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ORCIDUlrike Stege
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- affiliation: University of Victoria, Canada
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2020 – today
- 2024
[j25]Luke Trinity
, Ulrike Stege, Hosna Jabbari:
Tying the knot: Unraveling the intricacies of the coronavirus frameshift pseudoknot. PLoS Comput. Biol. 20(5): 1011787 (2024)- 2023
- [j24]Luke Trinity, Ian Wark, Lance Lansing, Hosna Jabbari, Ulrike Stege:
Shapify: Paths to SARS-CoV-2 frameshifting pseudoknot. PLoS Comput. Biol. 19(2) (2023) - [c47]Addie Jordon, Austin Hawkins-Seagram, Samantha Norrie, José Ossorio, Ulrike Stege:
QWalkVis: Quantum Walks Visualization Application. QCE 2023: 87-93 - [c46]Juan Giraldo, José Ossorio, Norha M. Villegas, Gabriel Tamura, Ulrike Stege:
QPLEX: Realizing the Integration of Quantum Computing into Combinatorial Optimization Software. QCE 2023: 1044-1049 - [i9]Tristan Zaborniak, Ulrike Stege:
Discrete quadratic model QUBO solution landscapes. CoRR abs/2305.00568 (2023) - [i8]Juan Giraldo, José Ossorio, Norha M. Villegas, Gabriel Tamura, Ulrike Stege:
QPLEX: Realizing the Integration of Quantum Computing into Combinatorial Optimization Software. CoRR abs/2307.14308 (2023) - 2022
- [j23]Raul I. Perez Martell, Alison Ziesel, Hosna Jabbari, Ulrike Stege:
Supervised promoter recognition: a benchmark framework. BMC Bioinform. 23(1): 118 (2022) - [c45]Mehdi Bozzo-Rey, Sean Wagner, Robert Loredo, Ulrike Stege, Hausi A. Müller, Prashanti Priya Angara:
Towards Practical Hybrid Quantum Applications for Industry. CASCON 2022: 245-247 - [c44]Tristan Zaborniak, Juan Giraldo, Hausi A. Müller, Hosna Jabbari, Ulrike Stege:
A QUBO model of the RNA folding problem optimized by variational hybrid quantum annealing. QCE 2022: 174-185 - [c43]Addie Jordon, Austin Hawkins-Seagram, Ulrike Stege:
Implementation and Viusalization of Quantum Walks. QCE 2022: 796-798 - 2021
- [j22]Fei Chen, Lea Gozdzialski, Kuo-Kai Hung, Ulrike Stege, Dennis K. Hore:
Assessing the Molecular Specificity and Orientation Sensitivity of Infrared, Raman, and Vibrational Sum-Frequency Spectra. Symmetry 13(1): 42 (2021) - [c42]Luke Trinity, Andrew Hollar, Haley Greenyer, Hosna Jabbari, Ulrike Stege:
Viz23: web server for visualization of gene expression and locational information. CASCON 2021: 268-273 - [c41]Mehdi Bozzo-Rey, Robert Loredo, Hausi A. Müller, Sean Wagner, Ulrike Stege, Prashanti Priya Angara:
Towards practical quantum applications using hybrid problem solving techniques. CASCON 2021: 305-307 - [c40]Luke Trinity, Lance Lansing, Hosna Jabbari, Ulrike Stege:
SARS-CoV-2 Ribosomal Frameshifting Pseudoknot: Detection of Inter-viral Structural Similarity. ICHI 2021: 451-460 - 2020
- [c39]Prashanti Priya Angara, Ulrike Stege, Hausi A. Müller, Mehdi Bozzo-Rey:
Hybrid quantum-classical problem solving in the NISQ era. CASCON 2020: 247-252 - [c38]Mehdi Bozzo-Rey, Robert Loredo, Hausi A. Müller, Ulrike Stege:
Quantum computing: synergies and opportunities. CASCON 2020: 275-276 - [c37]Prashanti Priya Angara, Ulrike Stege, Andrew MacLean:
Quantum Computing for High-School Students An Experience Report. QCE 2020: 323-329 - [i7]John Ellis, Ulrike Stege:
Correction to: A Practical, Provably Linear Time, In-place and Stable Merge Algorithm via the Perfect Shuffle. CoRR abs/2004.02035 (2020)
2010 – 2019
- 2019
- [c36]Henning Fernau, Ulrike Stege:
Profit Parameterizations of Dominating Set. AAIM 2019: 108-120 - 2018
- [j21]Erin W. Chambers, Sándor P. Fekete, Hella-Franziska Hoffmann, Dimitri Marinakis, Joseph S. B. Mitchell, Srinivasan Venkatesh, Ulrike Stege, Sue Whitesides:
Connecting a set of circles with minimum sum of radii. Comput. Geom. 68: 62-76 (2018) - [j20]Sarah Carruthers, Ulrike Stege, Michael E. J. Masson:
The Role of the Goal in Solving Hard Computational Problems: Do People Really Optimize? J. Probl. Solving 11(1) (2018) - 2017
- [j19]Erin W. Chambers, Alejandro Erickson, Sándor P. Fekete, Jonathan Lenchner, Jeff Sember, S. Venkatesh, Ulrike Stege, Svetlana Stolpner, Christophe Weibel, Sue Whitesides:
Connectivity Graphs of Uncertainty Regions. Algorithmica 78(3): 990-1019 (2017) - [j18]Sarah Carruthers, Ulrike Stege:
Guest Editors’ Introduction. J. Probl. Solving 10(1) (2017) - [c35]Prashanti Angara, Miguel Jiménez, Kirti Agarwal, Harshit Jain, Roshni Jain, Ulrike Stege, Sudhakar Ganti, Hausi A. Müller, Joanna W. Ng:
Foodie fooderson a conversational agent for the smart kitchen. CASCON 2017: 247-253 - [c34]Hausi A. Müller, Norha M. Villegas, Ulrike Stege, Yu Zhao:
Cognitive intelligent personal assistants / agents. CASCON 2017: 294 - 2016
- [c33]Matthew Hemmings, Rick McGeer, Glenn Ricart, Ulrike Stege:
Base64Geo: an efficient data structure and transmission format for large, dense, scalar GIS datasets. CASCON 2016: 106-115 - [c32]Matthew Hemmings, Daniel Ingalls, Robert Krahn, Rick McGeer, Glenn Ricart, Marko Röder, Ulrike Stege:
LiveTalk: A Framework for Collaborative Browser-Based Replicated-Computation Applications. ITC 2016: 270-277 - 2015
- [j17]Allan Scott, Srinivasan Venkatesh, Ulrike Stege:
k-Attribute-Anonymity is hard even for k=2. Inf. Process. Lett. 115(2): 368-370 (2015) - [j16]Sushil Bhojwani, Matt Hemmings, Dan Ingalls, Jens Lincke, Robert Krahn, David John Lary, Rick McGeer, Glenn Ricart, Marko Röder, Yvonne Coady, Ulrike Stege:
The Ignite Distributed Collaborative Visualization System. SIGMETRICS Perform. Evaluation Rev. 43(3): 45-46 (2015) - [c31]Laurie J. Heyer, Anna Lubiw, Debajyoti Mondal, Ulrike Stege, Sue Whitesides:
Reconfiguring a Chain of Cubes. CCCG 2015 - [c30]Sushil Bhojwani, Matthew Hemmings, Daniel Ingalls, Jens Lincke, Robert Krahn, David John Lary, Patrick C. McGeer, Glenn Ricart, Marko Röder, Yvonne Coady, Ulrike Stege:
The Ignite Distributed Collaborative Scientific Visualization System. CloudCom 2015: 186-191 - [e3]Frank Dehne, Jörg-Rüdiger Sack, Ulrike Stege:
Algorithms and Data Structures - 14th International Symposium, WADS 2015, Victoria, BC, Canada, August 5-7, 2015. Proceedings. Lecture Notes in Computer Science 9214, Springer 2015, ISBN 978-3-319-21839-7 [contents] - [i6]John Ellis, Ulrike Stege:
A Provably, Linear Time, In-place and Stable Merge Algorithm via the Perfect Shuffle. CoRR abs/1508.00292 (2015) - 2014
- [c29]Tatiana Gutierrez-Bunster, Ulrike Stege, Alex Thomo, John Taylor:
How do biological networks differ from social networks? (an experimental study). ASONAM 2014: 744-751 - [c28]Andreas Bergen, Ronald J. Desmarais, Sudhakar Ganti, Ulrike Stege:
Towards software-adaptive green computing based on server power consumption. GREENS 2014: 9-16 - 2013
- [j15]Sarah Carruthers, Ulrike Stege:
On Evaluating Human Problem Solving of Computationally Hard Problems. J. Probl. Solving 5(2) (2013) - 2012
- [j14]Sarah Carruthers, Michael E. J. Masson, Ulrike Stege:
Human Performance on Hard Non-Euclidean Graph Problems: Vertex Cover. J. Probl. Solving 5(1) (2012) - [c27]Steven Lonergan, Yagiz Onat Yazir, Ulrike Stege:
A Framework for Classification of Resource Consolidation Management Problems. IEEE CLOUD 2012: 972-973 - [c26]Sean Chester, Jared Gaertner, Ulrike Stege, S. Venkatesh:
Anonymizing Subsets of Social Networks with Degree Constrained Subgraphs. ASONAM 2012: 418-422 - [c25]Ulrike Stege:
The Impact of Parameterized Complexity to Interdisciplinary Problem Solving. The Multivariate Algorithmic Revolution and Beyond 2012: 56-68 - 2011
- [b1]Marina Barsky, Ulrike Stege, Alex Thomo:
Full-Text (Substring) Indexes in External Memory. Synthesis Lectures on Data Management, Morgan & Claypool Publishers 2011, ISBN 978-3-031-00757-6 - [j13]Frances A. Rosamond, Roswitha Bardohl, Stephan Diehl, Uwe Geisler, Gordon Bolduan, Annette Lessmöllmann, Andreas Schwill, Ulrike Stege:
Reaching out to the media: become a computer science ambassador. Commun. ACM 54(3): 113-116 (2011) - [j12]Faisal N. Abu-Khzam, Henning Fernau, Michael A. Langston, Serena Lee-Cultura, Ulrike Stege:
Charge and reduce: A fixed-parameter algorithm for String-to-String Correction. Discret. Optim. 8(1): 41-49 (2011) - [j11]Marina Barsky, Ulrike Stege, Alex Thomo:
Suffix trees for inputs larger than main memory. Inf. Syst. 36(3): 644-654 (2011) - [c24]Sowmya Balasubramanian, Ronald J. Desmarais, Hausi A. Müller, Ulrike Stege, S. Venkatesh:
Characterizing problems for realizing policies in self-adaptive and self-managing systems. SEAMS 2011: 70-79 - [c23]Sarah Carruthers, Todd M. Milford, Timothy Pelton, Ulrike Stege:
Draw a social network. ITiCSE 2011: 178-182 - [c22]Erin W. Chambers, Sándor P. Fekete, Hella-Franziska Hoffmann, Dimitri Marinakis, Joseph S. B. Mitchell, Srinivasan Venkatesh, Ulrike Stege, Sue Whitesides:
Connecting a Set of Circles with Minimum Sum of Radii. WADS 2011: 183-194 - [i5]Erin W. Chambers, Sándor P. Fekete, Hella-Franziska Hoffmann, Dimitri Marinakis, Joseph S. B. Mitchell, Srinivasan Venkatesh, Ulrike Stege, Sue Whitesides:
Connecting a Set of Circles with Minimum Sum of Radii. CoRR abs/1105.0791 (2011) - 2010
- [j10]Marina Barsky, Ulrike Stege, Alex Thomo:
A survey of practical algorithms for suffix tree construction in external memory. Softw. Pract. Exp. 40(11): 965-988 (2010) - [j9]Allan Scott, Ulrike Stege:
Parameterized pursuit-evasion games. Theor. Comput. Sci. 411(43): 3845-3858 (2010) - [c21]Faisal N. Abu-Khzam, Henning Fernau, Michael A. Langston, Serena Lee-Cultura, Ulrike Stege:
A Fixed-Parameter Algorithm for String-to-String Correction. CATS 2010: 31-38 - [c20]Erin W. Chambers, Alejandro Erickson, Sándor P. Fekete, Jonathan Lenchner, Jeff Sember, Srinivasan Venkatesh, Ulrike Stege, Svetlana Stolpner, Christophe Weibel, Sue Whitesides:
Connectivity Graphs of Uncertainty Regions. ISAAC (2) 2010: 434-445 - [c19]Sarah Carruthers, Todd M. Milford, Timothy Pelton, Ulrike Stege:
Moving K-7 education into the information age. WCCCE 2010: 11:1-11:5 - [i4]Erin W. Chambers, Alejandro Erickson, Sándor P. Fekete, Jonathan Lenchner, Jeff Sember, Srinivasan Venkatesh, Ulrike Stege, Svetlana Stolpner, Christophe Weibel, Sue Whitesides:
Connectivity graphs of uncertainty regions. CoRR abs/1009.3469 (2010)
2000 – 2009
- 2009
- [j8]Katherine Gunion, Todd M. Milford, Ulrike Stege:
The Paradigm Recursion: Is It More Accessible When Introduced in Middle School? J. Probl. Solving 2(2) (2009) - [c18]Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upton:
Suffix trees for very large genomic sequences. CIKM 2009: 1417-1420 - [c17]Katherine Gunion, Todd M. Milford, Ulrike Stege:
Curing recursion aversion. ITiCSE 2009: 124-128 - [e2]Stephan Diehl, Michael R. Fellows, Ulrike Stege:
Perspectives Workshop: Preventing the Brainware Crisis, 31.03. - 03.04.2009. Dagstuhl Seminar Proceedings 09142, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, Germany 2009 [contents] - [i3]Stephan Diehl, Ulrike Stege:
09142 Manifesto - Perspectives Workshop: Preventing the Brainware Crisis. Perspectives Workshop: Preventing the Brainware Crisis 2009 - 2008
- [j7]Michael R. Fellows, Christian Knauer, Naomi Nishimura, Prabhakar Ragde, Frances A. Rosamond, Ulrike Stege, Dimitrios M. Thilikos, Sue Whitesides:
Faster Fixed-Parameter Tractable Algorithms for Matching and Packing Problems. Algorithmica 52(2): 167-176 (2008) - [j6]Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upton:
A graph approach to the threshold all-against-all substring matching problem. ACM J. Exp. Algorithmics 12: 1.10:1-1.10:26 (2008) - [c16]Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upton:
A new method for indexing genomes using on-disk suffix trees. CIKM 2008: 649-658 - [c15]Hausi A. Müller, Holger M. Kienle, Ulrike Stege:
Autonomic Computing Now You See It, Now You Don't. ISSSE 2008: 32-54 - [c14]Allan Scott, Ulrike Stege:
Parameterized Chess. IWPEC 2008: 172-189 - [c13]Sabrina Marczak, Daniela E. Damian, Ulrike Stege, Adrian Schröter:
Information Brokers in Requirement-Dependency Social Networks. RE 2008: 53-62 - 2007
- [c12]Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upton:
Shortest Path Approaches for the Longest Common Subsequence of a Set of Strings. BIBE 2007: 327-333 - [e1]Erik D. Demaine, Gregory Z. Gutin, Dániel Marx, Ulrike Stege:
Structure Theory and FPT Algorithmics for Graphs, Digraphs and Hypergraphs, 08.07. - 13.07.2007. Dagstuhl Seminar Proceedings 07281, Internationales Begegnungs- und Forschungszentrum fuer Informatik (IBFI), Schloss Dagstuhl, Germany 2007 [contents] - [i2]Erik D. Demaine, Gregory Z. Gutin, Dániel Marx, Ulrike Stege:
07281 Abstracts Collection -- Structure Theory and FPT Algorithmics for Graphs, Digraphs and Hypergraphs. Structure Theory and FPT Algorithmics for Graphs, Digraphs and Hypergraphs 2007 - [i1]Erik D. Demaine, Gregory Z. Gutin, Dániel Marx, Ulrike Stege:
07281 Open Problems -- Structure Theory and FPT Algorithmcs for Graphs, Digraphs and Hypergraphs. Structure Theory and FPT Algorithmics for Graphs, Digraphs and Hypergraphs 2007 - 2006
- [j5]Iris van Rooij, Alissa Schactman, Helena Kadlec, Ulrike Stege:
Perceptual or Analytical Processing? Evidence from Children's and Adult's Performance on the Euclidean Traveling Salesperson Problem. J. Probl. Solving 1(1) (2006) - [c11]Allan E. Scott, Ulrike Stege, Norbert Zeh:
Politician's Firefighting. ISAAC 2006: 608-617 - [c10]Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upton:
A New Algorithm for Fast All-Against-All Substring Matching. SPIRE 2006: 360-366 - 2005
- [j4]Jochen Alber, Hongbing Fan, Michael R. Fellows, Henning Fernau, Rolf Niedermeier, Frances A. Rosamond, Ulrike Stege:
A refined search tree technique for Dominating Set on planar graphs. J. Comput. Syst. Sci. 71(4): 385-405 (2005) - 2004
- [c9]Michael R. Fellows, Christian Knauer, Naomi Nishimura, Prabhakar Ragde, Frances A. Rosamond, Ulrike Stege, Dimitrios M. Thilikos, Sue Whitesides:
Faster Fixed-Parameter Tractable Algorithms for Matching and Packing Problems. ESA 2004: 311-322 - 2003
- [j3]Michael R. Fellows, Michael T. Hallett, Ulrike Stege:
Analogs & duals of the MAST problem for sequences & trees. J. Algorithms 49(1): 192-216 (2003) - [j2]James Cheetham, Frank K. H. A. Dehne, Andrew Rau-Chaplin, Ulrike Stege, Peter J. Taillon:
Solving large FPT problems on coarse-grained parallel machines. J. Comput. Syst. Sci. 67(4): 691-706 (2003) - [c8]James Cheetham, Frank K. H. A. Dehne, Andrew Rau-Chaplin, Ulrike Stege, Peter J. Taillon:
A Parallel FPT Application For Clusters. CCGRID 2003: 70-77 - 2002
- [c7]Ulrike Stege, Iris van Rooij, Alexander Hertel, Philipp Hertel:
An O(pn + 1.151p)-Algorithm for p-Profit Cover and Its Practical Implications for Vertex Cover. ISAAC 2002: 249-261 - 2001
- [c6]Jochen Alber, Hongbing Fan, Michael R. Fellows, Henning Fernau, Rolf Niedermeier, Frances A. Rosamond, Ulrike Stege:
Refined Search Tree Technique for DOMINATING SET on Planar Graphs. MFCS 2001: 111-122 - 2000
- [c5]Michael R. Fellows, Catherine McCartin, Frances A. Rosamond, Ulrike Stege:
Coordinatized Kernels and Catalytic Reductions: An Improved FPT Algorithm for Max Leaf Spanning Tree and Other Problems. FSTTCS 2000: 240-251
1990 – 1999
- 1999
- [j1]Rodney G. Downey, Michael R. Fellows, Ulrike Stege:
Computational Tractability: The View From Mars. Bull. EATCS 69: 73-97 (1999) - [c4]Ulrike Stege:
Gene Trees and Species Trees: The Gene-Duplication Problem in Fixed-Parameter Tractable. WADS 1999: 288-293 - 1998
- [c3]Michael R. Fellows, Michael T. Hallett, Chantal Korostensky, Ulrike Stege:
Analogs and Duals of the MAST Problem for Sequences and Trees. ESA 1998: 103-114 - [c2]Michael R. Fellows, Michael T. Hallett, Ulrike Stege:
On the Multiple Gene Duplication Problem. ISAAC 1998: 347-356 - 1997
- [c1]Rodney G. Downey, Michael R. Fellows, Ulrike Stege:
Parameterized complexity: A framework for systematically confronting computational intractability. Contemporary Trends in Discrete Mathematics 1997: 49-99
Coauthor Index
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