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Virginie Uhlmann
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- affiliation: European Molecular Biology Laboratory (EMBL), Cambridge, UK
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2020 – today
- 2024
- [i4]Johannes Hugger, Virginie Uhlmann:
Noise contrastive estimation with soft targets for conditional models. CoRR abs/2404.14076 (2024) - 2023
- [j16]Maria Theiss, Jean-Karim Hériché, Craig Russell, David Helekal, Alisdair Soppitt, Jonas Ries, Jan Ellenberg, Alvis Brazma, Virginie Uhlmann:
Simulating structurally variable nuclear pore complexes for microscopy. Bioinform. 39(10) (2023) - 2022
- [j15]Virginie Uhlmann, Zsuzsanna Püspöki, Adrien Depeursinge, Michael Unser, Daniel Sage, Julien Fageot:
Steer'n'Detect: fast 2D template detection with accurate orientation estimation. Bioinform. 38(11): 3146-3148 (2022) - [j14]James Klatzow, Giovanni Dalmasso, Neus Martínez-Abadías, James Sharpe, Virginie Uhlmann:
μMatch: 3D Shape Correspondence for Biological Image Data. Frontiers Comput. Sci. 4: 777615 (2022) - [j13]Florian Levet, Virginie Uhlmann, Florian Jug:
Editorial: Methods and Tools for Bioimage Analysis. Frontiers Comput. Sci. 4: 931939 (2022) - [j12]Virginie Uhlmann, Laurène Donati, Daniel Sage:
A Practical Guide to Supervised Deep Learning for Bioimage Analysis: Challenges and good practices. IEEE Signal Process. Mag. 39(2): 73-86 (2022) - 2021
- [j11]Julien Fageot, Virginie Uhlmann, Zsuzsanna Püspöki, Benjamin Beck, Michael Unser, Adrien Depeursinge:
Principled Design and Implementation of Steerable Detectors. IEEE Trans. Image Process. 30: 4465-4478 (2021) - [c10]Ethan Cohen, Virginie Uhlmann:
Aura-Net: Robust Segmentation Of Phase-Contrast Microscopy Images with Few Annotations. ISBI 2021: 640-644 - [c9]Soham Mandal, Virginie Uhlmann:
Splinedist: Automated Cell Segmentation With Spline Curves. ISBI 2021: 1082-1086 - [i3]Ethan Cohen, Virginie Uhlmann:
aura-net : robust segmentation of phase-contrast microscopy images with few annotations. CoRR abs/2102.01389 (2021) - 2020
- [j10]Julien Fageot, Shayan Aziznejad, Michael Unser, Virginie Uhlmann:
Support and approximation properties of Hermite splines. J. Comput. Appl. Math. 368 (2020) - [j9]Anna Song, Virginie Uhlmann, Julien Fageot, Michael Unser:
Dictionary Learning for Two-Dimensional Kendall Shapes. SIAM J. Imaging Sci. 13(1): 141-175 (2020)
2010 – 2019
- 2019
- [c8]Soham Mandal, Virginie Uhlmann:
A Learning-Based Formulation of Parametric Curve Fitting for Bioimage Analysis. ENUMATH 2019: 1031-1038 - 2018
- [j8]Virginie Uhlmann, Carsten Haubold, Fred A. Hamprecht, Michael Unser:
DiversePathsJ: diverse shortest paths for bioimage analysis. Bioinform. 34(3): 538-540 (2018) - [i2]Carsten Haubold, Virginie Uhlmann, Michael Unser, Fred A. Hamprecht:
Diverse M-Best Solutions by Dynamic Programming. CoRR abs/1803.05748 (2018) - 2017
- [j7]Anais Badoual, Daniel Schmitter, Virginie Uhlmann, Michael Unser:
Multiresolution Subdivision Snakes. IEEE Trans. Image Process. 26(3): 1188-1201 (2017) - [c7]Carsten Haubold, Virginie Uhlmann, Michael Unser, Fred A. Hamprecht:
Diverse M-Best Solutions by Dynamic Programming. GCPR 2017: 255-267 - [c6]Harshit Gupta, Daniel Schmitter, Virginie Uhlmann, Michael Unser:
General surface energy for spinal cord and aorta segmentation. ISBI 2017: 319-322 - [i1]Julien Fageot, Virginie Uhlmann, Michael Unser:
Gaussian and Sparse Processes Are Limits of Generalized Poisson Processes. CoRR abs/1702.05003 (2017) - 2016
- [j6]Virginie Uhlmann, Shantanu Singh, Anne E. Carpenter:
CP-CHARM: segmentation-free image classification made accessible. BMC Bioinform. 17: 51 (2016) - [j5]Zsuzsanna Püspöki, Virginie Uhlmann, Cédric Vonesch, Michael Unser:
Design of Steerable Wavelets to Detect Multifold Junctions. IEEE Trans. Image Process. 25(2): 643-657 (2016) - [j4]Pedram Pad, Virginie Uhlmann, Michael Unser:
Maximally Localized Radial Profiles for Tight Steerable Wavelet Frames. IEEE Trans. Image Process. 25(5): 2275-2287 (2016) - [j3]Virginie Uhlmann, Julien Fageot, Michael Unser:
Hermite Snakes With Control of Tangents. IEEE Trans. Image Process. 25(6): 2803-2816 (2016) - [c5]Virginie Uhlmann, Ricard Delgado-Gonzalo, Michael Unser, Patrik Olavi Michel, Lucia Baldi, Florian Maria Wurm:
USER-friendly image-based segmentation and analysis of chromosomes. ISBI 2016: 395-398 - 2015
- [j2]Ricard Delgado-Gonzalo, Virginie Uhlmann, Daniel Schmitter, Michael Unser:
Snakes on a Plane: A perfect snap for bioimage analysis. IEEE Signal Process. Mag. 32(1): 41-48 (2015) - [j1]Ricard Delgado-Gonzalo, Daniel Schmitter, Virginie Uhlmann, Michael Unser:
Efficient Shape Priors for Spline-Based Snakes. IEEE Trans. Image Process. 24(11): 3915-3926 (2015) - [c4]Virginie Uhlmann, Michael Unser:
Tip-seeking active contours for bioimage segmentation. ISBI 2015: 544-547 - 2014
- [c3]Virginie Uhlmann, Ricard Delgado-Gonzalo, Costanza Conti, Lucia Romani, Michael Unser:
Exponential Hermite splines for the analysis of biomedical images. ICASSP 2014: 1631-1634 - [c2]Pedram Pad, Virginie Uhlmann, Michael Unser:
VOW: Variance-optimal wavelets for the steerable pyramid. ICIP 2014: 2973-2977 - [c1]Virginie Uhlmann, Ricard Delgado-Gonzalo, Michael Unser:
Snakes with tangent-based control and energies for bioimage analysis. ISBI 2014: 806-809
Coauthor Index
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