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2010 – 2019
- 2019
[j11]Thomas A. Darde
, Estelle Lecluze, Aurélie Lardenois, Isabelle Stévant, Nathan Alary, Frank Tüttelmann, Olivier Collin, Serge Nef, Bernard Jégou, Antoine D. Rolland, Frédéric Chalmel:
The ReproGenomics Viewer: a multi-omics and cross-species resource compatible with single-cell studies for the reproductive science community. Bioinform. 35(17): 3133-3139 (2019)- 2018
- [j10]Thomas A. Darde, Pierre Gaudriault, Rémi Beranger, Clément Lancien, Annaëlle Caillarec-Joly, Olivier Sallou, Nathalie Bonvallot, Cécile Chevrier, Séverine Mazaud-Guittot, Bernard Jégou, Olivier Collin, Emmanuelle Becker, Antoine D. Rolland, Frédéric Chalmel:
TOXsIgN: a cross-species repository for toxicogenomic signatures. Bioinform. 34(12): 2116-2122 (2018) - 2017
- [j9]Sarah Cohen Boulakia, Khalid Belhajjame, Olivier Collin, Jérôme Chopard, Christine Froidevaux, Alban Gaignard, Konrad Hinsen, Pierre Larmande, Yvan Le Bras, Frédéric Lemoine, Fabien Mareuil, Hervé Ménager, Christophe Pradal, Christophe Blanchet:
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. Future Gener. Comput. Syst. 75: 284-298 (2017) - 2016
- [j8]Olivier Sallou, Paula Duek Roggli, Thomas A. Darde, Olivier Collin, Lydie Lane, Frédéric Chalmel:
PepPSy: a web server to prioritize gene products in experimental and biocuration workflows. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j7]Thomas A. Darde, Olivier Sallou, Emmanuelle Becker, Bertrand Evrard, Cyril Monjeaud, Yvan Le Bras, Bernard Jégou, Olivier Collin, Antoine D. Rolland, Frédéric Chalmel:
The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community. Nucleic Acids Res. 43(Webserver-Issue): W109-W116 (2015) - [j6]Damian Smedley, Syed Haider, Steffen Durinck, Luca Pandini, Paolo Provero, James E. Allen, Olivier Arnaiz, Mohammad Hamza Awedh, Richard A. Baldock, Giulia Barbiera, Philippe Bardou, Tim Beck, Andrew Blake, Merideth Bonierbale, Anthony J. Brookes, Gabriele Bucci, Iwan Buetti, Sarah W. Burge, Cédric Cabau, Joseph W. Carlson, Claude Chelala, Charalambos Chrysostomou, Davide Cittaro, Olivier Collin, Raul Cordova, Rosalind J. Cutts, Erik Dassi, Alex Di Génova, Anis Djari, Anthony Esposito, Heather Estrella, Eduardo Eyras, Julio Fernandez-Banet, Simon A. Forbes, Robert C. Free, Takatomo Fujisawa, Emanuela Gadaleta, Jose M. Garcia-Manteiga, David M. Goodstein, Kristian A. Gray, José Afonso Guerra-Assunção, Bernard Haggarty, Dongjin Han, Byungwoo Han, Todd W. Harris, Jayson Harshbarger, Robert K. Hastings, Richard D. Hayes, Claire Hoede, Shen Hu, Zhi-Liang Hu, Lucie N. Hutchins, Zhengyan Kan, Hideya Kawaji, Aminah-Olivia Keliet, Arnaud Kerhornou, Sunghoon Kim, Rhoda Kinsella, Christophe Klopp, Lei Kong, Daniel Lawson, Dejan Lazarevic, Ji-Hyun Lee, Thomas Letellier, Chuan-Yun Li, Pietro Liò, Chu-Jun Liu, Jie Luo, Alejandro Maass, Jérôme Mariette, Thomas Maurel, Stefania Merella, Azza Mostafa Mohamed, François Moreews, Nabihoudine Ibouniyamine, Nelson Ndegwa, Céline Noirot, Christian Perez-Llamas, Michael Primig, Alessandro Quattrone, Hadi Quesneville, Davide Rambaldi, James M. Reecy, Michela Riba, Steven Rosanoff, Amna Ali Saddiq, Elisa Salas, Olivier Sallou, Rebecca Shepherd, Reinhard Simon, Linda Sperling, William Spooner, Daniel M. Staines, Delphine Steinbach, Kevin R. Stone, Elia Stupka, Jon W. Teague, Abu Z. Dayem Ullah, Jun Wang, Doreen Ware, Marie Wong-Erasmus, Ken Youens-Clark, Amonida Zadissa, Shi-Jian Zhang, Arek Kasprzyk:
The BioMart community portal: an innovative alternative to large, centralized data repositories. Nucleic Acids Res. 43(Webserver-Issue): W589-W598 (2015) - [c9]Olivier Collin, Aleksandra Guerraz:
Classification d'entités nommées de type film. TALN 2015: 48-54 - [i1]François Moreews, Olivier Sallou, Hervé Ménager, Yvan Le Bras, Cyril Monjeaud, Christophe Blanchet, Olivier Collin:
BioShaDock: a community driven bioinformatics shared Docker-based tools registry. F1000Research 4: 1443 (2015) - 2013
- [j5]Anthony Bretaudeau, François Coste, Florian Humily, Laurence Garczarek, Gildas Le Corguillé, Christophe Six, Morgane Ratin, Olivier Collin, Wendy M. Schluchter, Frédéric Partensky:
CyanoLyase: a database of phycobilin lyase sequences, motifs and functions. Nucleic Acids Res. 41(Database-Issue): 396-401 (2013) - 2012
- [j4]Ramona Britto, Olivier Sallou, Olivier Collin, Grégoire Michaux, Michael Primig, Frédéric Chalmel:
GPSy: a cross-species gene prioritization system for conserved biological processes - application in male gamete development. Nucleic Acids Res. 40(Web-Server-Issue): 458-465 (2012) - 2011
- [c8]Emilie Guimier De Neef, Aurélien Bossard, Frédéric Gavignet, Olivier Collin:
Un outil de géolocalisation et de résumé automatique pour faciliter l'accès à l'information dans des corpus d'actualité. EGC 2011: 263-266 - 2010
- [j3]Aurélie Lardenois, Alexandre Gattiker, Olivier Collin, Frédéric Chalmel, Michael Primig:
GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle. Database J. Biol. Databases Curation 2010 (2010) - [c7]Benoît Gaillard, Malek Boualem, Olivier Collin:
Query translation using Wikipedia-based resources for analysis and disambiguation. EAMT 2010 - [c6]Olivier Collin, Benoît Gaillard, Jean Léon Bouraoui:
Constitution d'une ressource sémantique issue du treillis des catégories de Wikipedia. TALN (Articles courts) 2010: 20-25 - [c5]Benoît Gaillard, Olivier Collin, Malek Boualem:
Traduction de requêtes basée sur Wikipédia. TALN (Articles courts) 2010: 207-212
2000 – 2009
- 2009
- [j2]Alexandre Gattiker, Leandro Hermida, Robin Liechti, Ioannis Xenarios, Olivier Collin, Jacques Rougemont, Michael Primig:
MIMAS 3.0 is a Multiomics Information Management and Annotation System. BMC Bioinform. 10 (2009) - 2008
- [j1]Olivier Filangi, Yoann Beausse, Anthony Assi, Ludovic Legrand, Jean-Marc Larré, Véronique Martin, Olivier Collin, Christophe Caron, Hugues Leroy, David Allouche:
BioMAJ: a flexible framework for databanks synchronization and processing. Bioinform. 24(16): 1823-1825 (2008) - 2006
- [c4]Olivier Collin, Émmanuelle Pétrier:
Acquisition de concepts bilingues à partir du Web. TALN (Articles longs) 2006: 112-120 - 2003
- [c3]Florence Duclaye, Olivier Collin, François Yvon:
Apprentissage Automatique de Paraphrases pour l'Amélioration d'un Système de Questions-Réponses. TALN (Articles longs) 2003: 115-124 - 2002
- [c2]Florence Duclaye, François Yvon, Olivier Collin:
Using the Web as a Linguistic Resource for Learning Reformulations Automatically. LREC 2002
1990 – 1999
- 1999
- [c1]Chafic Mokbel, Olivier Collin:
Incremental enrolment of speech recognizers. ICASSP 1999: 453-456
Coauthor Index
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