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2010 – 2019
- 2019
[j19]Konrad Zych, Gerrit Gort, Chris A. Maliepaard, Ritsert C. Jansen, Roeland E. Voorrips
:
FitTetra 2.0 - improved genotype calling for tetraploids with multiple population and parental data support. BMC Bioinform. 20(1): 148:1-148:8 (2019)- 2016
- [j18]Danny Arends, Yang Li, Gudrun A. Brockmann, Ritsert C. Jansen, Robert W. Williams, Pjotr Prins:
Correlation Trait Loci (CTL) mapping: phenotype network inference subject to genotype. J. Open Source Softw. 1(6): 87 (2016) - 2015
- [j17]Konrad Zych, Yang Li, K. Joeri van der Velde, Ronny Joosen, Wilco Ligterink, Ritsert C. Jansen, Danny Arends:
Pheno2Geno - High-throughput generation of genetic markers and maps from molecular phenotypes for crosses between inbred strains. BMC Bioinform. 16: 51:1-51:8 (2015) - 2014
- [j16]K. Joeri van der Velde, Mark de Haan, Konrad Zych, Danny Arends, L. Basten Snoek, Jan E. Kammenga, Ritsert C. Jansen, Morris A. Swertz, Yang Li:
WormQTLHD - a web database for linking human disease to natural variation data in C. elegans. Nucleic Acids Res. 42(Database-Issue): 794-801 (2014) - 2013
- [j15]L. Basten Snoek, K. Joeri van der Velde, Danny Arends, Yang Li, Antje Beyer, Mark Elvin, Jasmin Fisher, Alex Hajnal, Michael O. Hengartner, Gino B. Poulin, Miriam Rodriguez, Tobias Schmid, Sabine Schrimpf, Feng Xue, Ritsert C. Jansen, Jan E. Kammenga, Morris A. Swertz:
WormQTL - public archive and analysis web portal for natural variation data in Caenorhabditis spp. Nucleic Acids Res. 41(Database-Issue): 738-743 (2013) - 2012
- [j14]Caroline Durrant, Morris A. Swertz, Rudi Alberts, Danny Arends, Steffen Möller, Richard Mott, Pjotr Prins, K. Joeri van der Velde, Ritsert C. Jansen, Klaus Schughart:
Bioinformatics tools and database resources for systems genetics analysis in mice - a short review and an evaluation of future needs. Briefings Bioinform. 13(2): 135-142 (2012) - [j13]Danny Arends, K. Joeri van der Velde, Pjotr Prins, Karl W. Broman, Steffen Möller, Ritsert C. Jansen, Morris A. Swertz:
xQTL workbench: a scalable web environment for multi-level QTL analysis. Bioinform. 28(7): 1042-1044 (2012) - 2011
- [j12]Harm-Jan Westra, Ritsert C. Jansen, Rudolf S. N. Fehrmann, Gerard J. te Meerman, David van Heel, Cisca Wijmenga, Lude Franke:
MixupMapper: correcting sample mix-ups in genome-wide datasets increases power to detect small genetic effects. Bioinform. 27(15): 2104-2111 (2011) - 2010
- [j11]Frank Johannes, René Wardenaar, Maria Colomé-Tatché, Florence Mousson, Petra de Graaf, Michal Mokry, Victor Guryev, H. Th. Marc Timmers, Edwin Cuppen, Ritsert C. Jansen:
Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq. Bioinform. 26(8): 1000-1006 (2010) - [j10]Danny Arends, Pjotr Prins, Ritsert C. Jansen, Karl W. Broman:
R/qtl: high-throughput multiple QTL mapping. Bioinform. 26(23): 2990-2992 (2010) - [j9]Bruno M. Tesson, Rainer Breitling, Ritsert C. Jansen:
DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules. BMC Bioinform. 11: 497 (2010) - [j8]Morris A. Swertz, Martijn Dijkstra, Tomasz Adamusiak, K. Joeri van der Velde, Alexandros Kanterakis, Erik T. Roos, Joris Lops, Gudmundur A. Thorisson, Danny Arends, George Byelas, Juha Muilu, Anthony J. Brookes, Engbert O. de Brock, Ritsert C. Jansen, Helen E. Parkinson:
The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button. BMC Bioinform. 11(S-12): S12 (2010)
2000 – 2009
- 2009
- [j7]Yang Li, Morris A. Swertz, Gonzalo Vera, Jingyuan Fu, Rainer Breitling, Ritsert C. Jansen:
designGG: an R-package and web tool for the optimal design of genetical genomics experiments. BMC Bioinform. 10 (2009) - 2008
- [j6]Rudi Alberts, Gonzalo Vera, Ritsert C. Jansen:
affyGG: computational protocols for genetical genomics with Affymetrix arrays. Bioinform. 24(3): 433-434 (2008) - [j5]Gonzalo Vera, Ritsert C. Jansen, Remo Suppi:
R/parallel - speeding up bioinformatics analysis with R. BMC Bioinform. 9 (2008) - [c1]Morris A. Swertz, Damian Smedley, Katy Wolstencroft, Rudi Alberts, Michael Zouberakis, Vassilis Aidinis, Klaus Schughart, Paul N. Schofield, Ritsert C. Jansen:
Towards dynamic database infrastructures for mouse genetics. BIBE 2008: 1-7 - 2007
- [j4]Rudi Alberts, Peter Terpstra, Menno Hardonk, Leonid V. Bystrykh, Gerald de Haan, Rainer Breitling, Jan Peter Nap, Ritsert C. Jansen:
A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat. BMC Bioinform. 8 (2007) - 2006
- [j3]Casper J. Albers, Ritsert C. Jansen, Jan Kok, Oscar P. Kuipers, Sacha A. F. T. van Hijum:
SIMAGE: simulation of DNA-microarray gene expression data. BMC Bioinform. 7: 205 (2006) - 2005
- [j2]Rudi Alberts, Jingyuan Fu, Morris A. Swertz, L. Alrik Lubbers, Casper J. Albers, Ritsert C. Jansen:
Combining microarrays and genetic analysis. Briefings Bioinform. 6(2): 135-145 (2005) - 2004
- [j1]Morris A. Swertz, Engbert O. de Brock, Sacha A. F. T. van Hijum, Anne de Jong, Girbe Buist, Richard J. S. Baerends, Jan Kok, Oscar P. Kuipers, Ritsert C. Jansen:
Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases. Bioinform. 20(13): 2075-2083 (2004)
Coauthor Index
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