As a guest user you are not logged in or recognized by your IP address. You have
access to the Front Matter, Abstracts, Author Index, Subject Index and the full
text of Open Access publications.
Automatic Integration of Clinical and Genetic Data Using cBioPortal
Mauricio Brunner, Lucas Mullen, Federico Jauk, Javier Oliver, Federico Cayol, José Minata, Victor Herrera, Walter Pavicic, Daniel Luna, Marcelo Risk, Hernan Garcia Rivello, Sonia Benitez
Precision medicine seeks to improve the prevention, diagnosis and treatment of patients based on genetic characteristics unique to each person. In oncology, therapeutic decisions have been established based on the genomic characteristics of each patient’s tumor.
Data integration is key for the successful implementation of precision medicine since it is necessary for both studying a large volume of data from different sources and working with an interdisciplinary and translational vision.
In this work, a bioinformatic process was successfully implemented that allows the integration of patients’ genomic data, from two molecular biology laboratories, with their clinical data provided by their electronic medical records. For this, the REDCap data capture software, the cBioPortal visualization and analysis software, and a computer tool developed to automate the processing and annotation of the information in REDCap were used to be included in cBioPortal, for the “Map of Tumor Genomic Actionability of Argentina” project.
This website uses cookies
We use cookies to provide you with the best possible experience. They also allow us to analyze user behavior in order to constantly improve the website for you. Info about the privacy policy of IOS Press.
This website uses cookies
We use cookies to provide you with the best possible experience. They also allow us to analyze user behavior in order to constantly improve the website for you. Info about the privacy policy of IOS Press.