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ORCIDAnna Bernasconi 0002
Person information
- affiliation: Politecnico di Milano, Italy
Other persons with the same name
- Anna Bernasconi 0001
![[0000-0003-0263-5221]](https://dblp.uni-trier.de/img/orcid-mark.12x12.png "0000-0003-0263-5221")
— Università di Pisa, Italy
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2020 – today
- 2025
[e3]Motoshi Saeki, Leah Wong, João Araújo, Clara Ayora, Anna Bernasconi, Matteo Buffa, Silvana Castano, Peter Fettke, Hans-Georg Fill, Alberto García S., Miguel Goulão, Cristine Griffo, Jin-Taek Jung, Julius Köpke, Beatriz Marín, Stefano Montanelli, Edelweis Rohrer, José F. Reyes Román:
Advances in Conceptual Modeling - ER 2024 Workshops, AISA, CMLS, EmpER, QUAMES, JUSMOD, LLM4Modeling, Pittsburgh, PA, USA, October 28-31, 2024, Proceedings. Lecture Notes in Computer Science 14932, Springer 2025, ISBN 978-3-031-75598-9 [contents]- 2024
- [j19]Francesco Invernici, Anna Bernasconi, Stefano Ceri:
Exploring the evolution of research topics during the COVID-19 pandemic. Expert Syst. Appl. 252: 124028 (2024) - [c31]Anna Bernasconi, Matteo Chiara, Tommaso Alfonsi, Stefano Ceri:
SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics. CAiSE Research Projects Exhibition 2024: 18-25 - [c30]Anna Bernasconi, Francesco Invernici, Stefano Ceri:
TETYS: Towards the Next-Generation Open-Source Web Topic Explorer. CAiSE Research Projects Exhibition 2024: 26-33 - [c29]Lorenzo Bertetto, Francesca Bettinelli, Alessio Buda, Marco Da Mommio, Simone Di Bari, Claudio Savelli, Elena Baralis, Anna Bernasconi, Luca Cagliero, Stefano Ceri, Francesco Pierri:
Towards an Explorable Conceptual Map of Large Language Models. CAiSE Forum 2024: 82-90 - [c28]Mireia Costa, Alberto García S., Anna Bernasconi, Stefano Ceri, Oscar Pastor:
A Conceptual Approach to using Relevant Patterns in Genomic Data Analysis. ER (Companion) 2024: 15-28 - [c27]Stefano Ceri, Anna Bernasconi, Alessia Gagliardi:
Reactive Knowledge Management. ICDE 2024: 5574-5582 - [c26]Luigi Bellomarini, Anna Bernasconi, Stefano Ceri, Alessia Gagliardi, Davide Magnanimi, Davide Martinenghi:
Towards a Standard for Triggers in Property Graphs. SEBD 2024: 70-79 - [c25]Stefano Ceri, Anna Bernasconi, Alessia Gagliardi, Davide Martinenghi, Luigi Bellomarini, Davide Magnanimi:
PG-Triggers: Triggers for Property Graphs. SIGMOD Conference Companion 2024: 373-385 - [d8]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 3.3.3-v3. Zenodo, 2024 [all versions]
- [d7]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 4. Zenodo, 2024 [all versions] - [d6]Andrea Colombo, Anna Bernasconi, Stefano Ceri:
Italian Legislative Property Graph. Zenodo, 2024 - [i7]Andrea Colombo, Anna Bernasconi, Stefano Ceri:
Modelling Legislative Systems into Property Graphs to Enable Advanced Pattern Detection. CoRR abs/2406.14935 (2024) - [i6]Francesco Cambria, Francesco Invernici, Anna Bernasconi, Stefano Ceri:
MINE GRAPH RULE: A New Cypher-like Operator for Mining Association Rules on Property Graphs. CoRR abs/2406.19106 (2024) - 2023
- [b2]Anna Bernasconi:
Model, Integrate, Search... Repeat - A Sound Approach to Building Integrated Repositories of Genomic Data. Lecture Notes in Business Information Processing 496, Springer 2023, ISBN 978-3-031-44906-2, pp. 1-236 - [j18]Pietro Pinoli, Arif Canakoglu, Stefano Ceri, Matteo Chiara, Erika Ferrandi, Luca Minotti, Anna Bernasconi:
VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants. Database J. Biol. Databases Curation 2023 (2023) - [j17]Anna Bernasconi, Alberto García S., Stefano Ceri, Oscar Pastor:
PoliViews: A comprehensive and modular approach to the conceptual modeling of genomic data. Data Knowl. Eng. 147: 102201 (2023) - [j16]Elizabeth A. Heron, Giorgio Valle, Anna Bernasconi:
Editorial: Identification of phenotypically important genomic variants. Frontiers Bioinform. 3 (2023) - [j15]Alberto García S., Anna Bernasconi, Giancarlo Guizzardi, Oscar Pastor, Veda C. Storey, José Ignacio Panach:
Assessing the value of ontologically unpacking a conceptual model for human genomics. Inf. Syst. 118: 102242 (2023) - [c24]Anna Bernasconi, Alberto García Simón, Giancarlo Guizzardi, Luiz Olavo Bonino da Silva Santos, Veda C. Storey:
Ontological Representation of FAIR Principles: A Blueprint for FAIRer Data Sources. CAiSE 2023: 261-277 - [c23]Mireia Costa, Alberto García S., Ana León, Anna Bernasconi, Oscar Pastor:
A Reference Meta-model to Understand DNA Variant Interpretation Guidelines. ER 2023: 375-393 - [c22]Ruba Al Khalaf, Anna Bernasconi, Alberto García S.:
OntoEffect: An OntoUML-Based Ontology to Explain SARS-CoV-2 Variants' Effects. KEOD 2023: 62-72 - [c21]Anna Bernasconi:
The Opportunity of Data-Driven Services for Viral Genomic Surveillance. SOSE 2023: 172-181 - [e2]Giuseppe Agapito, Anna Bernasconi, Cinzia Cappiello, Hasan Ali Khattak, In-Young Ko, Giuseppe Loseto, Michael Mrissa, Luca Nanni, Pietro Pinoli, Azzurra Ragone, Michele Ruta, Floriano Scioscia, Abhishek Srivastava:
Current Trends in Web Engineering - ICWE 2022 International Workshops, BECS, SWEET and WALS, Bari, Italy, July 5-8, 2022, Revised Selected Papers. Communications in Computer and Information Science 1668, Springer 2023, ISBN 978-3-031-25379-9 [contents] - [d5]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 3.3.3. Zenodo, 2023 [all versions] - [d4]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 3.3.3-v2. Zenodo, 2023 [all versions] - [d3]Giuseppe Serna Garcia, Ruba Al Khalaf, Francesco Invernici, Anna Bernasconi, Stefano Ceri:
Supporting data for "CoVEffect: Interactive System for Mining the Effects of SARS-CoV-2 Mutations and Variants Based on Deep Learning". Zenodo, 2023 - [i5]Alessia Gagliardi, Anna Bernasconi, Davide Martinenghi, Stefano Ceri:
PG-Triggers: Triggers for Property Graphs. CoRR abs/2307.07354 (2023) - [i4]Francesco Invernici, Anna Bernasconi, Stefano Ceri:
Exploring the evolution of research topics during the COVID-19 pandemic. CoRR abs/2310.03928 (2023) - [i3]Francesco Invernici, Anna Bernasconi, Stefano Ceri:
Searching COVID-19 clinical research using graphical abstracts. CoRR abs/2310.04094 (2023) - 2022
- [j14]Giuseppe Serna Garcia, Michele Leone, Anna Bernasconi, Mark J. Carman:
GeMI: interactive interface for transformer-based Genomic Metadata Integration. Database J. Biol. Databases Curation 2022(2022) (2022) - [j13]Luca Cilibrasi, Pietro Pinoli, Anna Bernasconi, Arif Canakoglu, Matteo Chiara, Stefano Ceri:
ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time. Bioinform. 38(7): 1988-1994 (2022) - [j12]Tommaso Alfonsi, Anna Bernasconi, Arif Canakoglu, Marco Masseroli:
Genomic data integration and user-defined sample-set extraction for population variant analysis. BMC Bioinform. 23(1): 401 (2022) - [j11]Anna Bernasconi, Giancarlo Guizzardi, Oscar Pastor, Veda C. Storey:
Semantic interoperability: ontological unpacking of a viral conceptual model. BMC Bioinform. 23-S(11): 491 (2022) - [j10]Pietro Crovari, Sara Pidò, Pietro Pinoli, Anna Bernasconi, Arif Canakoglu, Franca Garzotto, Stefano Ceri:
GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis. ACM Trans. Comput. Heal. 3(1): 3:1-3:29 (2022) - [j9]Anna Bernasconi, Arif Canakoglu, Marco Masseroli, Stefano Ceri:
META-BASE: A Novel Architecture for Large-Scale Genomic Metadata Integration. IEEE ACM Trans. Comput. Biol. Bioinform. 19(1): 543-557 (2022) - [c20]Alberto García S., Giancarlo Guizzardi, Oscar Pastor, Veda C. Storey, Anna Bernasconi:
An Ontological Characterization of a Conceptual Model of the Human Genome. CAiSE Forum 2022: 27-35 - [c19]Anna Bernasconi, Pietro Pinoli:
Conceptual models and databases for searching the genome. EDBT 2022: 1-4 - [c18]Alberto García S., Anna Bernasconi, Giancarlo Guizzardi, Oscar Pastor, Veda C. Storey, Mireia Costa:
An Initial Empirical Assessment of an Ontological Model of the Human Genome. ER (Workshops) 2022: 55-65 - [c17]Anna Bernasconi, Alberto García S., Stefano Ceri, Oscar Pastor:
A Comprehensive Approach for the Conceptual Modeling of Genomic Data. ER 2022: 194-208 - [c16]Anna Bernasconi:
A Sound and Repeatable Approach to Building Integrated Repositories of Genomic Data. itaDATA 2022: 212-213 - [c15]Tommaso Alfonsi, Luigi Bellomarini, Anna Bernasconi, Stefano Ceri:
Expressing Biological Problems with Logical Reasoning Languages. RuleML+RR (Companion) 2022 - [e1]Davide Chicco, Angelo M. Facchiano, Erica Tavazzi, Enrico Longato, Martina Vettoretti, Anna Bernasconi, Simone Avesani, Paolo Cazzaniga:
Computational Intelligence Methods for Bioinformatics and Biostatistics - 17th International Meeting, CIBB 2021, Virtual Event, November 15-17, 2021, Revised Selected Papers. Lecture Notes in Computer Science 13483, Springer 2022, ISBN 978-3-031-20836-2 [contents] - 2021
- [b1]Anna Bernasconi:
Model, integrate, search... repeat: a sound approach to building integrated repositories of genomic data. Polytechnic University of Milan, Italy, 2021 - [j8]Anna Bernasconi, Arif Canakoglu, Marco Masseroli, Stefano Ceri:
The road towards data integration in human genomics: players, steps and interactions. Briefings Bioinform. 22(1): 30-44 (2021) - [j7]Anna Bernasconi, Arif Canakoglu, Marco Masseroli, Pietro Pinoli, Stefano Ceri:
A review on viral data sources and search systems for perspective mitigation of COVID-19. Briefings Bioinform. 22(2): 664-675 (2021) - [j6]Anna Bernasconi, Luca Cilibrasi, Ruba Al Khalaf, Tommaso Alfonsi, Stefano Ceri, Pietro Pinoli, Arif Canakoglu:
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species. Database J. Biol. Databases Curation 2021 (2021) - [j5]Claudio Menghi, Alessandro Maria Rizzi, Anna Bernasconi, Paola Spoletini:
TOrPEDO: witnessing model correctness with topological proofs. Formal Aspects Comput. 33(6): 1039-1066 (2021) - [j4]Anna Bernasconi, Silvia Grandi:
A Conceptual Model for Geo-Online Exploratory Data Visualization: The Case of the COVID-19 Pandemic. Inf. 12(2): 69 (2021) - [j3]Arif Canakoglu, Pietro Pinoli, Anna Bernasconi, Tommaso Alfonsi, Damianos P. Melidis, Stefano Ceri:
ViruSurf: an integrated database to investigate viral sequences. Nucleic Acids Res. 49(Database-Issue): D817-D824 (2021) - [c14]Giancarlo Guizzardi, Anna Bernasconi, Oscar Pastor, Veda C. Storey:
Ontological Unpacking as Explanation: The Case of the Viral Conceptual Model. ER 2021: 356-366 - [c13]Ruba Al Khalaf, Tommaso Alfonsi, Stefano Ceri, Anna Bernasconi:
CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts. RCIS 2021: 274-282 - [c12]Anna Bernasconi:
Extreme Requirements Elicitation: Lessons Learnt from the COVID-19 Case Study. REFSQ Workshops 2021 - [d2]Anna Bernasconi, Lorenzo Mari, Renato Casagrandi, Stefano Ceri:
Analysis of amino acid change dynamics reveals SARS-CoV-2 variant emergence. Zenodo, 2021 - 2020
- [c11]Anna Bernasconi, Arif Canakoglu, Pietro Pinoli, Stefano Ceri:
Empowering Virus Sequence Research Through Conceptual Modeling. ER 2020: 388-402 - [c10]Claudio Menghi, Alessandro Maria Rizzi, Anna Bernasconi:
Integrating Topological Proofs with Model Checking to Instrument Iterative Design. FASE 2020: 53-74 - [c9]Giuseppe Cannizzaro, Michele Leone, Anna Bernasconi, Arif Canakoglu, Mark J. Carman:
Automated Integration of Genomic Metadata with Sequence-to-Sequence Models. ECML/PKDD (5) 2020: 187-203 - [d1]Fabio Cumbo, Eleonora Cappelli, Anna Bernasconi, Arif Canakoglu, Stefano Ceri, Marco Masseroli, Emanuel Weitschek:
OpenGDC. Zenodo, 2020
2010 – 2019
- 2019
- [j2]Arif Canakoglu, Anna Bernasconi, Andrea Colombo, Marco Masseroli, Stefano Ceri:
GenoSurf: metadata driven semantic search system for integrated genomic datasets. Database J. Biol. Databases Curation 2019: baz132 (2019) - [j1]Marco Masseroli, Arif Canakoglu, Pietro Pinoli, Abdulrahman Kaitoua, Andrea Gulino, Olha Horlova, Luca Nanni, Anna Bernasconi, Stefano Perna, Eirini Stamoulakatou, Stefano Ceri:
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data. Bioinform. 35(5): 729-736 (2019) - [c8]Marzia Settino, Anna Bernasconi, Gaia Ceddia, Giuseppe Agapito, Marco Masseroli, Mario Cannataro:
Using GMQL-Web for Querying, Downloading and Integrating Public with Private Genomic Datasets. BCB 2019: 688-693 - [c7]Anna Bernasconi, Arif Canakoglu, Stefano Ceri:
Exploiting Conceptual Modeling for Searching Genomic Metadata: A Quantitative and Qualitative Empirical Study. ER Workshops 2019: 83-94 - [c6]Anna Bernasconi, Arif Canakoglu, Stefano Ceri:
From a Conceptual Model to a Knowledge Graph for Genomic Datasets. ER 2019: 352-360 - [r3]Anna Bernasconi, Marco Masseroli:
Biological and Medical Ontologies: Disease Ontology (DO). Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 838-847 - [r2]Anna Bernasconi, Marco Masseroli:
Biological and Medical Ontologies: Human Phenotype Ontology (HPO). Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 848-857 - [r1]Anna Bernasconi, Marco Masseroli:
Biological and Medical Ontologies: Systems Biology Ontology (SBO). Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 858-866 - 2018
- [c5]Anna Bernasconi:
Using Metadata for Locating Genomic Datasets on a Global Scale. CIKM Workshops 2018 - [c4]Anna Bernasconi, Arif Canakoglu, Andrea Colombo, Stefano Ceri:
Ontology-driven metadata enrichment for genomic datasets. SWAT4LS 2018 - [i2]Claudio Menghi, Alessandro Maria Rizzi, Anna Bernasconi:
Integrating Topological Proofs with Model Checking to Instrument Iterative Design. CoRR abs/1811.11123 (2018) - 2017
- [c3]Anna Bernasconi, Stefano Ceri, Alessandro Campi, Marco Masseroli:
Conceptual Modeling for Genomics: Building an Integrated Repository of Open Data. ER 2017: 325-339 - [c2]Stefano Ceri, Anna Bernasconi, Arif Canakoglu, Andrea Gulino, Abdulrahman Kaitoua, Marco Masseroli, Luca Nanni, Pietro Pinoli:
Overview of GeCo: A Project for Exploring and Integrating Signals from the Genome. DAMDID/RCDL (Selected Papers) 2017: 46-57 - [c1]Anna Bernasconi, Claudio Menghi, Paola Spoletini, Lenore D. Zuck, Carlo Ghezzi:
From Model Checking to a Temporal Proof for Partial Models. SEFM 2017: 54-69 - [i1]Anna Bernasconi, Claudio Menghi, Paola Spoletini, Lenore D. Zuck, Carlo Ghezzi:
From model checking to a temporal proof for partial models: preliminary example. CoRR abs/1706.02701 (2017)
Coauthor Index
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