Tools

    10XGenomics/enclone’s past year of commit activity
    Rust 48 14 4 0 Updated Mar 7, 2025
  • spaceranger Public
    10XGenomics/spaceranger’s past year of commit activity
    Rust 1 0 1 1 Updated Mar 7, 2025
  • image-analysis-rs Public
    10XGenomics/image-analysis-rs’s past year of commit activity
    Rust 0 0 0 1 Updated Mar 7, 2025
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 16 MIT 3 0 4 Updated Mar 3, 2025
  • cellranger Public

    10x Genomics Single Cell Analysis

    10XGenomics/cellranger’s past year of commit activity
    Rust 389 94 0 0 Updated Feb 11, 2025
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