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2020 – today
- 2023
[j9]Christiam Camacho
, Grzegorz M. Boratyn, Victor Joukov, Roberto Vera Alvarez, Thomas L. Madden:
ElasticBLAST: accelerating sequence search via cloud computing. BMC Bioinform. 24(1): 117 (2023)- 2021
- [j8]Michael Y. Galperin, Yuri I. Wolf, Kira S. Makarova, Roberto Vera Alvarez, David Landsman, Eugene V. Koonin:
COG database update: focus on microbial diversity, model organisms, and widespread pathogens. Nucleic Acids Res. 49(Database-Issue): D274-D281 (2021)
2010 – 2019
- 2019
- [j7]Roberto Vera Alvarez, Lorinc Sándor Pongor, Leonardo Mariño-Ramírez, David Landsman:
TPMCalculator: one-step software to quantify mRNA abundance of genomic features. Bioinform. 35(11): 1960-1962 (2019) - [j6]Alexis Allot, Qingyu Chen, Sun Kim, Roberto Vera Alvarez, Donald C. Comeau, W. John Wilbur, Zhiyong Lu:
LitSense: making sense of biomedical literature at sentence level. Nucleic Acids Res. 47(Webserver-Issue): W594-W599 (2019) - 2018
- [j5]Roberto Vera Alvarez, Shan Li, David Landsman, Ivan Ovcharenko:
SNPDelScore: combining multiple methods to score deleterious effects of noncoding mutations in the human genome. Bioinform. 34(2): 289-291 (2018) - 2017
- [j4]Roberto Vera Alvarez, Newton Medeiros Vidal, Gina A. Garzón-Martínez, Luz S. Barrero, David Landsman, Leonardo Mariño-Ramírez:
Workflow and web application for annotating NCBI BioProject transcriptome data. Database J. Biol. Databases Curation 2017: bax008 (2017) - [j3]Felipe da Veiga Leprevost, Björn A. Grüning, Saulo Aflitos, Hannes L. Röst, Julian Uszkoreit, Harald Barsnes, Marc Vaudel, Pablo A. Moreno, Laurent Gatto, Jonas Weber, Mingze Bai, Rafael C. Jiménez, Timo Sachsenberg, Julianus Pfeuffer, Roberto Vera Alvarez, Johannes Griss, Alexey I. Nesvizhskii, Yasset Pérez-Riverol:
BioContainers: an open-source and community-driven framework for software standardization. Bioinform. 33(16): 2580-2582 (2017) - 2014
- [b1]Roberto Vera:
Large scale annotation of biological data using integrated database managament tools. Pázmány Péter Catholic University, Hungary, 2014 - [j2]Attila Kertész-Farkas, Beáta Reiz, Roberto Vera, Michael P. Myers, Sándor Pongor:
PTMTreeSearch: a novel two-stage tree-search algorithm with pruning rules for the identification of post-translational modification of proteins in MS/MS spectra. Bioinform. 30(2): 234-241 (2014) - 2013
- [j1]Roberto Vera, Yasset Pérez-Riverol, Sonia Pérez, Balázs Ligeti, Attila Kertész-Farkas, Sándor Pongor:
JBioWH: an open-source Java framework for bioinformatics data integration. Database J. Biol. Databases Curation 2013 (2013) - [c1]Balázs Ligeti, Roberto Vera, Gergely Lukács, Balazs Györffy, Sándor Pongor:
Predicting effective drug combinations via network propagation. BioCAS 2013: 378-381 - [i1]Yasset Pérez-Riverol, Roberto Vera Alvarez:
A UML-based Approach to Design Parallel and Distributed Applications. CoRR abs/1311.7011 (2013)
Coauthor Index
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