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ORCIDThe R Journal, Volume 9
Volume 9, Number 1, 2017
- Taylor B. Arnold, Michael J. Kane, Simon Urbanek
:
iotools: High-Performance I/O Tools for R. 6 - Martin Otava, Rudradev Sengupta, Ziv Shkedy, Dan Lin, Setia Pramana, Tobias Verbeke, Philippe Haldermans, Ludwig A. Hothorn, Daniel Gerhard, Rebecca M. Kuiper, Florian Klinglmueller, Adetayo Kasim:
IsoGeneGUI: Multiple Approaches for Dose-Response Analysis of Microarray Data Using R. 14 - Sam Tyner, François Briatte, Heike Hofmann:
Network Visualization with ggplot2. 27 - Mark Pickup, Paul Gustafson, Davor Cubranic, Geoffrey Evans:
OrthoPanels: An R Package for Estimating a Dynamic Panel Model with Fixed Effects Using the Orthogonal Reparameterization Approach. 60 - Randall Pruim, Daniel T. Kaplan, Nicholas J. Horton:
The mosaic Package: Helping Students to Think with Data Using R. 77 - Jakob Bossek:
smoof: Single- and Multi-Objective Optimization Test Functions. 103 - Daniel Osório, Janneth González, Andrés Pinzón Velasco:
minval: An R package for MINimal VALidation of Stoichiometric Reactions. 114 - G. Brooke Anderson, Colin Eason, Elizabeth A. Barnes:
Working with Daily Climate Model Output Data in R and the futureheatwaves Package. 124 - Sean S. Downey, Guowei Sun, Peter Norquest:
alineR: an R Package for Optimizing Feature-Weighted Alignments and Linguistic Distances. 138 - Jim Duggan:
Implementing a Metapopulation Bass Diffusion Model using the R Package deSolve. 153 - Christian Margreitter, Chris Oostenbrink:
MDplot: Visualise Molecular Dynamics. 164 - Luca Scrucca:
On Some Extensions to GA Package: Hybrid Optimisation, Parallelisation and Islands EvolutionOn some extensions to GA package: hybrid optimisation, parallelisation and islands evolution. 187 - Steffen Moritz, Thomas Bartz-Beielstein:
imputeTS: Time Series Missing Value Imputation in R. 207 - Pablo Morales-Álvarez, Julián Luengo, Luís Paulo F. Garcia, Ana Carolina Lorena, André C. P. L. F. de Carvalho, Francisco Herrera:
The NoiseFiltersR Package: Label Noise Preprocessing in R. 219 - Razieh Nabi, Xiaogang Su:
coxphMIC: An R Package for Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criteria. 229 - Simon H. Heisterkamp, Engelbertus van Willigen, Paul-Matthias Diderichsen, John Maringwa:
Update of the nlme Package to Allow a Fixed Standard Deviation of the Residual Error. 239 - Hye-Min Choe, Mijeong Kim, Eun-Kyung Lee:
EMSaov: An R Package for the Analysis of Variance with the Expected Mean Squares and its Shiny Application. 252 - Mónica López-Ratón, Elisa M. Molanes-Lopez, Emilio Letón, Carmen Cadarso-Suárez:
GsymPoint: An R Package to Estimate the Generalized Symmetry Point, an Optimal Cut-off Point for Binary Classification in Continuous Diagnostic Tests. 262 - Joshua P. French:
autoimage: Multiple Heat Maps for Projected Coordinates. 284 - Thomas Wieland:
Market Area Analysis for Retail and Service Locations with MCI. 298 - Neeraj Bokde, Gualberto Asencio-Cortés, Francisco Martínez-Álvarez, Kishore Kulat:
PSF: Introduction to R Package for Pattern Sequence Based Forecasting Algorithm. 324 - Adrien Mazoyer, Rémy Drouilhet, Stéphane Despréaux, Bernard Ycart:
flan: An R Package for Inference on Mutation Models. 334 - Philipp Probst, Quay Au, Giuseppe Casalicchio, Clemens Stachl, Bernd Bischl:
Multilabel Classification with R Package mlr. 352 - Mingli Chen, Victor Chernozhukov, Iván Fernández-Val, Blaise Melly:
Counterfactual: An R Package for Counterfactual Analysis. 370 - Leo Lahti, Janne Huovari, Markus Kainu, Przemyslaw Biecek:
Retrieval and Analysis of Eurostat Open Data with the eurostat Package. 385 - Gul Inan, Lan Wang:
PGEE: An R Package for Analysis of Longitudinal Data with High-Dimensional Covariates. 393 - Panagiotis Papastamoulis, Magnus Rattray:
BayesBinMix: an R Package for Model Based Clustering of Multivariate Binary Data. 403 - Brandon M. Greenwell:
pdp: An R Package for Constructing Partial Dependence Plots. 421 - Michel Lang:
checkmate: Fast Argument Checks for Defensive R Programming. 437 - Ping-Yang Chen, Ching-Chuan Chen, Chun-Hao Yang, Sheng-Mao Chang, Kuo-Jung Lee:
milr: Multiple-Instance Logistic Regression with Lasso Penalty. 446 - Axel Gandy, Jan Terje Kvaløy:
spcadjust: An R Package for Adjusting for Estimation Error in Control Charts. 458 - Rense Nieuwenhuis, Manfred te Grotenhuis, Ben Pelzer:
Weighted Effect Coding for Observational Data with wec. 477 - G. Brooke Anderson, Dirk Eddelbuettel:
Hosting Data Packages via drat: A Case Study with Hurricane Exposure Data. 486
Volume 9, Number 2, 2017
- Heather M. Savoy, Falk Heße, Yoram Rubin:
anchoredDistr: a Package for the Bayesian Inversion of Geostatistical Parameters with Multi-type and Multi-scale Data. 6 - Nicolae Teodor Melita, Stefan Holban:
dGAselID: An R Package for Selecting a Variable Number of Features in High Dimensional Data. 18 - Nathan Medina-Rodríguez, Ángelo Santana:
Allele Imputation and Haplotype Determination from Databases Composed of Nuclear Families. 35 - Patrick Breheny, Woodrow Burchett:
Visualization of Regression Models Using visreg. 56 - Guillermo Basulto-Elias, Alicia L. Carriquiry, Kris De Brabanter, Daniel J. Nordman:
fourierin: An R package to compute Fourier integrals. 72 - Giorgio Alfredo Spedicato:
Discrete Time Markov Chains with R. 84 - Mélanie Prague, Rui Wang, Victor De Gruttola:
CRTgeeDR: an R Package for Doubly Robust Generalized Estimating Equations Estimations in Cluster Randomized Trials with Missing Data. 105 - Pedro Cañadilla Jiménez, Yolanda Román-Montoya:
queueing: A Package For Analysis Of Queueing Networks and Models in R. 116 - Marius Pfeuffer:
ctmcd: An R Package for Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data. 127 - Tyson S. Barrett, Emily Brignone:
Furniture for Quantitative Scientists. 142 - Nicholas Syring, Meng Li:
BayesBD: An R Package for Bayesian Inference on Image Boundaries. 149 - Michael Hahsler:
arulesViz: Interactive Visualization of Association Rules with R. 163 - Xuwen Zhu, Volodymyr Melnykov:
ManlyMix: An R Package for Manly Mixture Modeling. 176 - Aurélie Siberchicot, Alice Julien-Laferrière, Anne-Béatrice Dufour, Jean Thioulouse, Stéphane Dray:
adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data. 198 - Chao Wang, Kung-Sik Chan:
carx: an R Package to Estimate Censored Autoregressive Time Series with Exogenous Covariates. 213 - Muhammad Imdadullah, Muhammad Aslam, Saima Altaf:
liureg: A Comprehensive R Package for the Liu Estimation of Linear Regression Model with Collinear Regressors. 232 - Taylor B. Arnold:
A Tidy Data Model for Natural Language Processing using cleanNLP. 248 - Josmar Mazucheli, André Felipe Berdusco Menezes, Saralees Nadarajah:
mle.tools: An R Package for Maximum Likelihood Bias Correction. 268 - Rafael Benítez, Vicente J. Bolós, José Luis Toca-Herrera:
afmToolkit: an R Package for Automated AFM Force-Distance Curves Analysis. 291 - Pablo J. Villacorta:
The welchADF Package for Robust Hypothesis Testing in Unbalanced Multivariate Mixed Models with Heteroscedastic and Non-normal Data. 309 - Hideitsu Hino:
ider: Intrinsic Dimension Estimation with R. 329 - Annabel Allison, Ian R. White, Simon Bond:
rpsftm: An R Package for Rank Preserving Structural Failure Time Models. 342 - Robert J. Gutierrez, Bradley C. Boehmke, Kenneth W. Bauer Jr., Cade M. Saie, Trevor J. Bihl:
anomalyDetection: Implementation of Augmented Network Log Anomaly Detection Procedures. 354 - Ruby Sharma, Sajal Kumar, Hua Zhong, Mingzhou Song:
Simulating Noisy, Nonparametric, and Multivariate Discrete Patterns. 366 - Mollie E. Brooks, Kasper Kristensen, Koen J. van Benthem, Arni Magnusson, Casper W. Berg, Anders Nielsen, Hans J. Skaug, Martin Mächler, Benjamin M. Bolker:
glmmTMB Balances Speed and Flexibility Among Packages for Zero-inflated Generalized Linear Mixed Modeling. 378 - Christopher Gandrud, Laron K. Williams:
Simulating Probabilistic Long-Term Effects in Models with Temporal Dependence. 401 - Jannes Muenchow, Patrick Schratz, Alexander Brenning:
RQGIS: Integrating R with QGIS for Statistical Geocomputing. 409 - Robin K. S. Hankin:
Partial Rank Data with the hyper2 Package: Likelihood Functions for Generalized Bradley-Terry Models. 429 - Brice Ozenne, Anne Lyngholm Sørensen, Thomas Scheike, Christian Torp-Pedersen, Thomas Alexander Gerds:
riskRegression: Predicting the Risk of an Event using Cox Regression Models. 440 - Mirta Bensic, Petar Taler, Safet Hamedovic, Emmanuel Karlo Nyarko, Kristian Sabo:
LeArEst: Length and Area Estimation from Data Measured with Additive Error. 461 - Andreas Beger, Daniel W. Hill Jr., Nils W. Metternich, Shahryar Minhas, Michael D. Ward:
Splitting It Up: The spduration Split-Population Duration Regression Package for Time-Varying Covariates. 474 - Clifford Anderson-Bergman:
Bayesian Regression Models for Interval-censored Data in R. 487 - Travis Canida, John Ihrie:
openEBGM: An R Implementation of the Gamma-Poisson Shrinker Data Mining Model. 499 - David J. Winter:
rentrez: An R package for the NCBI eUtils API. 520 - Carl Boettiger, Dirk Eddelbuettel:
An Introduction to Rocker: Docker Containers for R. 527
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