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2020 – today
- 2023
[j27]Aleksandar M. Dimitrijevic
, Aleksandar Milosavljevic, Dejan D. Rancic:
Efficient Distortion Mitigation and Partition Reduction in Mapping Global Geodata: Dual Orthogonal Equidistant Cylindrical Projection Approach. ISPRS Int. J. Geo Inf. 12(7): 289 (2023)- [j26]Kilannin Krysiak, Arpad M. Danos, Jason Saliba, Joshua F. McMichael, Adam C. Coffman, Susanna Kiwala, Erica K. Barnell, Lana Sheta, Cameron J. Grisdale, Lynzey Kujan, Shahil Pema, Jake Lever, Sarah Ridd, Nicholas C. Spies, Veronica Andric, Andreea Chiorean, Damian Tobias Rieke, Kaitlin A. Clark, Caralyn Reisle, Ajay C. Venigalla, Mark Evans, Payal Jani, Hideaki Takahashi, Avila Suda, Peter Horák, Deborah i Ritter, Xin Zhou, Benjamin J. Ainscough, Sean Delong, Chimene Kesserwan, Mario Lamping, Haolin Shen, Alex Marr, My Hoang, Kartik Singhal, Mariam Khanfar, Brian V. Li, Wan-Hsin Lin, Panieh Terraf, Laura B. Corson, Yasser Salama, Katie M. Campbell, Kirsten M. Farncombe, Jianling Ji, Xiaonan Zhao, Xinjie Xu, Rashmi Kanagal-Shamanna, Ian King, Kelsy C. Cotto, Zachary L. Skidmore, Jason R. Walker, Jinghui Zhang, Aleksandar Milosavljevic, Ronak Y. Patel, Rachel H. Giles, Raymond H. Kim, Lynn M. Schriml, Elaine R. Mardis, Steven J. M. Jones, Gordana Raca, Shruti Rao, Subha Madhavan, Alex H. Wagner, Malachi Griffith, Obi L. Griffith:
CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase. Nucleic Acids Res. 51(D1): 1230-1241 (2023) - [j25]Oscar D. Murillo, Varduhi Petrosyan, Emily L. LaPlante, Lacey E. Dobrolecki, Michael T. Lewis, Aleksandar Milosavljevic:
Deconvolution of cancer cell states by the XDec-SM method. PLoS Comput. Biol. 19(8) (2023) - [c12]Aleksandar Milosavljevic, Robin Piedeleu, Fabio Zanasi:
String Diagram Rewriting Modulo Commutative (Co)Monoid Structure. CALCO 2023: 9:1-9:17 - [c11]Aleksandar Milosavljevic, Bratislav Predic, Djuradj Milosevic:
Imagelytics: A Deep Learning-Based Image Classification Tool to Support Bioassessment. DCAI (3) 2023: 42-50 - 2022
- [j24]Chih-Hsuan Wei, Alexis Allot, Kevin Riehle, Aleksandar Milosavljevic, Zhiyong Lu:
tmVar 3.0: an improved variant concept recognition and normalization tool. Bioinform. 38(18): 4449-4451 (2022) - [j23]Predrag Obradovic, Vladimir B. Kovacevic, Xiqi Li, Aleksandar Milosavljevic:
An Information-Theoretic Bound on p-Values for Detecting Communities Shared between Weighted Labeled Graphs. Entropy 24(10): 1329 (2022) - [i2]Chih-Hsuan Wei, Alexis Allot, Kevin Riehle, Aleksandar Milosavljevic, Zhiyong Lu:
tmVar 3.0: an improved variant concept recognition and normalization tool. CoRR abs/2204.03637 (2022) - [i1]Aleksandar Milosavljevic, Fabio Zanasi:
String Diagram Rewriting Modulo Commutative Monoid Structure. CoRR abs/2204.04274 (2022) - 2021
- [j22]Lillian R. Thistlethwaite, Varduhi Petrosyan, Xiqi Li, Marcus J. Miller, Sarah H. Elsea, Aleksandar Milosavljevic:
CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models. PLoS Comput. Biol. 17(1) (2021) - [j21]Lillian R. Thistlethwaite, Varduhi Petrosyan, Xiqi Li, Marcus J. Miller, Sarah H. Elsea, Aleksandar Milosavljevic:
Correction: CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models. PLoS Comput. Biol. 17(10) (2021) - 2020
- [j20]Clémentine Decamps, Florian Privé, Raphael Bacher, Daniel Jost, Arthur Waguet, Eugene Andres Houseman, Eugene Lurie, Pavlo Lutsik, Aleksandar Milosavljevic, Michael Scherer, Michael G. B. Blum, Magali Richard:
Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software. BMC Bioinform. 21(1): 16 (2020) - [j19]Aleksandar Milosavljevic:
Identification of Salt Deposits on Seismic Images Using Deep Learning Method for Semantic Segmentation. ISPRS Int. J. Geo Inf. 9(1): 24 (2020) - [j18]Aleksandar Milosavljevic:
Automated Processing of Remote Sensing Imagery Using Deep Semantic Segmentation: A Building Footprint Extraction Case. ISPRS Int. J. Geo Inf. 9(8): 486 (2020)
2010 – 2019
- 2017
- [j17]Aleksandar Milosavljevic, Dejan D. Rancic, Aleksandar M. Dimitrijevic, Bratislav Predic, Vladan Mihajlovic:
A Method for Estimating Surveillance Video Georeferences. ISPRS Int. J. Geo Inf. 6(7): 211 (2017) - [c10]Smiljana Djorovic, Nenad Filipovic, Aleksandar Milosavljevic, Lazar U. Velicki:
Comparative Finite Element Analysis of Patient-Specific Tricuspid and Bicuspid Aortic Valve. BIBE 2017: 563-567 - 2016
- [j16]Casey L. Overby, Guilherme Del Fiol, Wendy S. Rubinstein, Donna R. Maglott, Tristan Nelson, Aleksandar Milosavljevic, Christa Martin, Scott Goehringer, Robert R. Freimuth, Marc S. Williams, Bret S. E. Heale:
Integrating Genomic Resources with Electronic Health Records using the HL7 Infobutton Standard. Appl. Clin. Inform. 07(03): 817-831 (2016) - [j15]Aleksandar Milosavljevic, Dejan D. Rancic, Aleksandar M. Dimitrijevic, Bratislav Predic, Vladan Mihajlovic:
Integration of GIS and video surveillance. Int. J. Geogr. Inf. Sci. 30(10): 2089-2107 (2016) - 2015
- [j14]Roadmap Epigenomics Consortium, Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi Moussavi, Pouya Kheradpour, ZhiZhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald T. Quon, Richard S. Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaick Carles, Jesse R. Dixon, Kyle Kai-How Farh, Soheil Feizi, Rosa Karlic, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane J. Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard C. Sallari, Kyle T. Siebenthall, Nicholas A. Sinnott-Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy J. Farnham, Susan J. Fisher, David Haussler, Steven J. M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil R. Sunyaev, James A. Thomson, Thea D. Tlsty, Li-Huei Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, Bradley E. Bernstein, Joseph F. Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljevic, Bing Ren, John A. Stamatoyannopoulos, Ting Wang, Manolis Kellis:
Integrative analysis of 111 reference human epigenomes Open. Nat. 518(7539): 317-330 (2015) - 2014
- [j13]Cristian Coarfa, Christina Pichot, Andrew R. Jackson, Arpit Tandon, Viren Amin, Sriram Raghuraman, Sameer Paithankar, Adrian V. Lee, Sean E. McGuire, Aleksandar Milosavljevic:
Analysis of interactions between the epigenome and structural mutability of the genome using Genboree workbench tools. BMC Bioinform. 15(S-7): S2 (2014) - 2013
- [j12]Chia-Chin Wu, Kalpana Kannan, Steven Lin, Laising Yen, Aleksandar Milosavljevic:
Identification of cancer fusion drivers using network fusion centrality. Bioinform. 29(9): 1174-1181 (2013) - 2012
- [j11]Danny Challis, Jin Yu, Uday S. Evani, Andrew R. Jackson, Sameer Paithankar, Cristian Coarfa, Aleksandar Milosavljevic, Richard A. Gibbs, Fuli Yu:
An integrative variant analysis suite for whole exome next-generation sequencing data. BMC Bioinform. 13: 8 (2012) - [j10]Kevin Riehle, Cristian Coarfa, Andrew R. Jackson, Jun Ma, Arpit Tandon, Sameer Paithankar, Sriram Raghuraman, Toni-Ann Mistretta, Delphine Saulnier, Sabeen Raza, Maria Diaz, Robert Shulman, Kjersti Aagaard, James Versalovic, Aleksandar Milosavljevic:
The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences. BMC Bioinform. 13(S-13): S11 (2012) - 2011
- [c9]Uday S. Evani, Danny Challis, Jin Yu, Andrew R. Jackson, Sameer Paithankar, Matthew N. Bainbridge, Cristian Coarfa, Aleksandar Milosavljevic, Fuli Yu:
Enabling Atlas2 personal genome analysis on the cloud. GENSiPS 2011: 117-120 - 2010
- [j9]Bratislav Predic, Dejan D. Rancic, Aleksandar Milosavljevic:
Impacts of Applying Automated Vehicle Location Systems to Public Bus Transport Management. J. Res. Pract. Inf. Technol. 42(2): 79-98 (2010) - [j8]Cristian Coarfa, Fuli Yu, Christopher A. Miller, Zuozhou Chen, R. Alan Harris, Aleksandar Milosavljevic:
Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massively parallel DNA sequencing. BMC Bioinform. 11: 572 (2010) - [j7]Aleksandar Milosavljevic, Aleksandar M. Dimitrijevic, Dejan D. Rancic:
GIS-augmented video surveillance. Int. J. Geogr. Inf. Sci. 24(9): 1415-1433 (2010)
2000 – 2009
- 2008
- [c8]Cristian Coarfa, Aleksandar Milosavljevic:
Pash 2.0: Scaleable Sequence Anchoring for Next-Generation Sequencing Technologgies. Pacific Symposium on Biocomputing 2008: 102-113 - 2007
- [c7]Bratislav Predic, Dragan Stojanovic, Slobodanka Djordjevic-Kajan, Aleksandar Milosavljevic, Dejan D. Rancic:
Prediction of Bus Motion and Continuous Query Processing for Traveler Information Services. ADBIS 2007: 234-249 - [c6]Leonid Stoimenov, Aleksandar Milosavljevic, Aleksandar S. Stanimirovic:
GIS as a Tool in Emergency Management Process. World Congress on Engineering 2007: 238-242 - 2004
- [j6]Miklós Csürös, Aleksandar Milosavljevic:
Pooled Genomic Indexing (PGI): Analysis and Design of Experiments. J. Comput. Biol. 11(5): 1001-1021 (2004) - 2002
- [c5]Miklós Csürös, Aleksandar Milosavljevic:
Pooled Genomic Indexing (PGI): Mathematical Analysis and Experiment Design. WABI 2002: 10-28 - 2000
- [j5]Aleksandar Milosavljevic:
The Economic Value of Bioinformation. Bioinform. 16(7): 571-572 (2000)
1990 – 1999
- 1999
- [p1]Aleksandar Milosavljevic:
Discovering Patterns in DNA Sequences by the Algorithmic Significance Method. Pattern Discovery in Biomolecular Data 1999: 3-23 - 1996
- [c4]Aleksandar Milosavljevic, Suzana Savkovic, Radomir Crkvenjakov, David Salbego, Hope Serrato, Heidi Kreuzer, Anne Gemmell, Shawna Batus, Danica Grujic, Susan Carnahan, Jovanka Tepavcevic:
Genome-Scale DNA Sequence Recognition by Hybridization to Short Oligomers. ISMB 1996: 176-181 - 1995
- [j4]Aleksandar Milosavljevic:
DNA Sequence Recognition by Hybridization to Short Oligomers. J. Comput. Biol. 2(2): 355-370 (1995) - [j3]Aleksandar Milosavljevic:
Discovering Dependencies via Algorithmic Mutual Information: A Case Study in DNA Sequence Comparisons. Mach. Learn. 21(1-2): 35-50 (1995) - 1994
- [c3]Aleksandar Milosavljevic:
Sequence Comparisons via Algorithmic Mutual Information. ISMB 1994: 303-309 - 1993
- [j2]Aleksandar Milosavljevic, Jerzy Jurka:
Discovering simple DNA sequences by the algorithmic significance method. Comput. Appl. Biosci. 9(4): 407-411 (1993) - [j1]Aleksandar Milosavljevic, Jerzy Jurka:
Discovery by Minimal Length Encoding: A Case Study in Molecular Evolution. Mach. Learn. 12: 69-87 (1993) - [c2]Aleksandar Milosavljevic:
Discovering Sequence Similarity by the Algorithmic Significance Method. ISMB 1993: 284-291
1980 – 1989
- 1989
- [c1]Aleksandar Milosavljevic, David Haussler, Jerzy Jurka:
Informed Parsimonious Inference of Prototypical Genetic Sequences. COLT 1989: 102-117
Coauthor Index
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