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Jeremy Goecks
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2020 – today
- 2022
- [j11]Enis Afgan, Anton Nekrutenko, Björn A. Grüning, Daniel J. Blankenberg, Jeremy Goecks, Michael C. Schatz, Alexander E. Ostrovsky, Alexandru Mahmoud, Andrew J. Lonie, Anna Syme, Anne Fouilloux, Anthony Bretaudeau, Anup Kumar, Arthur C. Eschenlauer, Assunta D. Desanto, Aysam Guerler, Beatriz Serrano-Solano, Bérénice Batut, Bradley W. Langhorst, Bridget Carr, Bryan A. Raubenolt, Cameron J. Hyde, Catherine J. Bromhead, Christopher B. Barnett, Coline Royaux, Cristóbal Gallardo, Daniel J. Fornika, Dannon Baker, Dave Bouvier, Dave Clements, David A. de Lima Morais, David Lopez Tabernero, Delphine Larivière, Engy Nasr, Federico Zambelli, Florian Heyl, Fotis E. Psomopoulos, Frederik Coppens, Gareth R. Price, Gianmauro Cuccuru, Gildas Le Corguillé, Gregory Von Kuster, Gulsum Gudukbay, Helena Rasche, Hans-Rudolf Hotz, Ignacio Eguinoa, Igor V. Makunin, Isuru Ranawaka, James Taylor, Jayadev Joshi, Jennifer Hillman-Jackson, John Chilton, Kaivan Kamali, Keith Suderman, Krzysztof Poterlowicz, Yvan Le Bras, Lucille Lopez-Delisle, Luke Sargent, Madeline E. Bassetti, Marco Antonio Tangaro, Marius van den Beek, Martin Cech, Matthias Bernt, Matthias Fahrner, Mehmet Tekman, Melanie Christine Föll, Michael R. Crusoe, Miguel Roncoroni, Natalie Kucher, Nate Coraor, Nicholas Stoler, Nick Rhodes, Nicola Soranzo, Niko Pinter, Nuwan Goonasekera, Pablo A. Moreno, Pavankumar Videm, Petera Melanie, Pietro Mandreoli, Pratik D. Jagtap, Qiang Gu, Ralf J. M. Weber, Ross Lazarus, Ruben H. P. Vorderman, Saskia D. Hiltemann, Sergey Golitsynskiy, Shilpa Garg, Simon A. Bray, Simon L. Gladman, Simone Leo, Subina P. Mehta, Timothy J. Griffin, Vahid Jalili, Yves Vandenbrouck, Victor Wen, Vijay K. Nagampalli, Wendi A. Bacon, Willem L. De Koning, Wolfgang Maier, Peter J. Briggs:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. Nucleic Acids Res. 50(W1): 345-351 (2022) - 2021
- [j10]Qiang Gu, Anup Kumar, Simon Bray, Allison Creason, Alireza Khanteymoori, Vahid Jalili, Björn A. Grüning, Jeremy Goecks:
Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine. PLoS Comput. Biol. 17(6) (2021) - 2020
- [j9]Vahid Jalili, Enis Afgan, James Taylor, Jeremy Goecks:
Cloud bursting galaxy: federated identity and access management. Bioinform. 36(1): 1-9 (2020) - [j8]Vahid Jalili, Enis Afgan, Qiang Gu, Dave Clements, Daniel J. Blankenberg, Jeremy Goecks, James Taylor, Anton Nekrutenko:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update. Nucleic Acids Res. 48(Webserver-Issue): W395-W402 (2020) - [j7]Luke Sargent, Yating Liu, Wilson Leung, Nathan T. Mortimer, David Lopatto, Jeremy Goecks, Sarah C. R. Elgin:
G-OnRamp: Generating genome browsers to facilitate undergraduate-driven collaborative genome annotation. PLoS Comput. Biol. 16(6) (2020)
2010 – 2019
- 2019
- [j6]Yating Liu, Luke Sargent, Wilson Leung, Sarah C. R. Elgin, Jeremy Goecks:
G-OnRamp: a Galaxy-based platform for collaborative annotation of eukaryotic genomes. Bioinform. 35(21): 4422-4423 (2019) - [j5]Vahid Jalili, Matteo Matteucci, Jeremy Goecks, Yashar Deldjoo, Stefano Ceri:
Next Generation Indexing for Genomic Intervals. IEEE Trans. Knowl. Data Eng. 31(10): 2008-2021 (2019) - 2018
- [j4]Enis Afgan, Dannon Baker, Bérénice Batut, Marius van den Beek, Dave Bouvier, Martin Cech, John Chilton, Dave Clements, Nate Coraor, Björn A. Grüning, Aysam Guerler, Jennifer Hillman-Jackson, Saskia D. Hiltemann, Vahid Jalili, Helena Rasche, Nicola Soranzo, Jeremy Goecks, James Taylor, Anton Nekrutenko, Daniel J. Blankenberg:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update. Nucleic Acids Res. 46(Webserver-Issue): W537-W544 (2018) - [c9]Enis Afgan, Vahid Jalili, Nuwan Goonasekera, James Taylor, Jeremy Goecks:
Federated Galaxy: Biomedical Computing at the Frontier. IEEE CLOUD 2018: 871-874 - 2016
- [j3]Enis Afgan, Dannon Baker, Marius van den Beek, Daniel J. Blankenberg, Dave Bouvier, Martin Cech, John Chilton, Dave Clements, Nate Coraor, Carl Eberhard, Björn A. Grüning, Aysam Guerler, Jennifer Hillman-Jackson, Gregory Von Kuster, Eric Rasche, Nicola Soranzo, Nitesh Turaga, James Taylor, Anton Nekrutenko, Jeremy Goecks:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update. Nucleic Acids Res. 44(Webserver-Issue): W3-W10 (2016) - 2015
- [j2]Nomi L. Harris, Peter J. A. Cock, Brad A. Chapman, Jeremy Goecks, Hans-Rudolf Hotz, Hilmar Lapp:
The Bioinformatics Open Source Conference (BOSC) 2013. Bioinform. 31(2): 299-300 (2015) - [j1]Aidan Budd, Manuel Corpas, Michelle D. Brazas, Jonathan C. Fuller, Jeremy Goecks, Nicola J. Mulder, Magali Michaut, B. F. Francis Ouellette, Aleksandra Pawlik, Niklas Blomberg:
A Quick Guide for Building a Successful Bioinformatics Community. PLoS Comput. Biol. 11(2) (2015) - 2012
- [c8]Jeremy Goecks, The Galaxy Team, Anton Nekrutenko, James Taylor:
Lessons learned from Galaxy, a Web-based platform for high-throughput genomic analyses. eScience 2012: 1-6 - 2011
- [c7]Jeremy Goecks, Kanwei Li, Dave Clements, The Galaxy Team, James Taylor:
The Galaxy Track Browser: Transforming the genome browser from visualization tool to analysis tool. BioVis 2011: 39-46 - [p1]Enis Afgan, Jeremy Goecks, Dannon Baker, Nate Coraor, Anton Nekrutenko, James Taylor:
Galaxy: A Gateway to Tools in e-Science. Guide to e-Science 2011: 145-177
2000 – 2009
- 2009
- [c6]Jeremy Goecks, W. Keith Edwards, Elizabeth D. Mynatt:
Challenges in supporting end-user privacy and security management with social navigation. SOUPS 2009 - 2008
- [c5]Jeremy Goecks, Amy Voida, Stephen Voida, Elizabeth D. Mynatt:
Charitable technologies: opportunities for collaborative computing in nonprofit fundraising. CSCW 2008: 689-698 - 2004
- [c4]Jeremy Goecks, Elizabeth D. Mynatt:
Leveraging social networks for information sharing. CSCW 2004: 328-331 - 2002
- [c3]Jeremy Goecks, Dan Cosley:
NuggetMine: intelligent groupware for opportunistically sharing information nuggets. IUI 2002: 87-94 - [c2]Joe Tullio, Jeremy Goecks, Elizabeth D. Mynatt, David H. Nguyen:
Augmenting shared personal calendars. UIST 2002: 11-20 - 2000
- [c1]Jeremy Goecks, Jude W. Shavlik:
Learning users' interests by unobtrusively observing their normal behavior. IUI 2000: 129-132
Coauthor Index
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