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Shamim Nemati
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- affiliation: Emory University, Atlanta, GA, USA
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2020 – today
- 2024
- [j19]Vishal Nagarajan, Supreeth Prajwal Shashikumar, Atul Malhotra, Shamim Nemati, Gabriel Wardi:
Impact of wearable device data and multi-scale entropy analysis on improving hospital readmission prediction. J. Am. Medical Informatics Assoc. 31(11): 2679-2688 (2024) - [j18]Aaron Boussina, Supreeth P. Shashikumar, Atul Malhotra, Robert L. Owens, Robert El-Kareh, Christopher A. Longhurst, Kimberly Quintero, Allison Donahue, Theodore C. Chan, Shamim Nemati, Gabriel Wardi:
Impact of a deep learning sepsis prediction model on quality of care and survival. npj Digit. Medicine 7(1) (2024) - [j17]Aaron Boussina, Supreeth P. Shashikumar, Atul Malhotra, Robert L. Owens, Robert El-Kareh, Christopher A. Longhurst, Kimberly Quintero, Allison Donahue, Theodore C. Chan, Shamim Nemati, Gabriel Wardi:
Author Correction: Impact of a deep learning sepsis prediction model on quality of care and survival. npj Digit. Medicine 7(1) (2024) - [c40]Anwesh Mohanty, Supreeth P. Shashikumar, Jonathan Y. Lam, Shamim Nemati:
Improving Prediction of Need for Mechanical Ventilation using Cross-Attention. EMBC 2024: 1-4 - [c39]Yang Qiu, Anwesh Mohanty, Robert L. Owens, Shamim Nemati:
Development of a Voice-Enabled Automated Sleep Survey System. EMBC 2024: 1-4 - [i8]Ayse S. Cakmak, Erik Reinertsen, Shamim Nemati, Gari D. Clifford:
Benchmarking changepoint detection algorithms on cardiac time series. CoRR abs/2404.12408 (2024) - [i7]Anwesh Mohanty, Supreeth P. Shashikumar, Jonathan Y. Lam, Shamim Nemati:
Improving Prediction of Need for Mechanical Ventilation using Cross-Attention. CoRR abs/2407.15885 (2024) - 2023
- [j16]Chao Yu, Jiming Liu, Shamim Nemati, Guosheng Yin:
Reinforcement Learning in Healthcare: A Survey. ACM Comput. Surv. 55(2): 5:1-5:36 (2023) - [c38]Fatemeh Amrollahi, Supreeth Prajwal Shashikumar, Aaron Boussina, Haben Yhdego, Arshia Nayebnazar, Nathan Yung, Gabriel Wardi, Shamim Nemati:
Predicting Hospital Readmission among Patients with Sepsis Using Clinical and Wearable Data. EMBC 2023: 1-4 - [c37]Aaron Boussina, Supreeth P. Shashikumar, Fatemeh Amrollahi, Hayden Pour, Michael A. Hogarth, Shamim Nemati:
Development & Deployment of a Real-time Healthcare Predictive Analytics Platform. EMBC 2023: 1-4 - [c36]Jonathan Y. Lam, John T. Kanegaye, Ellen Xu, Michael A. Gardiner, Jane C. Burns, Shamim Nemati, Adriana H. Tremoulet:
A Deep Learning Framework for Image-Based Screening of Kawasaki Disease. EMBC 2023: 1-4 - [c35]Supreeth P. Shashikumar, Fatemeh Amrollahi, Shamim Nemati:
Unsupervised Detection and Correction of Model Calibration Shift at Test-Time. EMBC 2023: 1-4 - 2022
- [j15]Fatemeh Amrollahi, Supreeth Prajwal Shashikumar, Angela Meier, Lucila Ohno-Machado, Shamim Nemati, Gabriel Wardi:
Inclusion of social determinants of health improves sepsis readmission prediction models. J. Am. Medical Informatics Assoc. 29(7): 1263-1270 (2022) - [c34]Jejo D. Koola, David Laub, Shamim Nemati, Robert El-Kareh:
Identifying Diagnostic Opportunities Using Clinical Trajectories. AMIA 2022 - [c33]Jonathan Y. Lam, Andrew Richardson, Adriana H. Tremoulet, John Kanegaye, Chisato Shimizu, Nicole Stadnick, Jane C. Burns, Shamim Nemati, Michael A. Gardiner:
Implementation of KIDMATCH: A Clinical Decision Support Tool for Diagnosing Pediatric Patients with Multisystem Inflammatory Syndrome and Kawasaki Disease. AMIA 2022 - [c32]Archil K. Srivastava, Supreeth P. Shashikumar, Shamim Nemati:
A Comparison of Uncertainty Estimation Methods for Deep Learning-based Clinical Risk Scores. AMIA 2022 - 2021
- [j14]Supreeth P. Shashikumar, Christopher Josef, Ashish Sharma, Shamim Nemati:
DeepAISE - An interpretable and recurrent neural survival model for early prediction of sepsis. Artif. Intell. Medicine 113: 102036 (2021) - [j13]Azade Tabaie, Evan W. Orenstein, Shamim Nemati, Rajit K. Basu, Swaminathan Kandaswamy, Gari D. Clifford, Rishikesan Kamaleswaran:
Predicting presumed serious infection among hospitalized children on central venous lines with machine learning. Comput. Biol. Medicine 132: 104289 (2021) - [j12]Supreeth P. Shashikumar, Gabriel Wardi, Atul Malhotra, Shamim Nemati:
Artificial intelligence sepsis prediction algorithm learns to say "I don't know". npj Digit. Medicine 4 (2021) - [j11]Zifan Jiang, Sahar Harati, Andrea Crowell, Helen S. Mayberg, Shamim Nemati, Gari D. Clifford:
Classifying Major Depressive Disorder and Response to Deep Brain Stimulation Over Time by Analyzing Facial Expressions. IEEE Trans. Biomed. Eng. 68(2): 664-672 (2021) - [i6]Salman Seyedi, Li Xiong, Shamim Nemati, Gari D. Clifford:
An Analysis Of Protected Health Information Leakage In Deep-Learning Based De-Identification Algorithms. CoRR abs/2101.12099 (2021) - 2020
- [j10]Sahar Harati, Andrea Crowell, Yijian Huang, Helen S. Mayberg, Shamim Nemati:
Classifying Depression Severity in Recovery From Major Depressive Disorder via Dynamic Facial Features. IEEE J. Biomed. Health Informatics 24(3): 815-824 (2020) - [c31]Fatemeh Amrollahi, Supreeth P. Shashikumar, Fereshteh Razmi, Shamim Nemati:
Contextual Embeddings from Clinical Notes Improves Prediction of Sepsis. AMIA 2020 - [c30]Sally L. Baxter, Adam R. Klie, Bharanidharan Radha Saseendrakumar, Gordon Y. Ye, Michael A. Hogarth, Shamim Nemati:
Predicting Mortality in Critical Care Patients with Fungemia Using Structured and Unstructured Data. EMBC 2020: 5459-5463 - [c29]Fatemeh Amrollahi, Supreeth Prajwal Shashikumar, Pradeeban Kathiravelu, Ashish Sharma, Shamim Nemati:
AIDEx - An Open-source Platform for Real-Time Forecasting Sepsis and A Case Study on Taking ML Algorithms to Production. EMBC 2020: 5610-5614 - [c28]Sahar Harati, Andrea Crowell, Helen S. Mayberg, Shamim Nemati:
Addressing the Credit Assignment Problem in Treatment Outcome Prediction Using Temporal DifferenceLearning. PSB 2020: 43-54
2010 – 2019
- 2019
- [c27]Azade Tabaie, Shamim Nemati, Jason Allen, Charlotte Chung, Flavia Queiroga, Won-Jun Kuk, Adam Prater:
Assessing Contribution of Higher Order Clinical Risk Factors to Prediction of Outcome in Aneurysmal Subarachnoid Hemorrhage Patients. AMIA 2019 - [c26]Matthew A. Reyna, Christopher Josef, Salman Seyedi, Russell Jeter, Supreeth P. Shashikumar, M. Brandon Westover, Ashish Sharma, Shamim Nemati, Gari D. Clifford:
Early Prediction of Sepsis from Clinical Data: the PhysioNet/Computing in Cardiology Challenge 2019. CinC 2019: 1-4 - [i5]Russell J. Bradford, Christopher J. Sangwin, Supreeth P. Shashikumar, Shamim Nemati:
Does the "Artificial Intelligence Clinician" learn optimal treatment strategies for sepsis in intensive care? CoRR abs/1902.03271 (2019) - [i4]Supreeth P. Shashikumar, Christopher Josef, Ashish Sharma, Shamim Nemati:
DeepAISE - An End-to-End Development and Deployment of a Recurrent Neural Survival Model for Early Prediction of Sepsis. CoRR abs/1908.04759 (2019) - [i3]Chao Yu, Jiming Liu, Shamim Nemati:
Reinforcement Learning in Healthcare: A Survey. CoRR abs/1908.08796 (2019) - 2018
- [j9]Li-Wei H. Lehman, Roger G. Mark, Shamim Nemati:
A Model-Based Machine Learning Approach to Probing Autonomic Regulation From Nonstationary Vital-Sign Time Series. IEEE J. Biomed. Health Informatics 22(1): 56-66 (2018) - [c25]Mohammad M. Ghassemi, Tuka Al Hanai, M. Brandon Westover, Roger G. Mark, Shamim Nemati:
Personalized Medication Dosing Using Volatile Data Streams. AAAI Workshops 2018: 435-442 - [c24]Sapoonjyoti Duttaduwarah, Ganesh R. Iyer, Shamim Nemati, Ashish Sharma:
DataScope - Enabling Scientific Mashups for Data Exploration, Hypothesis Generation, and Visual Analytics from Large Biomedical and Clinical Datasets. AMIA 2018 - [c23]Azade Tabaie, Falgun H. Chokshi, Andre L. Holder, Shamim Nemati:
Doubly-Robust Estimation of Effect of Imaging Resource Utilization on Discharge Decisions in Emergency Departments. EMBC 2018: 3256-3259 - [c22]Mohammad M. Ghassemi, Tuka Al Hanai, Jesse Daniel Raffa, Roger G. Mark, Shamim Nemati, Falgun H. Chokshi:
How is the Doctor Feeling? ICU Provider Sentiment is Associated with Diagnostic Imaging Utilization. EMBC 2018: 4058-4064 - [c21]Joel R. Henry, Dennis Lynch, Jeff Mals, Supreeth P. Shashikumar, Andre L. Holder, Ashish Sharma, Shamim Nemati:
A FHIR-Enabled Streaming Sepsis Prediction System for ICUs. EMBC 2018: 4093-4096 - [c20]Rongmei Lin, Matthew D. Stanley, Mohammad M. Ghassemi, Shamim Nemati:
A Deep Deterministic Policy Gradient Approach to Medication Dosing and Surveillance in the ICU. EMBC 2018: 4927-4931 - [c19]Sahar Harati, Andrea Crowell, Helen S. Mayberg, Shamim Nemati:
Depression Severity Classification from Speech Emotion. EMBC 2018: 5763-5766 - [c18]Supreeth Prajwal Shashikumar, Amit J. Shah, Gari D. Clifford, Shamim Nemati:
Detection of Paroxysmal Atrial Fibrillation using Attention-based Bidirectional Recurrent Neural Networks. KDD 2018: 715-723 - [i2]Supreeth Prajwal Shashikumar, Amit J. Shah, Gari D. Clifford, Shamim Nemati:
Detection of Paroxysmal Atrial Fibrillation using Attention-based Bidirectional Recurrent Neural Networks. CoRR abs/1805.09133 (2018) - 2017
- [j8]Hongteng Xu, Weichang Wu, Shamim Nemati, Hongyuan Zha:
Patient Flow Prediction via Discriminative Learning of Mutually-Correcting Processes. IEEE Trans. Knowl. Data Eng. 29(1): 157-171 (2017) - [c17]Supreeth Prajwal Shashikumar, Amit J. Shah, Qiao Li, Gari D. Clifford, Shamim Nemati:
A deep learning approach to monitoring and detecting atrial fibrillation using wearable technology. BHI 2017: 141-144 - [c16]Hongteng Xu, Weichang Wu, Shamim Nemati, Hongyuan Zha:
Patient Flow Prediction via Discriminative Learning of Mutually-Correcting Processes (Extended Abstract). ICDE 2017: 37-38 - [c15]Lana X. Garmire, Stephen V. Gliske, Quynh C. Nguyen, Jonathan H. Chen, Shamim Nemati, John D. Van Horn, Jason H. Moore, Carol Shreffler, Michelle Dunn:
The Training of Next Generation Data Scientists in Biomedicine. PSB 2017: 640-645 - 2016
- [j7]Alistair E. W. Johnson, Mohammad M. Ghassemi, Shamim Nemati, Katherine E. Niehaus, David A. Clifton, Gari D. Clifford:
Machine Learning and Decision Support in Critical Care. Proc. IEEE 104(2): 444-466 (2016) - [c14]Sahar Harati, Andrea Crowell, Helen S. Mayberg, Jun Kong, Shamim Nemati:
Discriminating clinical phases of recovery from major depressive disorder using the dynamics of facial expression. EMBC 2016: 2254-2257 - [c13]Shamim Nemati, Mohammad M. Ghassemi, Gari D. Clifford:
Optimal medication dosing from suboptimal clinical examples: A deep reinforcement learning approach. EMBC 2016: 2978-2981 - [c12]Shamim Nemati, Mohammad M. Ghassemi, Vaidehi Ambai, Nino Isakadze, Oleksiy Levantsevych, Amit J. Shah, Gari D. Clifford:
Monitoring and detecting atrial fibrillation using wearable technology. EMBC 2016: 3394-3397 - [i1]Hongteng Xu, Weichang Wu, Shamim Nemati, Hongyuan Zha:
ICU Patient Flow Prediction via Discriminative Learning of Mutually-Correcting Processes. CoRR abs/1602.05112 (2016) - 2015
- [j6]Julien Oster, Joachim Behar, Omid Sayadi, Shamim Nemati, Alistair E. W. Johnson, Gari D. Clifford:
Semisupervised ECG Ventricular Beat Classification With Novelty Detection Based on Switching Kalman Filters. IEEE Trans. Biomed. Eng. 62(9): 2125-2134 (2015) - [j5]Li-Wei H. Lehman, Ryan P. Adams, Louis Mayaud, George B. Moody, Atul Malhotra, Roger G. Mark, Shamim Nemati:
A Physiological Time Series Dynamics-Based Approach to Patient Monitoring and Outcome Prediction. IEEE J. Biomed. Health Informatics 19(3): 1068-1076 (2015) - [c11]Mohammad Mahdi Ghassemi, Roger G. Mark, Shamim Nemati:
A Visualization of Evolving Clinical Sentiment Using Vector Representations of Clinical Notes. CinC 2015: 629-632 - [c10]Li-Wei H. Lehman, Shamim Nemati, Roger G. Mark:
Hemodynamic Monitoring Using Switching Autoregressive Dynamics of Multivariate Vital Sign Time Series. CinC 2015: 1065-1068 - [c9]Li-Wei H. Lehman, Mohammad M. Ghassemi, Jasper Snoek, Shamim Nemati:
Patient Prognosis from Vital Sign Time Series: Combining Convolutional Neural Networks with a Dynamical Systems Approach. CinC 2015: 1069-1072 - 2014
- [c8]Shamim Nemati, Mohammad M. Ghassemi:
A fast and memory-efficient algorithm for learning and retrieval of phenotypic dynamics in multivariate cohort time series. IEEE BigData 2014: 41-44 - [c7]Mohammad M. Ghassemi, Li-Wei H. Lehman, Jasper Snoek, Shamim Nemati:
Global Optimization Approaches for Parameter Tuning in Biomedical Signal Processing: A Focus of Multi-scale Entropy. CinC 2014: 993-996 - [c6]Li-Wei H. Lehman, Shamim Nemati, George B. Moody, Thomas Heldt, Roger G. Mark:
Uncovering Clinical Significance of Vital Sign Dynamics in Critical Care. CinC 2014: 1141-1144 - 2013
- [b1]Shamim Nemati:
Identifying evolving multivariate dynamics in individual and cohort time series, with application to physiological control systems. Massachusetts Institute of Technology, Cambridge, MA, USA, 2013 - [c5]Li-Wei H. Lehman, Shamim Nemati, Ryan P. Adams, George B. Moody, Atul Malhotra, Roger G. Mark:
Tracking progression of patient state of health in critical care using inferred shared dynamics in physiological time series. EMBC 2013: 7072-7075 - [c4]Shamim Nemati, Li-Wei H. Lehman, Ryan P. Adams:
Learning outcome-discriminative dynamics in multivariate physiological cohort time series. EMBC 2013: 7104-7107 - 2012
- [c3]Li-Wei H. Lehman, Shamim Nemati, Ryan P. Adams, Roger G. Mark:
Discovering shared dynamics in physiological signals: Application to patient monitoring in ICU. EMBC 2012: 5939-5942 - [c2]Shamim Nemati, Li-Wei H. Lehman, Ryan P. Adams, Atul Malhotra:
Discovering shared cardiovascular dynamics within a patient cohort. EMBC 2012: 6526-6529 - 2011
- [j4]Shamim Nemati, Omar Abdala, Violeta Monasterio, Susie Yim-Yeh, Atul Malhotra, Gari D. Clifford:
A Nonparametric Surrogate-Based Test of Significance for T-Wave Alternans Detection. IEEE Trans. Biomed. Eng. 58(5): 1356-1364 (2011) - 2010
- [j3]Shamim Nemati, Atul Malhotra, Gari D. Clifford:
Data Fusion for Improved Respiration Rate Estimation. EURASIP J. Adv. Signal Process. 2010 (2010)
2000 – 2009
- 2009
- [j2]Mark B. Yeary, Shamim Nemati, Tian-You Yu, Yadong Wang, Yan Zhai:
A Support-Vector-Machine-Based Approach to RF Sensor Spectral Signature Classifications. IEEE Trans. Instrum. Meas. 58(1): 221-228 (2009) - 2007
- [j1]Mark Yeary, Shamim Nemati, Tian-You Yu, Yadong Wang:
Tornadic Time-Series Detection Using Eigen Analysis and a Machine Intelligence-Based Approach. IEEE Geosci. Remote. Sens. Lett. 4(3): 335-339 (2007) - 2006
- [c1]Yan Zhai, Mark B. Yeary, Jean-Charles Noyer, Joseph P. Havlicek, Shamim Nemati, Patrick Lanvin:
Visual Target Tracking using Improved and Computationally Efficient Particle Filtering. ICIP 2006: 1757-1760
Coauthor Index
aka: Mohammad Mahdi Ghassemi
aka: Supreeth Prajwal Shashikumar
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