{"id":"https://openalex.org/W3088188126","doi":"https://doi.org/10.32614/rj-2022-052","title":"casebase: An Alternative Framework for Survival Analysis and Comparison of Event Rates","display_name":"casebase: An Alternative Framework for Survival Analysis and Comparison of Event Rates","publication_year":2022,"publication_date":"2022-12-20","ids":{"openalex":"https://openalex.org/W3088188126","doi":"https://doi.org/10.32614/rj-2022-052","mag":"3088188126"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.32614/rj-2022-052","pdf_url":"https://journal.r-project.org/articles/RJ-2022-052/RJ-2022-052.pdf","source":{"id":"https://openalex.org/S2489169438","display_name":"The R Journal","issn_l":"2073-4859","issn":["2073-4859"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journal.r-project.org/articles/RJ-2022-052/RJ-2022-052.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059659798","display_name":"Sahir Bhatnagar","orcid":"https://orcid.org/0000-0001-8956-2509"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sahir Rai Bhatnagar*","raw_affiliation_strings":["McGill University"],"affiliations":[{"raw_affiliation_string":"McGill University","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076555314","display_name":"Maxime Turgeon","orcid":"https://orcid.org/0000-0003-4863-6035"},"institutions":[{"id":"https://openalex.org/I46247651","display_name":"University of Manitoba","ror":"https://ror.org/02gfys938","country_code":"CA","type":"education","lineage":["https://openalex.org/I46247651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Maxime Turgeon*","raw_affiliation_strings":["University of Manitoba"],"affiliations":[{"raw_affiliation_string":"University of Manitoba","institution_ids":["https://openalex.org/I46247651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062742746","display_name":"Jesse Islam","orcid":"https://orcid.org/0000-0001-7500-5453"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Jesse Islam","raw_affiliation_strings":["McGill University"],"affiliations":[{"raw_affiliation_string":"McGill University","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103220158","display_name":"James A. Hanley","orcid":"https://orcid.org/0000-0003-3486-5291"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"James A. Hanley","raw_affiliation_strings":["McGill University"],"affiliations":[{"raw_affiliation_string":"McGill University","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017074857","display_name":"Olli Saarela","orcid":"https://orcid.org/0000-0002-7177-8472"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Olli Saarela","raw_affiliation_strings":["University of Toronto"],"affiliations":[{"raw_affiliation_string":"University of Toronto","institution_ids":["https://openalex.org/I185261750"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.741,"has_fulltext":true,"fulltext_origin":"pdf","cited_by_count":4,"citation_normalized_percentile":{"value":0.58178,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":80,"max":82},"biblio":{"volume":"14","issue":"3","first_page":"59","last_page":"79"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.9985,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.9985,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.9923,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10845","display_name":"Advanced Causal Inference Techniques","score":0.9915,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[],"concepts":[{"id":"https://openalex.org/C50382708","wikidata":"https://www.wikidata.org/wiki/Q223218","display_name":"Proportional hazards model","level":2,"score":0.60682636},{"id":"https://openalex.org/C49261128","wikidata":"https://www.wikidata.org/wiki/Q1132455","display_name":"Hazard","level":2,"score":0.59698254},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.56662285},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.55960053},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.5401759},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49957418},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.45023546},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.44629958},{"id":"https://openalex.org/C10515644","wikidata":"https://www.wikidata.org/wiki/Q543310","display_name":"Survival analysis","level":2,"score":0.43299642},{"id":"https://openalex.org/C207103383","wikidata":"https://www.wikidata.org/wiki/Q3930246","display_name":"Hazard ratio","level":3,"score":0.430412},{"id":"https://openalex.org/C151956035","wikidata":"https://www.wikidata.org/wiki/Q1132755","display_name":"Logistic regression","level":2,"score":0.42989936},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39458272},{"id":"https://openalex.org/C44249647","wikidata":"https://www.wikidata.org/wiki/Q208498","display_name":"Confidence interval","level":2,"score":0.31888688},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.30130082},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.32614/rj-2022-052","pdf_url":"https://journal.r-project.org/articles/RJ-2022-052/RJ-2022-052.pdf","source":{"id":"https://openalex.org/S2489169438","display_name":"The R Journal","issn_l":"2073-4859","issn":["2073-4859"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://arxiv.org/abs/2009.10264","pdf_url":"https://arxiv.org/pdf/2009.10264","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":["Cornell University"],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.32614/rj-2022-052","pdf_url":"https://journal.r-project.org/articles/RJ-2022-052/RJ-2022-052.pdf","source":{"id":"https://openalex.org/S2489169438","display_name":"The R Journal","issn_l":"2073-4859","issn":["2073-4859"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":49,"referenced_works":["https://openalex.org/W150563991","https://openalex.org/W1580788756","https://openalex.org/W1587026990","https://openalex.org/W1736775139","https://openalex.org/W1810028515","https://openalex.org/W1955247199","https://openalex.org/W1988105793","https://openalex.org/W1992464801","https://openalex.org/W2021733365","https://openalex.org/W2023973295","https://openalex.org/W2038981426","https://openalex.org/W2042844758","https://openalex.org/W2088893370","https://openalex.org/W2095761465","https://openalex.org/W2097360283","https://openalex.org/W2097910870","https://openalex.org/W2105488735","https://openalex.org/W2106687317","https://openalex.org/W2110992644","https://openalex.org/W2121538535","https://openalex.org/W2122159287","https://openalex.org/W2122825543","https://openalex.org/W2146392455","https://openalex.org/W2157076315","https://openalex.org/W2182669574","https://openalex.org/W2377410957","https://openalex.org/W2473841907","https://openalex.org/W2582743722","https://openalex.org/W2735640454","https://openalex.org/W2796700885","https://openalex.org/W2944834825","https://openalex.org/W3024803032","https://openalex.org/W4230491783","https://openalex.org/W4236098165","https://openalex.org/W4237456942","https://openalex.org/W4238293282","https://openalex.org/W4239794595","https://openalex.org/W4244776886","https://openalex.org/W4247113968","https://openalex.org/W4250640807","https://openalex.org/W4293471670","https://openalex.org/W4294541781","https://openalex.org/W4310299640","https://openalex.org/W4384764646","https://openalex.org/W4399550009","https://openalex.org/W4399568948","https://openalex.org/W4399570272","https://openalex.org/W4399640756","https://openalex.org/W645058498"],"related_works":["https://openalex.org/W4380448775","https://openalex.org/W4380269519","https://openalex.org/W4281722959","https://openalex.org/W4225134093","https://openalex.org/W3136232645","https://openalex.org/W2994686985","https://openalex.org/W2581226876","https://openalex.org/W2010631330","https://openalex.org/W1554732404","https://openalex.org/W153028072"],"abstract_inverted_index":{"In":[0,108],"clinical":[1],"studies":[2],"of":[3,8,17,52,69,99,142,159],"time-to-event":[4],"data,":[5],"a":[6,41,66,117],"quantity":[7],"interest":[9],"to":[10,97,162,182],"the":[11,33,37,43,70,100,113,129,164],"clinician":[12],"is":[13],"their":[14],"patient's":[15],"risk":[16,61,103],"an":[18,156],"event.":[19],"However,":[20],"methods":[21],"relying":[22],"on":[23,47],"time":[24,143],"matching":[25],"or":[26,54,62,102],"risk-set":[27],"sampling":[28],"(including":[29],"Cox":[30],"regression)":[31],"eliminate":[32],"baseline":[34,71],"hazard":[35,49,83],"from":[36],"estimating":[38],"function.":[39],"As":[40],"consequence,":[42],"focus":[44],"has":[45],"been":[46],"reporting":[48,59],"ratios":[50],"instead":[51],"survival":[53,101,124],"cumulative":[55,63],"incidence":[56,64],"curves.":[57],"Indeed,":[58],"patient":[60],"requires":[65],"separate":[67],"estimation":[68],"hazard.":[72],"Using":[73],"case-base":[74,130],"sampling,":[75],"Hanley":[76],"&":[77],"Miettinen":[78],"(2009)":[79],"explained":[80],"how":[81,128],"parametric":[82,123],"functions":[84,141],"can":[85,132],"be":[86,134],"estimated":[87],"in":[88,136],"continuous-time":[89],"using":[90],"logistic":[91],"regression.":[92],"Their":[93],"approach":[94],"naturally":[95],"leads":[96],"estimates":[98],"function":[104],"that":[105],"are":[106],"smooth-in-time.":[107],"this":[109,183],"paper,":[110],"we":[111],"present":[112],"casebase":[114],"R":[115],"package,":[116],"comprehensive":[118],"and":[119,144,149,178],"flexible":[120],"toolkit":[121],"for":[122],"analysis.":[125,165],"We":[126,166],"describe":[127],"framework":[131],"also":[133,154],"used":[135],"more":[137],"complex":[138],"settings:":[139],"non-linear":[140],"non-proportional":[145],"hazards,":[146],"competing":[147],"risks,":[148],"variable":[150],"selection.":[151],"Our":[152],"package":[153],"includes":[155],"extensive":[157],"array":[158],"visualization":[160],"tools":[161],"complement":[163],"illustrate":[167],"all":[168],"these":[169],"features":[170],"through":[171],"three":[172],"different":[173],"case":[174],"studies.":[175],"*":[176],"SRB":[177],"MT":[179],"contributed":[180],"equally":[181],"work.":[184]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W3088188126","counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-01-15T18:06:56.882386","created_date":"2020-10-01"}