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ORCIDKatherine A. Yelick
Kathy Yelick
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- affiliation: University of California, Berkeley, USA
- award: ACM Athena Lecturer 2013
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2020 – today
- 2024
[j33]Steven A. Hofmeyr
, Aydin Buluç, Robert Riley, Rob Egan, Oguz Selvitopi, Leonid Oliker, Katherine A. Yelick, Migun Shakya, Brett Youtsey, Ariful Azad:
Exabiome: Advancing Microbial Science through Exascale Computing. Comput. Sci. Eng. 26(2): 8-15 (2024)- [j32]Michael Christ, James Demmel, Nicholas Knight, Thomas Scanlon, Katherine A. Yelick:
On Multilinear Inequalities of Holder-Brascamp-Lieb Type for Torsion-Free Discrete Abelian Groups. J. Log. Anal. 16 (2024) - [c133]Ujjaini Mukhopadhyay, Alok Tripathy, Oguz Selvitopi, Katherine A. Yelick, Aydin Buluç:
Sparsity-Aware Communication for Distributed Graph Neural Network Training. ICPP 2024: 117-126 - [c132]Benjamin Brock, Aydin Buluç, Katherine A. Yelick:
RDMA-Based Algorithms for Sparse Matrix Multiplication on GPUs. ICS 2024: 225-235 - [c131]Alok Tripathy, Katherine A. Yelick, Aydin Buluç:
Distributed Matrix-Based Sampling for Graph Neural Network Training. MLSys 2024 - 2023
- [c130]Hunter McCoy, Steven A. Hofmeyr, Katherine A. Yelick, Prashant Pandey:
Singleton Sieving: Overcoming the Memory/Speed Trade-Off in Exascale κ-mer Analysis. ACDA 2023: 213-224 - [c129]Doru-Thom Popovici, Muaaz Gul Awan, Giulia Guidi, Rob Egan, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick:
Designing Efficient SIMD Kernels for High Performance Sequence Alignment. IPDPS Workshops 2023: 167-176 - [c128]Hunter McCoy, Steven A. Hofmeyr, Katherine A. Yelick, Prashant Pandey:
High-Performance Filters for GPUs. PPoPP 2023: 160-173 - [i24]Oguz Selvitopi, Saliya Ekanayake, Giulia Guidi, Muaaz G. Awan, Georgios A. Pavlopoulos, Ariful Azad, Nikos Kyrpides, Leonid Oliker, Katherine A. Yelick, Aydin Buluç:
Extreme-scale many-against-many protein similarity search. CoRR abs/2303.01845 (2023) - [i23]Alok Tripathy, Katherine A. Yelick, Aydin Buluç:
Distributed Matrix-Based Sampling for Graph Neural Network Training. CoRR abs/2311.02909 (2023) - [i22]Benjamin Brock, Aydin Buluç, Katherine A. Yelick:
RDMA-Based Algorithms for Sparse Matrix Multiplication on GPUs. CoRR abs/2311.18141 (2023) - 2022
- [c127]Yuxin Chen, Benjamin Brock, Serban D. Porumbescu, Aydin Buluç, Katherine A. Yelick, John D. Owens:
Atos: A Task-Parallel GPU Scheduler for Graph Analytics. ICPP 2022: 50:1-50:11 - [c126]Giulia Guidi, Gabriel Raulet, Daniel Rokhsar, Leonid Oliker, Katherine A. Yelick, Aydin Buluç:
Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. ICPP 2022: 82:1-82:11 - [c125]Oguz Selvitopi, Saliya Ekanayake, Giulia Guidi, Muaaz G. Awan, Georgios A. Pavlopoulos, Ariful Azad, Nikos Kyrpides, Leonid Oliker, Katherine A. Yelick, Aydin Buluç:
Extreme-Scale Many-against-Many Protein Similarity Search. SC 2022: 1:1-1:12 - [c124]Yuxin Chen, Benjamin Brock, Serban D. Porumbescu, Aydin Buluç, Katherine A. Yelick, John D. Owens:
Scalable Irregular Parallelism with GPUs: Getting CPUs Out of the Way. SC 2022: 50:1-50:16 - [i21]Giulia Guidi, Gabriel Raulet, Daniel Rokhsar, Leonid Oliker, Katherine A. Yelick, Aydin Buluç:
Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. CoRR abs/2207.04350 (2022) - [i20]Hunter McCoy, Steven A. Hofmeyr, Katherine A. Yelick, Prashant Pandey:
High-Performance Filters For GPUs. CoRR abs/2212.09005 (2022) - 2021
- [c123]Giulia Guidi, Marquita Ellis, Daniel Rokhsar, Katherine A. Yelick, Aydin Buluç:
BELLA: Berkeley Efficient Long-Read to Long-Read Aligner and Overlapper. ACDA 2021: 123-134 - [c122]Marquita Ellis, Aydin Buluç, Katherine A. Yelick:
Scaling Generalized N-Body Problems, A Case Study from Genomics. ICPP 2021: 64:1-64:9 - [c121]Oguz Selvitopi, Benjamin Brock, Israt Nisa, Alok Tripathy, Katherine A. Yelick, Aydin Buluç:
Distributed-memory parallel algorithms for sparse times tall-skinny-dense matrix multiplication. ICS 2021: 431-442 - [c120]Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç:
Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. IPDPS 2021: 517-526 - [c119]Israt Nisa, Prashant Pandey, Marquita Ellis, Leonid Oliker, Aydin Buluç, Katherine A. Yelick:
Distributed-Memory k-mer Counting on GPUs. IPDPS 2021: 527-536 - [c118]Marquita Ellis, Aydin Buluç, Katherine A. Yelick:
Asynchrony versus bulk-synchrony for a generalized N-body problem from genomics. PPoPP 2021: 465-466 - [c117]Ed Younis, Koushik Sen, Katherine A. Yelick, Costin Iancu:
QFAST: Conflating Search and Numerical Optimization for Scalable Quantum Circuit Synthesis. QCE 2021: 232-243 - [c116]Muaaz Gul Awan, Steven A. Hofmeyr, Rob Egan, Nan Ding, Aydin Buluç, Jack Deslippe, Leonid Oliker, Katherine A. Yelick:
Accelerating large scale de novo metagenome assembly using GPUs. SC 2021: 7 - [c115]Guy E. Blelloch, William J. Dally, Margaret Martonosi, Uzi Vishkin, Katherine A. Yelick:
SPAA'21 Panel Paper: Architecture-Friendly Algorithms versus Algorithm-Friendly Architectures. SPAA 2021: 1-7 - [c114]Giulia Guidi, Marquita Ellis, Aydin Buluç, Katherine A. Yelick, David E. Culler:
10 Years Later: Cloud Computing is Closing the Performance Gap. ICPE (Companion) 2021: 41-48 - [c113]Michael L. Norman, Vince Kellen, Shava Smallen, Brian DeMeulle, Shawn Strande, Ed Lazowska, Naomi Alterman, Rob Fatland, Sarah Stone, Amanda Tan, Katherine A. Yelick, Eric Van Dusen, James Mitchell:
CloudBank: Managed Services to Simplify Cloud Access for Computer Science Research and Education. PEARC 2021: 45:1-45:4 - [i19]Yuxin Chen, Benjamin Brock, Serban D. Porumbescu, Aydin Buluç, Katherine A. Yelick, John D. Owens:
Atos: A Task-Parallel GPU Dynamic Scheduling Framework for Dynamic Irregular Computations. CoRR abs/2112.00132 (2021) - 2020
- [j31]Muaaz G. Awan, Jack Deslippe, Aydin Buluç, Oguz Selvitopi, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick:
ADEPT: a domain independent sequence alignment strategy for gpu architectures. BMC Bioinform. 21(1): 406 (2020) - [j30]Meredith M. Lee, Alicia D. Johnson, Katherine A. Yelick, Jennifer T. Chayes:
The Road for Recovery: Aligning COVID-19 efforts and building a more resilient future. IEEE Data Eng. Bull. 43(2): 133-140 (2020) - [c112]Katherine A. Yelick:
Computing and Data Challenges in Climate Change. HiPC 2020: xix - [c111]Francesco Peverelli, Lorenzo Di Tucci, Marco D. Santambrogio, Nan Ding, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
GPU accelerated partial order multiple sequence alignment for long reads self-correction. IPDPS Workshops 2020: 174-182 - [c110]Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. IPDPS 2020: 462-471 - [c109]Taylor L. Groves, Ben Brock, Yuxin Chen, Khaled Z. Ibrahim, Lenny Oliker, Nicholas J. Wright, Samuel Williams, Katherine A. Yelick:
Performance Trade-offs in GPU Communication: A Study of Host and Device-initiated Approaches. PMBS@SC 2020: 126-137 - [c108]Alok Tripathy, Katherine A. Yelick, Aydin Buluç:
Reducing communication in graph neural network training. SC 2020: 70 - [i18]Katherine A. Yelick, Aydin Buluç, Muaaz G. Awan, Ariful Azad, Benjamin Brock, Rob Egan, Saliya Ekanayake, Marquita Ellis, Evangelos Georganas, Giulia Guidi, Steven A. Hofmeyr, Oguz Selvitopi, Cristina Teodoropol, Leonid Oliker:
The Parallelism Motifs of Genomic Data Analysis. CoRR abs/2001.06989 (2020) - [i17]Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
diBELLA: Distributed Long Read to Long Read Alignment. CoRR abs/2001.10049 (2020) - [i16]Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. CoRR abs/2002.05200 (2020) - [i15]Alok Tripathy, Katherine A. Yelick, Aydin Buluç:
Reducing Communication in Graph Neural Network Training. CoRR abs/2005.03300 (2020) - [i14]Gregory D. Hager, Mark D. Hill, Katherine A. Yelick:
Opportunities and Challenges for Next Generation Computing. CoRR abs/2008.00023 (2020) - [i13]Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç:
Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. CoRR abs/2010.10055 (2020) - [i12]Nicolas Swenson, Aditi S. Krishnapriyan, Aydin Buluç, Dmitriy Morozov, Katherine A. Yelick:
PersGNN: Applying Topological Data Analysis and Geometric Deep Learning to Structure-Based Protein Function Prediction. CoRR abs/2010.16027 (2020) - [i11]Giulia Guidi, Marquita Ellis, Aydin Buluç, Katherine A. Yelick, David E. Culler:
10 Years Later: Cloud Computing is Closing the Performance Gap. CoRR abs/2011.00656 (2020)
2010 – 2019
- 2019
- [c107]Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
diBELLA: Distributed Long Read to Long Read Alignment. ICPP 2019: 70:1-70:11 - [c106]Benjamin Brock, Aydin Buluç, Katherine A. Yelick:
BCL: A Cross-Platform Distributed Data Structures Library. ICPP 2019: 102:1-102:10 - [c105]Benjamin A. Brock, Yuxin Chen, Jiakun Yan, John D. Owens, Aydin Buluç, Katherine A. Yelick:
RDMA vs. RPC for Implementing Distributed Data Structures. IA3@SC 2019: 17-22 - [i10]Benjamin Brock, Yuxin Chen, Jiakun Yan, John D. Owens, Aydin Buluç, Katherine A. Yelick:
RDMA vs. RPC for Implementing Distributed Data Structures. CoRR abs/1910.02158 (2019) - 2018
- [c104]Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Leonid Oliker, Katherine A. Yelick, Sang-Yun Oh:
Communication-Avoiding Optimization Methods for Distributed Massive-Scale Sparse Inverse Covariance Estimation. AISTATS 2018: 1376-1386 - [c103]Michael B. Driscoll, Benjamin Brock, Frank Ong, Jonathan I. Tamir, Hsiou-Yuan Liu, Michael Lustig, Armando Fox, Katherine A. Yelick:
Indigo: A Domain-Specific Language for Fast, Portable Image Reconstruction. IPDPS 2018: 495-504 - [c102]Katherine A. Yelick:
CHIUW 2018 Keynote. IPDPS Workshops 2018: 895 - [c101]Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
Extreme scale de novo metagenome assembly. SC 2018: 10:1-10:13 - [i9]Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick:
Extreme Scale De Novo Metagenome Assembly. CoRR abs/1809.07014 (2018) - [i8]Benjamin Brock, Aydin Buluç, Katherine A. Yelick:
BCL: A Cross-Platform Distributed Container Library. CoRR abs/1810.13029 (2018) - 2017
- [c100]Marquita Ellis, Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick:
Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems. Euro-Par 2017: 79-91 - [c99]Evangelos Georganas, Marquita Ellis, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick:
MerBench: PGAS Benchmarks for High Performance Genome Assembly. PAW@SC 2017: 5:1-5:4 - [i7]Evangelos Georganas, Steven A. Hofmeyr, Rob Egan, Aydin Buluç, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick:
Extreme-Scale De Novo Genome Assembly. CoRR abs/1705.11147 (2017) - [i6]Vasant G. Honavar, Katherine A. Yelick, Klara Nahrstedt, Holly E. Rushmeier, Jennifer Rexford, Mark D. Hill, Elizabeth Bradley, Elizabeth D. Mynatt:
Advanced Cyberinfrastructure for Science, Engineering, and Public Policy. CoRR abs/1707.00599 (2017) - [i5]Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Sang-Yun Oh, Leonid Oliker, Katherine A. Yelick:
Communication-Avoiding Optimization Methods for Massive-Scale Graphical Model Structure Learning. CoRR abs/1710.10769 (2017) - 2016
- [c98]David Ozog, Amir Kamil, Yili Zheng, Paul Hargrove, Jeff R. Hammond, Allen D. Malony, Wibe de Jong, Kathy Yelick:
A Hartree-Fock Application Using UPC++ and the New DArray Library. IPDPS 2016: 453-462 - [c97]Penporn Koanantakool, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Sang-Yun Oh, Leonid Oliker, Katherine A. Yelick:
Communication-Avoiding Parallel Sparse-Dense Matrix-Matrix Multiplication. IPDPS 2016: 842-853 - [i4]Vasant G. Honavar, Mark D. Hill, Katherine A. Yelick:
Accelerating Science: A Computing Research Agenda. CoRR abs/1604.02006 (2016) - [i3]Mathias Jacquelin, Yili Zheng, Esmond Ng, Katherine A. Yelick:
An Asynchronous Task-based Fan-Both Sparse Cholesky Solver. CoRR abs/1608.00044 (2016) - [i2]Mark D. Hill, Sarita V. Adve, Luis Ceze, Mary Jane Irwin, David R. Kaeli, Margaret Martonosi, Josep Torrellas, Thomas F. Wenisch, David A. Wood, Katherine A. Yelick:
21st Century Computer Architecture. CoRR abs/1609.06756 (2016) - 2015
- [c96]Kathy Yelick:
The Endgame for Moore's Law: Architecture, Algorithm, and Application Challenges. FCRC 2015: 6 - [c95]Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick:
merAligner: A Fully Parallel Sequence Aligner. IPDPS 2015: 561-570 - [c94]Scott French, Yili Zheng, Barbara Romanowicz, Katherine A. Yelick:
Parallel Hessian Assembly for Seismic Waveform Inversion Using Global Updates. IPDPS 2015: 753-762 - [c93]Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Steven A. Hofmeyr, Chaitanya Aluru, Rob Egan, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick:
HipMer: an extreme-scale de novo genome assembler. SC 2015: 14:1-14:11 - 2014
- [c92]Khaled Z. Ibrahim, Katherine A. Yelick:
On the conditions for efficient interoperability with threads: an experience with PGAS languages using cray communication domains. ICS 2014: 23-32 - [c91]Yili Zheng, Amir Kamil, Michael B. Driscoll, Hongzhang Shan, Katherine A. Yelick:
UPC++: A PGAS Extension for C++. IPDPS 2014: 1105-1114 - [c90]Khaled Z. Ibrahim, Paul Hargrove, Costin Iancu, Katherine A. Yelick:
An Evaluation of One-Sided and Two-Sided Communication Paradigms on Relaxed-Ordering Interconnect. IPDPS 2014: 1115-1125 - [c89]Hongzhang Shan, Amir Kamil, Samuel Williams, Yili Zheng, Katherine A. Yelick:
Evaluation of PGAS Communication Paradigms with Geometric Multigrid. PGAS 2014: 8:1-8:12 - [c88]Amir Kamil, Yili Zheng, Katherine A. Yelick:
A Local-View Array Library for Partitioned Global Address Space C++ Programs. ARRAY@PLDI 2014: 26-31 - [c87]Penporn Koanantakool, Katherine A. Yelick:
A Computation- and Communication-Optimal Parallel Direct 3-Body Algorithm. SC 2014: 363-374 - [c86]Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick:
Parallel De Bruijn Graph Construction and Traversal for De Novo Genome Assembly. SC 2014: 437-448 - 2013
- [j29]Leonid Oliker, Katherine A. Yelick:
Best paper awards: 26th international parallel and distributed processing symposium (IPDPS 2012). J. Parallel Distributed Comput. 73(7): 986 (2013) - [c85]Michael B. Driscoll, Evangelos Georganas, Penporn Koanantakool, Edgar Solomonik, Katherine A. Yelick:
A Communication-Optimal N-Body Algorithm for Direct Interactions. IPDPS 2013: 1075-1084 - [c84]Amir Kamil, Katherine A. Yelick:
Hierarchical Computation in the SPMD Programming Model. LCPC 2013: 3-19 - [i1]Michael Christ, James Demmel, Nicholas Knight, Thomas Scanlon, Katherine A. Yelick:
Communication lower bounds and optimal algorithms for programs that reference arrays - Part 1. CoRR abs/1308.0068 (2013) - 2012
- [j28]Hongzhang Shan, Nicholas J. Wright, John Shalf, Katherine A. Yelick, Marcus Wagner, Nathan Wichmann:
A preliminary evaluation of the hardware acceleration of the Cray Gemini interconnect for PGAS languages and comparison with MPI. SIGMETRICS Perform. Evaluation Rev. 40(2): 92-98 (2012) - [j27]Kamesh Madduri, Jimmy Su, Samuel Williams, Leonid Oliker, Stéphane Ethier, Katherine A. Yelick:
Optimization of Parallel Particle-to-Grid Interpolation on Leading Multicore Platforms. IEEE Trans. Parallel Distributed Syst. 23(10): 1915-1922 (2012) - [c83]Kathy Yelick:
Compiling to avoid communication. PACT 2012: 157-158 - [c82]Katherine A. Yelick:
Keynote address: Moving a science workload to exascale computing. IISWC 2012: 1 - [c81]Evangelos Georganas, Jorge González-Domínguez, Edgar Solomonik, Yili Zheng, Juan Touriño, Katherine A. Yelick:
Communication avoiding and overlapping for numerical linear algebra. SC 2012: 100 - 2011
- [j26]Jack J. Dongarra, Peter H. Beckman, Terry Moore, Patrick Aerts, Giovanni Aloisio, Jean-Claude Andre, David Barkai, Jean-Yves Berthou, Taisuke Boku, Bertrand Braunschweig, Franck Cappello, Barbara M. Chapman, Xuebin Chi, Alok N. Choudhary, Sudip S. Dosanjh, Thom H. Dunning, Sandro Fiore, Al Geist, Bill Gropp, Robert J. Harrison, Mark Hereld, Michael A. Heroux, Adolfy Hoisie, Koh Hotta, Zhong Jin, Yutaka Ishikawa, Fred Johnson, Sanjay Kale, Richard Kenway, David E. Keyes, Bill Kramer, Jesús Labarta, Alain Lichnewsky, Thomas Lippert, Bob Lucas, Barney Maccabe, Satoshi Matsuoka, Paul Messina, Peter Michielse, Bernd Mohr, Matthias S. Müller, Wolfgang E. Nagel, Hiroshi Nakashima, Michael E. Papka, Daniel A. Reed, Mitsuhisa Sato, Edward Seidel, John Shalf, David Skinner, Marc Snir, Thomas L. Sterling, Rick Stevens, Frederick H. Streitz, Bob Sugar, Shinji Sumimoto, William M. Tang, John A. Taylor, Rajeev Thakur, Anne E. Trefethen, Mateo Valero, Aad J. van der Steen, Jeffrey S. Vetter, Peg Williams, Robert W. Wisniewski, Katherine A. Yelick:
The International Exascale Software Project roadmap. Int. J. High Perform. Comput. Appl. 25(1): 3-60 (2011) - [j25]Rajesh Nishtala, Yili Zheng, Paul Hargrove, Katherine A. Yelick:
Tuning collective communication for Partitioned Global Address Space programming models. Parallel Comput. 37(9): 576-591 (2011) - [j24]David Gay, Joel Galenson, Mayur Naik, Kathy Yelick:
Yada: Straightforward parallel programming. Parallel Comput. 37(9): 592-609 (2011) - [c80]Katherine A. Yelick:
Exascale opportunities and challenges. HPDC 2011: 1-2 - [r1]Katherine A. Yelick, Susan L. Graham, Paul N. Hilfinger, Dan Bonachea, Jimmy Su, Amir Kamil, Kaushik Datta, Phillip Colella, Tong Wen:
Titanium. Encyclopedia of Parallel Computing 2011: 2049-2055 - 2010
- [c79]Filip Blagojevic, Paul Hargrove, Costin Iancu, Katherine A. Yelick:
Hybrid PGAS runtime support for multicore nodes. PGAS 2010: 3 - [p2]Kaushik Datta, Samuel Williams, Vasily Volkov, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick:
Auto-Tuning Stencil Computations on Multicore and Accelerators. Scientific Computing with Multicore and Accelerators 2010: 219-253
2000 – 2009
- 2009
- [j23]Katherine A. Yelick:
Technical perspective - Abstraction for parallelism. Commun. ACM 52(9): 88 (2009) - [j22]Krste Asanovic, Rastislav Bodík, James Demmel, Tony M. Keaveny, Kurt Keutzer, John Kubiatowicz, Nelson Morgan, David A. Patterson, Koushik Sen, John Wawrzynek, David Wessel, Katherine A. Yelick:
A view of the parallel computing landscape. Commun. ACM 52(10): 56-67 (2009) - [j21]Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick:
Optimization of a lattice Boltzmann computation on state-of-the-art multicore platforms. J. Parallel Distributed Comput. 69(9): 762-777 (2009) - [j20]Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel:
Optimization of sparse matrix-vector multiplication on emerging multicore platforms. Parallel Comput. 35(3): 178-194 (2009) - [j19]Kaushik Datta, Shoaib Kamil, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick:
Optimization and Performance Modeling of Stencil Computations on Modern Microprocessors. SIAM Rev. 51(1): 129-159 (2009) - [c78]Joseph Gebis, Leonid Oliker, John Shalf, Samuel Williams, Katherine A. Yelick:
Improving Memory Subsystem Performance Using ViVA: Virtual Vector Architecture. ARCS 2009: 146-158 - [c77]Filip Blagojevic, Costin Iancu, Katherine A. Yelick, Matthew Curtis-Maury, Dimitrios S. Nikolopoulos, Benjamin Rose:
Scheduling dynamic parallelism on accelerators. Conf. Computing Frontiers 2009: 161-170 - [c76]Rajesh Nishtala, Paul Hargrove, Dan Bonachea, Katherine A. Yelick:
Scaling communication-intensive applications on BlueGene/P using one-sided communication and overlap. IPDPS 2009: 1-12 - [c75]Katherine A. Yelick:
Ten ways to waste a parallel computer. ISCA 2009: 1 - [c74]Amir Kamil, Katherine A. Yelick:
Enforcing Textual Alignment of Collectives Using Dynamic Checks. LCPC 2009: 368-382 - [c73]Kamesh Madduri, Samuel Williams, Stéphane Ethier, Leonid Oliker, John Shalf, Erich Strohmaier, Katherine A. Yelick:
Memory-efficient optimization of Gyrokinetic particle-to-grid interpolation for multicore processors. SC 2009 - [c72]Marghoob Mohiyuddin, Mark Hoemmen, James Demmel, Katherine A. Yelick:
Minimizing communication in sparse matrix solvers. SC 2009 - 2008
- [j18]Jack J. Dongarra, Robert B. Graybill, William J. Harrod, Robert F. Lucas, Ewing L. Lusk, Piotr Luszczek, Janice McMahon, Allan Snavely, Jeffrey S. Vetter, Katherine A. Yelick, Sadaf R. Alam, Roy L. Campbell, Laura Carrington, Tzu-Yi Chen, Omid Khalili, Jeremy S. Meredith, Mustafa M. Tikir:
DARPA's HPCS Program- History, Models, Tools, Languages. Adv. Comput. 72: 1-100 (2008) - [c71]Costin Iancu, Wei Chen, Katherine A. Yelick:
Performance portable optimizations for loops containing communication operations. ICS 2008: 266-276 - [c70]James Demmel, Mark Hoemmen, Marghoob Mohiyuddin, Katherine A. Yelick:
Avoiding communication in sparse matrix computations. IPDPS 2008: 1-12 - [c69]Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick:
Lattice Boltzmann simulation optimization on leading multicore platforms. IPDPS 2008: 1-14 - [c68]Katherine A. Yelick:
Programming models for petascale to exascale. IPDPS 2008: 1 - [c67]Kaushik Datta, Mark Murphy, Vasily Volkov, Samuel Williams, Jonathan Carter, Leonid Oliker, David A. Patterson, John Shalf, Katherine A. Yelick:
Stencil computation optimization and auto-tuning on state-of-the-art multicore architectures. SC 2008: 4 - 2007
- [j17]Rajesh Nishtala, Richard W. Vuduc, James Demmel, Katherine A. Yelick:
When cache blocking of sparse matrix vector multiply works and why. Appl. Algebra Eng. Commun. Comput. 18(3): 297-311 (2007) - [j16]Katherine A. Yelick, Paul N. Hilfinger, Susan L. Graham, Dan Bonachea, Jimmy Su, Amir Kamil, Kaushik Datta, Phillip Colella, Tong Wen:
Parallel Languages and Compilers: Perspective From the Titanium Experience. Int. J. High Perform. Comput. Appl. 21(3): 266-290 (2007) - [j15]Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick:
Scientific Computing Kernels on the Cell Processor. Int. J. Parallel Program. 35(3): 263-298 (2007) - [j14]Ewing L. Lusk, Katherine A. Yelick:
Languages for High-Productivity Computing: the DARPA HPCS Language Project. Parallel Process. Lett. 17(1): 89-102 (2007) - [c66]Costin Iancu, Wei Chen, Katherine A. Yelick:
Performance Portable Optimizations for Loops Containing Communication Operations. PACT 2007: 411 - [c65]Wei-Yu Chen, Dan Bonachea, Costin Iancu, Katherine A. Yelick:
Automatic nonblocking communication for partitioned global address space programs. ICS 2007: 158-167 - [c64]Katherine A. Yelick, Dan Bonachea, Wei-Yu Chen, Phillip Colella, Kaushik Datta, Jason Duell, Susan L. Graham, Paul Hargrove, Paul N. Hilfinger, Parry Husbands, Costin Iancu, Amir Kamil, Rajesh Nishtala, Jimmy Su, Michael L. Welcome, Tong Wen:
Productivity and performance using partitioned global address space languages. PASCO 2007: 24-32 - [c63]Jimmy Su, Katherine A. Yelick:
Automatic Communication Performance Debugging in PGAS Languages. LCPC 2007: 232-245 - [c62]Amir Kamil, Katherine A. Yelick:
Hierarchical Pointer Analysis for Distributed Programs. SAS 2007: 281-297 - [c61]Parry Husbands, Katherine A. Yelick:
Multi-threading and one-sided communication in parallel LU factorization. SC 2007: 31 - [c60]Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel:
Optimization of sparse matrix-vector multiplication on emerging multicore platforms. SC 2007: 38 - [c59]Tong Wen, Jimmy Su, Phillip Colella, Katherine A. Yelick, Noel Keen:
An adaptive mesh refinement benchmark for modern parallel programming languages. SC 2007: 40 - [c58]Shivali Agarwal, Rajkishore Barik, Dan Bonachea, Vivek Sarkar, R. K. Shyamasundar, Katherine A. Yelick:
Deadlock-free scheduling of X10 computations with bounded resources. SPAA 2007: 229-240 - [e2]Katherine A. Yelick, John M. Mellor-Crummey:
Proceedings of the 12th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP 2007, San Jose, California, USA, March 14-17, 2007. ACM 2007, ISBN 978-1-59593-602-8 [contents] - 2006
- [j13]Edward Givelberg, Katherine A. Yelick:
Distributed Immersed Boundary Simulation in Titanium. SIAM J. Sci. Comput. 28(4): 1361-1378 (2006) - [c57]Shoaib Kamil, Kaushik Datta, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick:
Implicit and explicit optimizations for stencil computations. Memory System Performance and Correctness 2006: 51-60 - [c56]Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick:
The potential of the cell processor for scientific computing. Conf. Computing Frontiers 2006: 9-20 - [c55]Hongzhang Shan, Ji Qiang, Erich Strohmaier, Katherine A. Yelick:
Performance Analysis of a High Energy Colliding Beam Simulation Code on Four HPC Architectures. ICPP 2006: 237-244 - [c54]Christian Bell, Dan Bonachea, Rajesh Nishtala, Katherine A. Yelick:
Optimizing bandwidth limited problems using one-sided communication and overlap. IPDPS 2006 - [c53]Katherine A. Yelick:
Compilation Techniques for Partitioned Global Address Space Languages. LCPC 2006: 1 - [c52]Katherine A. Yelick:
Performance Advantages of Partitioned Global Address Space Languages. PVM/MPI 2006: 6 - [c51]Hongzhang Shan, Erich Strohmaier, Ji Qiang, David H. Bailey, Katherine A. Yelick:
Particles and contiuum - Performance modeling and optimization of a high energy colliding beam simulation code. SC 2006: 97 - [c50]Dan Bonachea, Paul Hargrove, Rajesh Nishtala, Michael L. Welcome, Katherine A. Yelick:
Poster reception - Optimized collectives for PGAS languages with one-sided communication. SC 2006: 143 - 2005
- [j12]Richard Carl Demmel, Jack J. Dongarra, Victor Eijkhout, Erika Fuentes, Antoine Petitet, Richard W. Vuduc, R. Clint Whaley, Katherine A. Yelick:
Self-Adapting Linear Algebra Algorithms and Software. Proc. IEEE 93(2): 293-312 (2005) - [c49]Shoaib Kamil, Parry Husbands, Leonid Oliker, John Shalf, Katherine A. Yelick:
Impact of modern memory subsystems on cache optimizations for stencil computations. Memory System Performance 2005: 36-43 - [c48]Wei-Yu Chen, Costin Iancu, Katherine A. Yelick:
Communication Optimizations for Fine-Grained UPC Applications. IEEE PACT 2005: 267-278 - [c47]Jimmy Su, Katherine A. Yelick:
Automatic Support for Irregular Computations in a High-Level Language. IPDPS 2005 - [c46]Amir Kamil, Katherine A. Yelick:
Concurrency Analysis for Parallel Programs with Textually Aligned Barriers. LCPC 2005: 185-199 - [c45]Kaushik Datta, Dan Bonachea, Katherine A. Yelick:
Titanium Performance and Potential: An NPB Experimental Study. LCPC 2005: 200-214 - [c44]Katherine A. Yelick:
Language innovations for HPCS. PPoPP 2005: 119 - [c43]Amir Kamil, Jimmy Su, Katherine A. Yelick:
Making Sequential Consistency Practical in Titanium. SC 2005: 15 - [e1]Keshav Pingali, Katherine A. Yelick, Andrew S. Grimshaw:
Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP 2005, June 15-17, 2005, Chicago, IL, USA. ACM 2005, ISBN 1-59593-080-9 [contents] - 2004
- [j11]Katherine A. Yelick:
Special Issue on Automatic Performance Tuning. Int. J. High Perform. Comput. Appl. 18(1): 19 (2004) - [j10]Eun-Jin Im, Katherine A. Yelick, Richard W. Vuduc:
Sparsity: Optimization Framework for Sparse Matrix Kernels. Int. J. High Perform. Comput. Appl. 18(1): 135-158 (2004) - [c42]Benjamin C. Lee, Richard W. Vuduc, James Demmel, Katherine A. Yelick:
Performance Models for Evaluation and Automatic Tuning of Symmetric Sparse Matrix-Vector Multiply. ICPP 2004: 169-176 - [c41]Christian Bell, Wei-Yu Chen, Dan Bonachea, Katherine A. Yelick:
Evaluating support for global address space languages on the Cray X1. ICS 2004: 184-195 - [c40]Gorden Griem, Leonid Oliker, John Shalf, Katherine A. Yelick:
Identifying Performance Bottlenecks on Modern Microarchitectures Using an Adaptable Probe. IPDPS 2004 - [c39]Jimmy Su, Katherine A. Yelick:
Array Prefetching for Irregular Array Accesses in Titanium. IPDPS 2004 - [c38]Eun-Jin Im, Ismail Bustany, Cleve Ashcraft, James Demmel, Katherine A. Yelick:
Performance Tuning of Matrix Triple Products Based on Matrix Structure. PARA 2004: 740-746 - 2003
- [c37]Rich Vuduc, Attila Gyulassy, James Demmel, Katherine A. Yelick:
Memory Hierarchy Optimizations and Performance ounds for Sparse A. International Conference on Computational Science 2003: 705-714 - [c36]Parry Husbands, Costin Iancu, Katherine A. Yelick:
A performance analysis of the Berkeley UPC compiler. ICS 2003: 63-73 - [c35]Christian Bell, Dan Bonachea, Yannick Cote, Jason Duell, Paul Hargrove, Parry Husbands, Costin Iancu, Michael L. Welcome, Katherine A. Yelick:
An Evaluation of Current High-Performance Networks. IPDPS 2003: 28 - [c34]Wei-Yu Chen, Arvind Krishnamurthy, Katherine A. Yelick:
Polynomial-Time Algorithms for Enforcing Sequential Consistency in SPMD Programs with Arrays. LCPC 2003: 340-356 - [c33]Ben Liblit, Alex Aiken, Katherine A. Yelick:
Type Systems for Distributed Data Sharing. SAS 2003: 273-294 - 2002
- [j9]David L. Oppenheimer, Aaron B. Brown, James Beck, Daniel Hettena, Jon Kuroda, Noah Treuhaft, David A. Patterson, Katherine A. Yelick:
ROC-1: Hardware Support for Recovery-Oriented Computing. IEEE Trans. Computers 51(2): 100-107 (2002) - [c32]Brian R. Gaeke, Parry Husbands, Xiaoye S. Li, Leonid Oliker, Katherine A. Yelick, Rupak Biswas:
Memory-Intensive Benchmarks: IRAM vs. Cache-Based Machines. IPDPS 2002 - [c31]Rich Vuduc, James Demmel, Katherine A. Yelick, Shoaib Kamil, Rajesh Nishtala, Benjamin C. Lee:
Performance optimizations and bounds for sparse matrix-vector multiply. SC 2002: 35:1-35:35 - 2001
- [j8]Christoforos E. Kozyrakis, David Judd, Joseph Gebis, Samuel Williams, David A. Patterson, Katherine A. Yelick:
Hardware/compiler codevelopment for an embedded media processor. Proc. IEEE 89(11): 1694-1709 (2001) - [c30]Eun-Jin Im, Katherine A. Yelick:
Optimizing Sparse Matrix Computations for Register Reuse in SPARSITY. International Conference on Computational Science (1) 2001: 127-136 - 2000
- [c29]Thinh P. Q. Nguyen, Avideh Zakhor, Katherine A. Yelick:
Performance Analysis of an H.263 Video Encoder for VIRAM. ICIP 2000: 98-101 - [c28]David Judd, Katherine A. Yelick, Christoforos E. Kozyrakis, David R. Martin, David A. Patterson:
Exploiting On-Chip Memory Bandwidth in the VIRAM Compiler. Intelligent Memory Systems 2000: 122-134
1990 – 1999
- 1999
- [c27]Remzi H. Arpaci-Dusseau, Eric Anderson, Noah Treuhaft, David E. Culler, Joseph M. Hellerstein, David A. Patterson, Katherine A. Yelick:
Cluster I/O with River: Making the Fast Case Common. IOPADS 1999: 10-22 - [c26]Eun-Jin Im, Katherine A. Yelick:
Optimizing Sparse Matrix Vector Multiplication on SMP. PP 1999 - [c25]Arvind Krishnamurthy, Alexander Aiken, Phillip Colella, David Gay, Susan L. Graham, Paul N. Hilfinger, Ben Liblit, Carleton Miyamoto, Geoff Pike, Luigi Semenzato, Katherine A. Yelick:
Titanium: A High Performance Java Dialect. PP 1999 - 1998
- [j7]Katherine A. Yelick, Luigi Semenzato, Geoff Pike, Carleton Miyamoto, Ben Liblit, Arvind Krishnamurthy, Paul N. Hilfinger, Susan L. Graham, David Gay, Phillip Colella, Alex Aiken:
Titanium: A High-performance Java Dialect. Concurr. Pract. Exp. 10(11-13): 825-836 (1998) - 1997
- [j6]Christoforos E. Kozyrakis, Stylianos Perissakis, David A. Patterson, Thomas E. Anderson, Krste Asanovic, Neal Cardwell, Richard Fromm, Jason Golbus, Benjamin Gribstad, Kimberly Keeton, Randi Thomas, Noah Treuhaft, Katherine A. Yelick:
Scalable Processors in the Billion-Transistor Era: IRAM. Computer 30(9): 75-78 (1997) - [j5]Soumen Chakrabarti, James Demmel, Katherine A. Yelick:
Models and Scheduling Algorithms for Mixed Data and Task Parallel Programs. J. Parallel Distributed Comput. 47(2): 168-184 (1997) - [j4]David A. Patterson, Thomas E. Anderson, Neal Cardwell, Richard Fromm, Kimberly Keeton, Christoforos E. Kozyrakis, Randi Thomas, Katherine A. Yelick:
A case for intelligent RAM. IEEE Micro 17(2): 34-44 (1997) - [c24]David A. Patterson, Krste Asanovic, Aaron B. Brown, Richard Fromm, Jason Golbus, Benjamin Gribstad, Kimberly Keeton, Christoforos E. Kozyrakis, David R. Martin, Stylianos Perissakis, Randi Thomas, Noah Treuhaft, Katherine A. Yelick:
Intelligent RAM (IRAM): The Industrial Setting, Applications and Architectures. ICCD 1997: 2-7 - [c23]Richard Fromm, Stylianos Perissakis, Neal Cardwell, Christoforos E. Kozyrakis, Bruce McGaughy, David A. Patterson, Thomas E. Anderson, Katherine A. Yelick:
The Energy Efficiency of IRAM Architectures. ISCA 1997: 327-337 - 1996
- [j3]Arvind Krishnamurthy, Katherine A. Yelick:
Analyses and Optimizations for Shared Address Space Programs. J. Parallel Distributed Comput. 38(2): 130-144 (1996) - [c22]Arvind Krishnamurthy, Klaus E. Schauser, Chris J. Scheiman, Randolph Y. Wang, David E. Culler, Katherine A. Yelick:
Evaluation of Architectural Support for Global Address-Based Communication in Large-Scale Parallel Machines. ASPLOS 1996: 37-48 - [c21]Steve G. Steinberg, Jun Yang, Katherine A. Yelick:
Performance Modeling and Composition: A Case Study in Cell Simulation. IPPS 1996: 68-74 - [c20]Katherine A. Yelick:
Systems Support for Irregular Parallel Applications (Abstract). IRREGULAR 1996: 145 - 1995
- [c19]Chih-Po Wen, Katherine A. Yelick:
Portable Runtime Support for Asynchronous Simulation. ICPP (2) 1995: 196-205 - [c18]Remzi H. Arpaci, David E. Culler, Arvind Krishnamurthy, Steve G. Steinberg, Katherine A. Yelick:
Empirical Evaluation of the CRAY-T3D: A Compiler Perspective. ISCA 1995: 320-331 - [c17]Chih-Po Wen, Soumen Chakrabarti, Etienne Deprit, Arvind Krishnamurthy, Katherine A. Yelick:
Runtime Support for Portable Distributed Data Structures. LCR 1995: 111-120 - [c16]Arvind Krishnamurthy, Katherine A. Yelick:
Optimizing Parallel Programs with Explicit Synchronization. PLDI 1995: 196-204 - [c15]Katherine A. Yelick, Chih-Po Wen, Soumen Chakrabarti, Etienne Deprit, Jeff A. Jones, Arvind Krishnamurthy:
Portable Parallel Irregular Applications. PSLS 1995: 157-173 - [c14]Jeff A. Jones, Katherine A. Yelick:
Parallelizing the Phylogeny Problem. SC 1995: 25 - [c13]Soumen Chakrabarti, James Demmel, Katherine A. Yelick:
Modeling the Benefits of Mixed Data and Task Parallelism. SPAA 1995: 74-83 - 1994
- [j2]Soumen Chakrabarti, Katherine A. Yelick:
Distributed Data Structures and Algorithms for Gröbner Basis Computation. LISP Symb. Comput. 7(2-3): 147-172 (1994) - [c12]Arvind Krishnamurthy, Steven S. Lumetta, David E. Culler, Katherine A. Yelick:
Connected components on distributed memory machines. Parallel Algorithms 1994: 1-21 - [c11]Arvind Krishnamurthy, Katherine A. Yelick:
Optimizing Parallel SPMD Programs. LCPC 1994: 331-345 - 1993
- [c10]Chih-Po Wen, Katherine A. Yelick:
Parallel timing simulation on a distributed memory multiprocessor. ICCAD 1993: 130-135 - [c9]Soumen Chakrabarti, Katherine A. Yelick:
Implementing an Irregular Application on a Distributed Memory Multiprocessor. PPoPP 1993: 169-178 - [c8]Soumen Chakrabarti, Katherine A. Yelick:
On the Correctness of a Distributed Memory Gröbner basis Algorithm. RTA 1993: 77-91 - [c7]David E. Culler, Andrea C. Dusseau, Seth Copen Goldstein, Arvind Krishnamurthy, Steven Lumetta, Thorsten von Eicken, Katherine A. Yelick:
Parallel programming in Split-C. SC 1993: 262-273 - [c6]Geoffrey C. Fox, Sanjay Ranka, Michael L. Scott, Allen D. Malony, James C. Browne, Marina C. Chen, Alok N. Choudhary, Thomas E. Cheatham, Janice E. Cuny, Rudolf Eigenmann, Amr F. Fahmy, Ian T. Foster, Dennis Gannon, Tomasz Haupt, Carl Kesselman, Charles Koelbel, Wei Li, Monica S. Lam, Thomas J. LeBlanc, Jim Openshaw, David A. Padua, Constantine D. Polychronopoulos, Joel H. Saltz, Alan Sussman, Gil Weigand, Katherine A. Yelick:
Common runtime support for high-performance parallel languages. SC 1993: 752-757 - 1992
- [c5]Katherine A. Yelick, Stephen J. Garland:
A Parallel Completion Procedure for Term Rewriting Systems. CADE 1992: 109-123 - [c4]Katherine A. Yelick:
Programming Models for Irregular Applications. SIGPLAN Workshop 1992: 28-31 - [p1]Joseph L. Zachary, Katherine A. Yelick:
Using Moded Type Systems to Support Abstraction in Logic Programs. Types in Logic Programming 1992: 229-243 - 1990
- [c3]Katherine A. Yelick:
Parallel Completion. Dagstuhl Seminar on Parallelization in Inference Systems 1990: 348
1980 – 1989
- 1989
- [c2]Katherine A. Yelick, Joseph L. Zachary:
Moded Type Systems for Logic Programming. POPL 1989: 116-124 - 1987
- [j1]Katherine A. Yelick:
Unification in Combinations of Collapse-Free Regular Theories. J. Symb. Comput. 3(1/2): 153-181 (1987) - 1985
- [c1]Katherine A. Yelick:
Combining Unification Algorithms for Confined Regular Equational Theories. RTA 1985: 365-380
Coauthor Index
[j33] [c133] [c132] [c131] [i24] [i23] [i22] [c127] [c126] [c125] [c124] [i21] [c123] [c122] [c121] [c120] [c119] [c118] [c116] [c114] [i19] [j31] [c111] [c110] [c108] [i18] [i17] [i16] [i15] [i13] [i12] [i11] [c107] [c106] [c105] [i10] [c104] [c101] [i9] [i8] [c100] [c99] [i7] [i5] [c97] [c95] [c93] [c86]
Leonid Oliker
aka: Lenny Oliker
aka: Lenny Oliker
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