Relevance of Entities in Reaction Systems | SpringerLink
Skip to main content
Springer Nature Link
Log in

Relevance of Entities in Reaction Systems

  • Chapter
Languages Alive

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 7300))

  • 480 Accesses

Abstract

Reaction systems are a model for the investigation of processes carried out by biochemical reactions in living cells. A reaction system consists of a set of reactions which transform a current system’s state (a set of entities) into the successor state. In this paper we investigate which entities are actually relevant from the point of view of generating dynamic processes through such state transformations.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Log in via an institution

Subscribe and save

Springer+ Basic
¥17,985 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
JPY 3498
Price includes VAT (Japan)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
JPY 5719
Price includes VAT (Japan)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
JPY 7149
Price includes VAT (Japan)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

Similar content being viewed by others

References

  1. Brijder, R., Ehrenfeucht, A., Main, M.G., Rozenberg, G.: A tour of reaction systems. Int. J. Found. Comput. Sci. 22(7), 1499–1517 (2011)

    Article  MathSciNet  MATH  Google Scholar 

  2. Brijder, R., Ehrenfeucht, A., Rozenberg, G.: Reaction Systems with Duration. In: Kelemen, J., Kelemenová, A. (eds.) Computation, Cooperation, and Life. LNCS, vol. 6610, pp. 191–202. Springer, Heidelberg (2011)

    Chapter  Google Scholar 

  3. Ehrenfeucht, A., Main, M.G., Rozenberg, G.: Combinatorics of life and death for reaction systems. Int. J. Found. Comput. Sci. 21(3), 345–356 (2010)

    Article  MathSciNet  MATH  Google Scholar 

  4. Ehrenfeucht, A., Rozenberg, G.: Events and modules in reaction systems. Theor. Comput. Sci. 376(1-2), 3–16 (2007)

    Article  MathSciNet  MATH  Google Scholar 

  5. Ehrenfeucht, A., Rozenberg, G.: Reaction systems. Fundam. Inform. 75(1-4), 263–280 (2007)

    MathSciNet  MATH  Google Scholar 

  6. Ehrenfeucht, A., Rozenberg, G.: Introducing time in reaction systems. Theor. Comput. Sci. 410(4-5), 310–322 (2009)

    Article  MathSciNet  MATH  Google Scholar 

  7. Kleijn, J., Koutny, M., Rozenberg, G.: Modelling reaction systems with Petri nets. In: BioPPN-2011, International Workshop on Biological Processes & Petri Nets. CEUR-WS Workshop Proceedings, vol. 724, pp. 36–52 (2011)

    Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Department of Computer Science, University of Colorado at Boulder, 430 UCB, Boulder, CO, 80309-0430, U.S.A.

    Andrzej Ehrenfeucht & Grzegorz Rozenberg

  2. LIACS, Leiden University, P.O. Box 9512, 2300 RA, The Netherlands

    Jetty Kleijn & Grzegorz Rozenberg

  3. School of Computing Science, Newcastle University, NE1 7RU, UK

    Maciej Koutny

Authors
  1. Andrzej Ehrenfeucht
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. Jetty Kleijn
    View author publications

    You can also search for this author in PubMed Google Scholar

  3. Maciej Koutny
    View author publications

    You can also search for this author in PubMed Google Scholar

  4. Grzegorz Rozenberg
    View author publications

    You can also search for this author in PubMed Google Scholar

Editor information

Editors and Affiliations

  1. Institut für Informatik, Universität Potsdam, August-Bebel-Straße 89, 14482, Potsdam, Germany

    Henning Bordihn

  2. Institut für Informatik, Universität Giessen, Arndtstraße 2, 35392, Giessen, Germany

    Martin Kutrib

  3. Fakultät für Informatik, Otto-von-Guericke-Universität Magdeburg, Universitätsplatz 2, 39016, Magdeburg, Germany

    Bianca Truthe

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer-Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Ehrenfeucht, A., Kleijn, J., Koutny, M., Rozenberg, G. (2012). Relevance of Entities in Reaction Systems. In: Bordihn, H., Kutrib, M., Truthe, B. (eds) Languages Alive. Lecture Notes in Computer Science, vol 7300. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-31644-9_3

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-31644-9_3

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-31643-2

  • Online ISBN: 978-3-642-31644-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics