Abstract
A major challenge in medicine is the rehabilitation of brain-injured patients with poor neurological outcomes who experience chronic impairment of consciousness, termed minimally conscious state or vegetative state. Resting-state functional Magnetic Resonance Imaging (rs-fMRI) is easy-to-acquire and holds the promise of large-range biomarkers. Previous rs-fMRI studies in monkeys and humans have highlighted that different consciousness levels are characterized by the relative prevalence of different functional connectivity patterns - also referred to as brain states - which conform closely to the underlying structural connectivity. Results suggest that changes in consciousness lead to changes in connectivity patterns, not only at the level of the co-activation strength between regions but also at the level of entire networks. In this work, a four-stage framework is proposed to identify interpretable spatial signature of consciousness, by i) defining brain regions of interest (ROIs) from atlases, ii) filtering and extracting the time series associated with these ROIs, iii) recovering disjoint networks and associated connectivities, and iv) performing pairwise non-parametric tests between network activities grouped by acquisition conditions. Our approach yields tailored networks, spatially consistent and symmetric. They will be helpful to study spontaneous recovery from disorders of consciousness known to be accompanied by a functional restoration of several networks.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
Allen, E.A., Damaraju, E., Plis, S.M., Erhardt, E.B., Eichele, T., Calhoun, V.D.: Tracking whole-brain connectivity dynamics in the resting state. Cerebral Cortex 24(3), 663–676 (2014). https://doi.org/10.1093/cercor/bhs352
Bakker, R., Wachtler, T., Diesmann, M.: Cocomac 2.0 and the future of tract-tracing databases. Front. Neuroinform. 6, 30 (2012). https://doi.org/10.3389/fninf.2012.00030
Barttfeld, P., Uhrig, L., Sitt, J.D., Sigman, M., Jarraya, B., Dehaene, S.: Signature of consciousness in the dynamics of resting-state brain activity. Proc. Natl. Acad. Sci. 112(3), 887–892 (2015). https://doi.org/10.1073/pnas.1418031112
Bernard, J.B., Steven, L.: One, not two, neural correlates of consciousness. Trends Cogn. Sci. 9(6), 269 (2005). https://doi.org/10.1016/j.tics.2005.04.008
Calabrese, E., et al.: A diffusion tensor MRI Atlas of the postmortem rhesus macaque brain. Neuroimage 117, 408–416 (2015). https://doi.org/10.1016/j.neuroimage.2015.05.072
Dadi, K., Abraham, A., Rahim, M., Thirion, B., Varoquaux, G.: Comparing functional connectivity based predictive models across datasets. In: 2016 International Workshop on Pattern Recognition in Neuroimaging (PRNI), pp. 1–4 (2016). https://doi.org/10.1109/PRNI.2016.7552359
Dehaene, S., Changeux, J.P.: Experimental and theoretical approaches to conscious processing. Neuron 70(2), 200–227 (2011). https://doi.org/10.1016/j.neuron.2011.03.018
Dehaene, S., Charles, L., King, J.R., Marti, S.: Toward a computational theory of conscious processing. Current Opinion Neurobiol. 25, 76–84 (2014). https://doi.org/10.1016/j.conb.2013.12.005, theoretical and computational neuroscience
Dehaene, S., Kerszberg, M., Changeux, J.P.: A neuronal model of a global workspace in effortful cognitive tasks. Proc. Natl. Acad. Sci. 95(24), 14529–14534 (1998). https://doi.org/10.1073/pnas.95.24.14529
Drysdale, A., et al.: Resting-state connectivity biomarkers define neurophysiological subtypes of depression. Nature Med. 23, 28–38 (2016). https://doi.org/10.1038/nm.4246
Faugeras, F., et al.: Probing consciousness with event-related potentials in the vegetative state. Neurology 77(3), 264–268 (2011). https://doi.org/10.1212/WNL.0b013e3182217ee8
Grigis, A., Tasserie, J., Frouin, V., Jarraya, B., Uhrig, L.: Predicting cortical signatures of consciousness using dynamic functional connectivity graph-convolutional neural networks. bioRxiv (2020). https://doi.org/10.1101/2020.05.11.078535
Hahn, G., et al.: Signature of consciousness in brain-wide synchronization patterns of monkey and human fMRI signals. Neuroimage 226, 117470 (2021). https://doi.org/10.1016/j.neuroimage.2020.117470
King, J.R., et al.: Information sharing in the brain indexes consciousness in noncommunicative patients. Curr. Biol. 23(19), 1914–1919 (2013). https://doi.org/10.1016/j.cub.2013.07.075
Laureys, S., Faymonville, M., Luxen, A., Lamy, M., Franck, G., Maquet, P.: Restoration of thalamocortical connectivity after recovery from persistent vegetative state. The Lancet 355(9217), 1790–1791 (2000). https://doi.org/10.1016/S0140-6736(00)02271-6
Laureys, S., Lemaitre, C., Maquet, P., Phillips, C., Franck, G.: Cerebral metabolism during vegetative state and after recovery to consciousness. J. Neurolo. Neurosurgery Psychiatry 67(1), 121–122 (1999). https://doi.org/10.1136/jnnp.67.1.121
Monti, R.P., et al.: Interpretable brain age prediction using linear latent variable models of functional connectivity. PLOS ONE 15(6), 1–25 (2020). https://doi.org/10.1371/journal.pone.0232296
Sitt, J.D., et al.: Large scale screening of neural signatures of consciousness in patients in a vegetative or minimally conscious state. Brain J. Neurol. 137(Pt 8), 2258–2270 (2014). https://doi.org/10.1093/brain/awu141
Tasserie, J., Grigis, A., Uhrig, L., Dupont, M., Amadon, A., Jarraya, B.: Pypreclin: an automatic pipeline for macaque functional MRI preprocessing. Neuroimage 207, 116353 (2020). https://doi.org/10.1016/j.neuroimage.2019.116353
Taylor, J.J., Kurt, H.G., Anand, A.: Resting state functional connectivity biomarkers of treatment response in mood disorders: a review. Front. Psychiatry 12 (2021). https://doi.org/10.3389/fpsyt.2021.565136
Uhrig, L., et al.: Resting-state dynamics as a cortical signature of anesthesia in monkeys. Anesthesiology 129(5), 942–958 (2018). https://doi.org/10.1097/ALN.0000000000002336
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
1 Electronic supplementary material
Below is the link to the electronic supplementary material.
Rights and permissions
Copyright information
© 2022 The Author(s), under exclusive license to Springer Nature Switzerland AG
About this paper
Cite this paper
Grigis, A., Gomez, C., Frouin, V., Uhrig, L., Jarraya, B. (2022). Interpretable Signature of Consciousness in Resting-State Functional Network Brain Activity. In: Wang, L., Dou, Q., Fletcher, P.T., Speidel, S., Li, S. (eds) Medical Image Computing and Computer Assisted Intervention – MICCAI 2022. MICCAI 2022. Lecture Notes in Computer Science, vol 13431. Springer, Cham. https://doi.org/10.1007/978-3-031-16431-6_25
Download citation
DOI: https://doi.org/10.1007/978-3-031-16431-6_25
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-031-16430-9
Online ISBN: 978-3-031-16431-6
eBook Packages: Computer ScienceComputer Science (R0)