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2020 – today
- 2023
[j4]Abbas Shojaee, Shao-Shan Carol Huang
:
Robust discovery of gene regulatory networks from single-cell gene expression data by Causal Inference Using Composition of Transactions. Briefings Bioinform. 24(6) (2023)
2010 – 2019
- 2013
- [j3]Nurcan Tuncbag, Alfredo Braunstein, Andrea Pagnani, Shao-Shan Carol Huang, Jennifer T. Chayes, Christian Borgs, Riccardo Zecchina, Ernest Fraenkel:
Simultaneous Reconstruction of Multiple Signaling Pathways via the Prize-Collecting Steiner Forest Problem. J. Comput. Biol. 20(2): 124-136 (2013) - [j2]Shao-Shan Carol Huang, David C. Clarke, Sara J. C. Gosline, Adam Labadorf, Candace R. Chouinard, William Gordon, Douglas A. Lauffenburger, Ernest Fraenkel:
Linking Proteomic and Transcriptional Data through the Interactome and Epigenome Reveals a Map of Oncogene-induced Signaling. PLoS Comput. Biol. 9(2) (2013) - 2012
- [j1]Nurcan Tuncbag, Scott McCallum, Shao-Shan Carol Huang, Ernest Fraenkel:
SteinerNet: a web server for integrating 'omic' data to discover hidden components of response pathways. Nucleic Acids Res. 40(Web-Server-Issue): 505-509 (2012) - [c1]Nurcan Tuncbag, Alfredo Braunstein, Andrea Pagnani, Shao-Shan Carol Huang, Jennifer T. Chayes, Christian Borgs, Riccardo Zecchina, Ernest Fraenkel:
Simultaneous Reconstruction of Multiple Signaling Pathways via the Prize-Collecting Steiner Forest Problem. RECOMB 2012: 287-301
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