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ORCIDAlexey V. Zakharov
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2020 – today
- 2021
[j14]Sankalp Jain
, Vishal B. Siramshetty, Vinicius M. Alves, Eugene N. Muratov, Nicole C. Kleinstreuer, Alexander Tropsha, Marc C. Nicklaus, Anton Simeonov, Alexey V. Zakharov:
Large-Scale Modeling of Multispecies Acute Toxicity End Points Using Consensus of Multitask Deep Learning Methods. J. Chem. Inf. Model. 61(2): 653-663 (2021)- [j13]Wengong Jin, Jonathan M. Stokes, Richard T. Eastman, Zina Itkin, Alexey V. Zakharov, James J. Collins, Tommi S. Jaakkola, Regina Barzilay:
Deep learning identifies synergistic drug combinations for treating COVID-19. Proc. Natl. Acad. Sci. USA 118(39): e2105070118 (2021) - 2020
- [j12]Pranav Shah, Vishal B. Siramshetty, Alexey V. Zakharov, Noel Southall, Xin Xu, Dac-Trung Nguyen:
Predicting liver cytosol stability of small molecules. J. Cheminformatics 12(1): 21 (2020) - [j11]Vinicius M. Alves, Stephen J. Capuzzi, Rodolpho C. Braga, Daniel Robert Korn, Joshua E. Hochuli, Kyle H. Bowler, Adam Yasgar, Ganesha Rai, Anton Simeonov, Eugene N. Muratov, Alexey V. Zakharov, Alexander Tropsha:
SCAM Detective: Accurate Predictor of Small, Colloidally Aggregating Molecules. J. Chem. Inf. Model. 60(8): 4056-4063 (2020) - [j10]Vishal B. Siramshetty, Dac-Trung Nguyen, Natalia J. Martinez, Noel Southall, Anton Simeonov, Alexey V. Zakharov:
Critical Assessment of Artificial Intelligence Methods for Prediction of hERG Channel Inhibition in the "Big Data" Era. J. Chem. Inf. Model. 60(12): 6007-6019 (2020)
2010 – 2019
- 2019
- [j9]Alexey Lagunin, Athina Geronikaki, Phaedra Eleftheriou, Pavel V. Pogodin, Alexey V. Zakharov:
Rational Use of Heterogeneous Data in Quantitative Structure-Activity Relationship (QSAR) Modeling of Cyclooxygenase/Lipoxygenase Inhibitors. J. Chem. Inf. Model. 59(2): 713-730 (2019) - [j8]Alexey V. Zakharov, Tongan Zhao, Dac-Trung Nguyen, Tyler Peryea, Timothy Sheils, Adam Yasgar, Ruili Huang, Noel Southall, Anton Simeonov:
Novel Consensus Architecture To Improve Performance of Large-Scale Multitask Deep Learning QSAR Models. J. Chem. Inf. Model. 59(11): 4613-4624 (2019) - 2015
- [j7]Olga A. Tarasova, Aleksandra F. Urusova, Dmitry Filimonov, Marc C. Nicklaus, Alexey V. Zakharov, Vladimir Poroikov:
QSAR Modeling Using Large-Scale Databases: Case Study for HIV-1 Reverse Transcriptase Inhibitors. J. Chem. Inf. Model. 55(7): 1388-1399 (2015) - 2014
- [j6]Alexey V. Zakharov, Megan L. Peach, Markus Sitzmann, Marc C. Nicklaus:
QSAR Modeling of Imbalanced High-Throughput Screening Data in PubChem. J. Chem. Inf. Model. 54(3): 705-712 (2014) - [j5]Alexey V. Zakharov, Megan L. Peach, Markus Sitzmann, Marc C. Nicklaus:
A New Approach to Radial Basis Function Approximation and Its Application to QSAR. J. Chem. Inf. Model. 54(3): 713-719 (2014) - 2013
- [c2]Mikhail J. Moiseev, Mikhail Glukhikh, Alexey V. Zakharov, Harald Richter:
A static analysis approach to data race detection in SystemC designs. DDECS 2013: 54-59 - 2012
- [j4]Alexey V. Zakharov, Mikhail J. Moiseev:
Automatic data race detection in SystemC models. Autom. Control. Comput. Sci. 46(7): 356-363 (2012) - 2011
- [c1]Mikhail J. Moiseev, Alexey V. Zakharov, Ilya Klotchkov, Sergey I. Salishev:
Static analysis method for deadlock detection in SystemC designs. SoC 2011: 42-47 - 2010
- [j3]Boris Sobolev, Dmitry Filimonov, Alexey Lagunin, Alexey V. Zakharov, Olga Koborova, Alexander E. Kel, Vladimir Poroikov:
Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates. BMC Bioinform. 11: 313 (2010) - [j2]Barry J. Hardy, Nicki Douglas, Christoph Helma, Micha Rautenberg, Nina Jeliazkova, Vedrin Jeliazkov, Ivelina Nikolova, Romualdo Benigni, Olga Tcheremenskaia, Stefan Kramer, Tobias Girschick, Fabian Buchwald, Jörg Wicker, Andreas Karwath, Martin Gütlein, Andreas Maunz, Haralambos Sarimveis, Georgia Melagraki, Antreas Afantitis, Pantelis Sopasakis, David Gallagher, Vladimir Poroikov, Dmitry Filimonov, Alexey V. Zakharov, Alexey Lagunin, Tatyana Gloriozova, Sergey Novikov, Natalia Skvortsova, Dmitry S. Druzhilovskiy, Sunil Chawla, Indira Ghosh, Surajit Ray, Hitesh Patel, Sylvia Escher:
Collaborative development of predictive toxicology applications. J. Cheminformatics 2: 7 (2010)
2000 – 2009
- 2007
- [j1]Fedor A. Kolpakov, Vladimir Poroikov, Ruslan N. Sharipov, Yury V. Kondrakhin, Alexey V. Zakharov, Alexey Lagunin, Luciano Milanesi, Alexander E. Kel:
CYCLONET - an integrated database on cell cycle regulation and carcinogenesis. Nucleic Acids Res. 35(Database-Issue): 550-556 (2007)
Coauthor Index
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