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ORCIDSándor Pongor
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2020 – today
- 2022
[j39]István Z. Reguly
, Dávid Csercsik, János Juhász, Kálmán Tornai, Zsófia Bujtár, Gergely Horváth, Bence Keömley-Horváth, Tamás Kós, György Cserey, Kristóf Iván, Sándor Pongor, Gábor Szederkényi, Gergely Röst, Attila Csikász-Nagy:
Microsimulation based quantitative analysis of COVID-19 management strategies. PLoS Comput. Biol. 18(1) (2022)- 2021
- [j38]Ádám Nagy, Balázs Ligeti, János Szebeni, Sándor Pongor, Balazs Györffy:
COVIDOUTCOME - estimating COVID severity based on mutation signatures in the SARS-CoV-2 genome. Database J. Biol. Databases Curation 2021 (2021)
2010 – 2019
- 2019
- [j37]Ágnes Osz, Lorinc Sándor Pongor, Danuta Szirmai, Balazs Györffy:
A snapshot of 3649 Web-based services published between 1994 and 2017 shows a decrease in availability after 2 years. Briefings Bioinform. 20(3): 1004-1010 (2019) - [j36]Roberto Vera Alvarez, Lorinc Sándor Pongor, Leonardo Mariño-Ramírez, David Landsman:
TPMCalculator: one-step software to quantify mRNA abundance of genomic features. Bioinform. 35(11): 1960-1962 (2019) - 2015
- [j35]Arnold Kuzniar, Somdutta Dhir, Harm Nijveen, Sándor Pongor, Jack A. M. Leunissen:
Multi-netclust: an efficient tool for finding connected clusters in multi-parametric networks. Bioinform. 31(19): 3240 (2015) - 2014
- [j34]Attila Kertész-Farkas, Beáta Reiz, Roberto Vera, Michael P. Myers, Sándor Pongor:
PTMTreeSearch: a novel two-stage tree-search algorithm with pruning rules for the identification of post-translational modification of proteins in MS/MS spectra. Bioinform. 30(2): 234-241 (2014) - 2013
- [j33]Jingchu Luo, Harm Nijveen, Teresa K. Attwood, David Phillip Judge, Sándor Pongor, David Landsman, Martin J. Bishop:
Obituary: In memory of Jack Leunissen. Briefings Bioinform. 14(3): 261-262 (2013) - [j32]Roberto Vera, Yasset Pérez-Riverol, Sonia Pérez, Balázs Ligeti, Attila Kertész-Farkas, Sándor Pongor:
JBioWH: an open-source Java framework for bioinformatics data integration. Database J. Biol. Databases Curation 2013 (2013) - [j31]Beáta Reiz, Attila Kertész-Farkas, Sándor Pongor, Michael P. Myers:
Chemical rule-based filtering of MS/MS spectra. Bioinform. 29(7): 925-932 (2013) - [j30]Vladimir A. Kuznetsov, Hwee Kuan Lee, Sebastian Maurer-Stroh, Maria Judit Molnár, Sándor Pongor, Birgit Eisenhaber, Frank Eisenhaber:
How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health. Health Inf. Sci. Syst. 1(1): 2 (2013) - [c6]Balázs Ligeti, Roberto Vera, Gergely Lukács, Balazs Györffy, Sándor Pongor:
Predicting effective drug combinations via network propagation. BioCAS 2013: 378-381 - 2012
- [j29]Dora Bihary, Adam Kerenyi, Zsolt Gelencsér, Sergiu Netotea, Attila Kertész-Farkas, Vittorio Venturi, Sándor Pongor:
Simulation of communication and cooperation in multispecies bacterial communities with an agent based model. Scalable Comput. Pract. Exp. 13(1) (2012) - [j28]Zsolt Gelencsér, Kumari Sonal Choudhary, Bruna Goncalves Coutinho, Sanjarbek Hudaiberdiev, Borisz Galbáts, Vittorio Venturi, Sándor Pongor:
Classifying the Topology of AHL-Driven Quorum Sensing Circuits in Proteobacterial Genomes. Sensors 12(5): 5432-5444 (2012) - 2011
- [c5]Attila Kertész-Farkas, Beáta Reiz, Michael P. Myers, Sándor Pongor:
PTMSearch: A Greedy Tree Traversal Algorithm for Finding Protein Post-Translational Modifications in Tandem Mass Spectra. ECML/PKDD (2) 2011: 162-176 - [c4]Beáta Reiz, Sándor Pongor:
Psychologically Inspired, Rule-Based Outlier Detection in Noisy Data. SYNASC 2011: 131-136 - 2010
- [j27]Arnold Kuzniar, Somdutta Dhir, Harm Nijveen, Sándor Pongor, Jack A. M. Leunissen:
Multi-netclust: an efficient tool for finding connected clusters in multi-parametric networks. Bioinform. 26(19): 2482-2483 (2010)
2000 – 2009
- 2009
- [j26]Arnold Kuzniar, Ke Lin, Ying He, Harm Nijveen, Sándor Pongor, Jack A. M. Leunissen:
ProGMap: an integrated annotation resource for protein orthology. Nucleic Acids Res. 37(Web-Server-Issue): 428-434 (2009) - 2008
- [j25]Paolo Sonego, András Kocsor, Sándor Pongor:
ROC analysis: applications to the classification of biological sequences and 3D structures. Briefings Bioinform. 9(3): 198-209 (2008) - [j24]Annamária F. Ángyán, András Perczel, Sándor Pongor, Zoltán Gáspári:
Fast protein fold estimation from NMR-derived distance restraints. Bioinform. 24(2): 272-275 (2008) - [c3]Dino Franklin, Somdutta Dhir, Sándor Pongor:
Analysis of Kernel Based Protein Classification Strategies Using Pairwise Sequence Alignment Measures. CIBB 2008: 222-231 - [p1]Róbert Busa-Fekete, András Kocsor, Sándor Pongor:
Tree-Based Algorithms for Protein Classification. Computational Intelligence in Bioinformatics 2008: 165-182 - 2007
- [j23]Paolo Sonego, Mircea Pacurar, Somdutta Dhir, Attila Kertész-Farkas, András Kocsor, Zoltán Gáspári, Jack A. M. Leunissen, Sándor Pongor:
A Protein Classification Benchmark collection for machine learning. Nucleic Acids Res. 35(Database-Issue): 232-236 (2007) - [c2]Attila Kertész-Farkas, András Kocsor, Sándor Pongor:
Equivalence Learning in Protein Classification. MLDM 2007: 824-837 - 2006
- [j22]András Kocsor, Attila Kertész-Farkas, László Kaján, Sándor Pongor:
Application of compression-based distance measures to protein sequence classification: a methodological study. Bioinform. 22(4): 407-412 (2006) - [j21]László Kaján, Attila Kertész-Farkas, Dino Franklin, Neli Ivanova, András Kocsor, Sándor Pongor:
Application of a simple likelihood ratio approximant to protein sequence classification. Bioinform. 22(23): 2865-2869 (2006) - 2005
- [j20]Zoltán Gáspári, Kristian Vlahovicek, Sándor Pongor:
Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm. Bioinform. 21(15): 3322-3323 (2005) - [j19]Vilmos Ágoston, Masa Cemazar, László Kaján, Sándor Pongor:
Graph-representation of oxidative folding pathways. BMC Bioinform. 6: 19 (2005) - [j18]Kristian Vlahovicek, László Kaján, Vilmos Ágoston, Sándor Pongor:
The SBASE domain sequence resource, release 12: prediction of protein domain-architecture using support vector machines. Nucleic Acids Res. 33(Database-Issue): 223-225 (2005) - [j17]Kristian Vlahovicek, Alessandro Pintar, Laavanya Parthasarathi, Oliviero Carugo, Sándor Pongor:
CX, DPX and PRIDE: WWW servers for the analysis and comparison of protein 3D structures. Nucleic Acids Res. 33(Web-Server-Issue): 252-254 (2005) - 2003
- [j16]Alessandro Pintar, Oliviero Carugo, Sándor Pongor:
DPX: for the analysis of the protein core. Bioinform. 19(2): 313-314 (2003) - [j15]Endre Barta, László Kaján, Sándor Pongor:
IS: a web-site for intron statistics. Bioinform. 19(4): 543 (2003) - [j14]Kristian Vlahovicek, László Kaján, János Murvai, Zoltán Hegeds, Sándor Pongor:
The SBASE domain sequence library, release 10: domain architecture prediction. Nucleic Acids Res. 31(1): 403-405 (2003) - [j13]Kristian Vlahovicek, László Kaján, Sándor Pongor:
DNA analysis servers: plot.it, bend.it, model.it and IS. Nucleic Acids Res. 31(13): 3686-3687 (2003) - 2002
- [j12]Alessandro Pintar, Oliviero Carugo, Sándor Pongor:
CX, an algorithm that identifies protruding atoms in proteins. Bioinform. 18(7): 980-984 (2002) - [j11]Kristian Vlahovicek, János Murvai, Endre Barta, Sándor Pongor:
The SBASE protein domain library, release 9.0: an online resource for protein domain identification. Nucleic Acids Res. 30(1): 273-275 (2002) - 2001
- [j10]János Murvai, Kristian Vlahovicek, Endre Barta, Sándor Pongor:
The SBASE protein domain library, release 8.0: a collection of annotated protein sequence segments. Nucleic Acids Res. 29(1): 58-60 (2001) - 2000
- [j9]Kristian Vlahovicek, Sándor Pongor:
model.it : building three dimensional DNA models from sequence data. Bioinform. 16(11): 1044-1045 (2000) - [j8]János Murvai, Kristian Vlahovicek, Sándor Pongor:
A simple probabilistic scoring method for protein domain identification. Bioinform. 16(12): 1155-1156 (2000) - [j7]János Murvai, Kristian Vlahovicek, Endre Barta, Bruno Cataletto, Sándor Pongor:
The SBASE protein domain library, release 7.0: a collection of annotated protein sequence segments. Nucleic Acids Res. 28(1): 260-262 (2000)
1990 – 1999
- 1999
- [j6]János Murvai, Kristian Vlahovicek, Endre Barta, Subbiah Parthasarathy, Hedvig Hegyi, Friedhelm Pfeiffer, Sándor Pongor:
The domain-server: direct prediction of protein domain-homologies from BLAST search. Bioinform. 15(4): 343-344 (1999) - [j5]János Murvai, Kristian Vlahovicek, Endre Barta, Csaba Szepesvári, Cristina Acatrinei, Sándor Pongor:
The SBASE protein domain library, release 6.0: a collection of annotated protein sequence segments. Nucleic Acids Res. 27(1): 257-259 (1999) - 1997
- [j4]Péter Fábián, János Murvai, Zsolt Hátsági, Kristian Vlahovicek, Hedvig Hegyi, Sándor Pongor:
The SBASE protein domain library, release 5.0: a collection of annotated protein sequence segments. Nucleic Acids Res. 25(1): 240-243 (1997) - 1996
- [j3]János Murvai, Andrei E. Gabrielian, Péter Fábián, Zsolt Hátsági, Kirill Degtyarenko, Hedvig Hegyi, Sándor Pongor:
The SBASE protein domain library, Release 4.0: a collection of annotated protein sequence segments. Nucleic Acids Res. 24(1): 210-213 (1996) - 1994
- [c1]Zsolt Hátsági, Vesna Skerl, Sándor Pongor:
Protein Motifs: Towards a Unified View on Databases. HICSS (5) 1994: 255-264 - 1993
- [j2]Hedvig Hegyi, Sándor Pongor:
Predicting potential domain homologies from FASTA search results. Comput. Appl. Biosci. 9(3): 371-372 (1993) - [j1]Sándor Pongor, Vesna Skerl, Miklós Cserzo, Zsolt Hátsági, György J. Simon, Valeria Bevilacqua:
The SBASE protein domain library, release 2.0: a collection of annotated protein sequence segments. Nucleic Acids Res. 21(13): 3111-3115 (1993)
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