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2020 – today
- 2020
[j6]Henry B. Zhang, Minji Kim
, Jeffrey H. Chuang, Yijun Ruan:
pyBedGraph: a python package for fast operations on 1D genomic signal tracks. Bioinform. 36(10): 3234-3235 (2020)- [j5]Michal Wlasnowolski, Michal Sadowski, Tymon Czarnota, Karolina Jodkowska, Przemyslaw Szalaj, Zhonghui Tang, Yijun Ruan, Dariusz Plewczynski:
3D-GNOME 2.0: a three-dimensional genome modeling engine for predicting structural variation-driven alterations of chromatin spatial structure in the human genome. Nucleic Acids Res. 48(Webserver-Issue): W170-W176 (2020)
2010 – 2019
- 2016
- [j4]Katie Wilkins, Mehedi Hassan, Margherita Francescatto, Jakob B. Jespersen, R. Gonzalo Parra, Bart Cuypers, Dan F. DeBlasio, Alexander Junge, Anupama Jigisha, Farzana Rahman, Griet Laenen, Sander Willems, Lieven Thorrez, Yves Moreau, Nagarajan Raju, Sonia P. Chothani, C. Ramakrishnan, Masakazu Sekijima, M. Michael Gromiha, Paddy J. Slator, Nigel J. Burroughs, Przemyslaw Szalaj, Zhonghui Tang, Paul J. Michalski, Oskar Luo, Xingwang Li, Yijun Ruan, Dariusz Plewczynski, Giulia Fiscon, Emanuel Weitschek, Massimo Ciccozzi, Paola Bertolazzi, Giovanni Felici, Pieter Meysman, Manu Vanaerschot, Maya Berg, Hideo Imamura, Jean-Claude Dujardin, Kris Laukens, Westa Domanova, James R. Krycer, Rima Chaudhuri, Pengyi Yang, Fatemeh Vafaee, Daniel J. Fazakerley, Sean J. Humphrey, David E. James, Zdenka Kuncic:
Highlights from the 11th ISCB Student Council Symposium 2015: Dublin, Ireland. 10 July 2015. BMC Bioinform. 17(S-3) (2016) - [j3]Przemyslaw Szalaj, Paul J. Michalski, Przemyslaw Wróblewski, Zhonghui Tang, Michal Kadlof, Giovanni Mazzocco, Yijun Ruan, Dariusz Plewczynski:
3D-GNOME: an integrated web service for structural modeling of the 3D genome. Nucleic Acids Res. 44(Webserver-Issue): W288-W293 (2016) - [j2]Asa Thibodeau, Eladio J. Márquez, Oscar Luo, Yijun Ruan, Francesca Menghi, Dong-Guk Shin, Michael L. Stitzel, Paola Vera-Licona, Duygu Ucar:
QuIN: A Web Server for Querying and Visualizing Chromatin Interaction Networks. PLoS Comput. Biol. 12(6) (2016)
2000 – 2009
- 2008
- [c1]Vinsensius B. Vega, Yijun Ruan, Wing-Kin Sung:
A Streamlined and Generalized Analysis of Chromatin ImmunoPrecipitation Paired-End diTag Data. ICCS (3) 2008: 130-139 - 2006
- [j1]Kuo Ping Chiu, Chee-Hong Wong, Qiongyu Chen, Pramila Ariyaratne, Hong Sain Ooi, Chia-Lin Wei, Wing-Kin Sung, Yijun Ruan:
PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data. BMC Bioinform. 7: 390 (2006)
Coauthor Index
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