{"id":"https://openalex.org/W4313545518","doi":"https://doi.org/10.1371/journal.pcbi.1010749","title":"Ten simple rules for using public biological data for your research","display_name":"Ten simple rules for using public biological data for your research","publication_year":2023,"publication_date":"2023-01-05","ids":{"openalex":"https://openalex.org/W4313545518","doi":"https://doi.org/10.1371/journal.pcbi.1010749","pmid":"https://pubmed.ncbi.nlm.nih.gov/36602970"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010749","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010749&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010749&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071582387","display_name":"Vishal H. Oza","orcid":"https://orcid.org/0000-0001-6990-0267"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Vishal H. Oza","raw_affiliation_strings":["Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010413944","display_name":"Jordan H. Whitlock","orcid":"https://orcid.org/0000-0002-9336-545X"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jordan H. Whitlock","raw_affiliation_strings":["Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110955177","display_name":"Elizabeth J. Wilk","orcid":null},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Elizabeth J. Wilk","raw_affiliation_strings":["Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054619696","display_name":"Angelina Uno-Antonison","orcid":"https://orcid.org/0000-0002-4631-9135"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Angelina Uno-Antonison","raw_affiliation_strings":["Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001809357","display_name":"Brandon Wilk","orcid":"https://orcid.org/0000-0002-4110-2324"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brandon Wilk","raw_affiliation_strings":["Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086465438","display_name":"Manavalan Gajapathy","orcid":"https://orcid.org/0000-0002-8606-0113"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Manavalan Gajapathy","raw_affiliation_strings":["Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004840481","display_name":"Timothy C. Howton","orcid":"https://orcid.org/0000-0002-9423-0135"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Timothy C. Howton","raw_affiliation_strings":["Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038428073","display_name":"Austyn Trull","orcid":"https://orcid.org/0000-0002-9262-4202"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Austyn Trull","raw_affiliation_strings":["Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034506936","display_name":"Lara Ianov","orcid":"https://orcid.org/0000-0002-1859-2118"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]},{"id":"https://openalex.org/I2802884590","display_name":"Civitan International","ror":"https://ror.org/03a300k41","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2802884590"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lara Ianov","raw_affiliation_strings":["Civitan International Research Center, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Civitan International Research Center, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192","https://openalex.org/I2802884590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006311402","display_name":"Elizabeth A. Worthey","orcid":"https://orcid.org/0000-0003-4083-7764"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Elizabeth A. Worthey","raw_affiliation_strings":["Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Department of Pathology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"Center for Computational Genomics and Data Sciences, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068868068","display_name":"Brittany N. Lasseigne","orcid":"https://orcid.org/0000-0002-1642-8904"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"funder","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brittany N. Lasseigne","raw_affiliation_strings":["Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America"],"affiliations":[{"raw_affiliation_string":"Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America","institution_ids":["https://openalex.org/I32389192"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5071582387","https://openalex.org/A5010413944","https://openalex.org/A5110955177","https://openalex.org/A5054619696","https://openalex.org/A5001809357","https://openalex.org/A5086465438","https://openalex.org/A5004840481","https://openalex.org/A5038428073","https://openalex.org/A5034506936","https://openalex.org/A5006311402","https://openalex.org/A5068868068"],"corresponding_institution_ids":["https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I32389192","https://openalex.org/I2802884590","https://openalex.org/I32389192","https://openalex.org/I32389192"],"apc_list":{"value":2655,"currency":"USD","value_usd":2655},"apc_paid":{"value":2655,"currency":"USD","value_usd":2655},"fwci":2.204,"has_fulltext":true,"fulltext_origin":"pdf","cited_by_count":5,"citation_normalized_percentile":{"value":0.899121,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":90},"biblio":{"volume":"19","issue":"1","first_page":"e1010749","last_page":"e1010749"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9973,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9973,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9929,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/download","display_name":"Download","score":0.782853},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.76514053},{"id":"https://openalex.org/keywords/data-validation","display_name":"Data validation","score":0.41026932}],"concepts":[{"id":"https://openalex.org/C2780154274","wikidata":"https://www.wikidata.org/wiki/Q7126717","display_name":"Download","level":2,"score":0.782853},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.76514053},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.7602278},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7204495},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.6224055},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.48089194},{"id":"https://openalex.org/C2780535194","wikidata":"https://www.wikidata.org/wiki/Q309901","display_name":"Open data","level":2,"score":0.47188675},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.43466893},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4271139},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4110855},{"id":"https://openalex.org/C92446256","wikidata":"https://www.wikidata.org/wiki/Q3306762","display_name":"Data validation","level":2,"score":0.41026932},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.32828966},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3217848},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2621423},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.118620485},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C548081761","wikidata":"https://www.wikidata.org/wiki/Q180388","display_name":"Waste management","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":"","qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010749","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010749&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9815577","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://doi.org/10.20944/preprints202206.0320.v2","pdf_url":"https://www.preprints.org/manuscript/202206.0320/v2/download","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false},{"is_oa":true,"landing_page_url":"https://doi.org/10.20944/preprints202206.0320.v3","pdf_url":"https://www.preprints.org/manuscript/202206.0320/v3/download","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false},{"is_oa":true,"landing_page_url":"https://doi.org/10.20944/preprints202206.0320.v4","pdf_url":"https://www.preprints.org/manuscript/202206.0320/v4/download","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false},{"is_oa":true,"landing_page_url":"https://doi.org/10.20944/preprints202206.0320.v1","pdf_url":"https://www.preprints.org/manuscript/202206.0320/v1/download","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false},{"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36602970","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pcbi.1010749","pdf_url":"https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010749&type=printable","source":{"id":"https://openalex.org/S86033158","display_name":"PLoS Computational Biology","issn_l":"1553-734X","issn":["1553-734X","1553-7358"],"is_oa":true,"is_in_doaj":true,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[],"grants":[{"funder":"https://openalex.org/F4320306168","funder_display_name":"Cystic Fibrosis Foundation","award_id":"WORTHE19A0"},{"funder":"https://openalex.org/F4320333101","funder_display_name":"School of Medicine, University of Alabama at Birmingham","award_id":"RRID:SCR_021766"},{"funder":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute","award_id":"R00HG009678"},{"funder":"https://openalex.org/F4320337349","funder_display_name":"NIH Office of the Director","award_id":"R03OD030604"},{"funder":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences","award_id":"T32GM008111"},{"funder":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","award_id":"UG1HD107688"}],"datasets":[],"versions":[],"referenced_works_count":48,"referenced_works":["https://openalex.org/W2046766973","https://openalex.org/W2095340621","https://openalex.org/W2102729801","https://openalex.org/W2104846587","https://openalex.org/W2116041602","https://openalex.org/W2118258530","https://openalex.org/W2179000687","https://openalex.org/W2259938310","https://openalex.org/W2292912485","https://openalex.org/W2302501749","https://openalex.org/W2599308885","https://openalex.org/W2605897695","https://openalex.org/W2612519453","https://openalex.org/W2625117623","https://openalex.org/W2792663180","https://openalex.org/W2883630435","https://openalex.org/W2922534626","https://openalex.org/W2947060454","https://openalex.org/W2948417867","https://openalex.org/W2976808621","https://openalex.org/W2985330168","https://openalex.org/W2986579771","https://openalex.org/W2988126442","https://openalex.org/W3006653136","https://openalex.org/W3013971422","https://openalex.org/W3031329866","https://openalex.org/W3033773215","https://openalex.org/W3037882675","https://openalex.org/W3044447231","https://openalex.org/W3090499726","https://openalex.org/W3091866222","https://openalex.org/W3122109253","https://openalex.org/W3131996803","https://openalex.org/W3133607277","https://openalex.org/W3165462637","https://openalex.org/W3197433610","https://openalex.org/W3214383379","https://openalex.org/W3216633781","https://openalex.org/W4210644165","https://openalex.org/W4211043198","https://openalex.org/W4213108508","https://openalex.org/W4213239998","https://openalex.org/W4213424654","https://openalex.org/W4214501288","https://openalex.org/W4220964817","https://openalex.org/W4281683366","https://openalex.org/W4281860694","https://openalex.org/W4286208895"],"related_works":["https://openalex.org/W913131694","https://openalex.org/W650116260","https://openalex.org/W4390790060","https://openalex.org/W3037018281","https://openalex.org/W2944823289","https://openalex.org/W2914128081","https://openalex.org/W2378329187","https://openalex.org/W2134191509","https://openalex.org/W2123131699","https://openalex.org/W2093262417"],"abstract_inverted_index":{"With":[0],"an":[1],"increasing":[2],"amount":[3],"of":[4,60,125],"biological":[5,32],"data":[6,33,38,45,52,63,68,92,127,131],"available":[7,126],"publicly,":[8],"there":[9],"is":[10],"a":[11,14,117],"need":[12],"for":[13,29,46,62,67,119],"guide":[15,118],"on":[16],"how":[17],"to":[18,122,129],"successfully":[19],"download":[20,80],"and":[21,55,70,82,93,98,101,103,107,110,128,133],"use":[22,36,48,124],"this":[23],"data.":[24],"The":[25],"10":[26],"simple":[27],"rules":[28,113],"using":[30],"public":[31,37],"are:":[34],"(1)":[35],"purposefully":[39],"in":[40],"your":[41,47],"research;":[42],"(2)":[43],"evaluate":[44],"case;":[49],"(3)":[50],"check":[51],"reuse":[53,132],"requirements":[54],"embargoes;":[56],"(4)":[57],"be":[58],"aware":[59],"ethics":[61],"reuse;":[64],"(5)":[65],"plan":[66],"storage":[69],"compute":[71],"requirements;":[72],"(6)":[73],"know":[74],"what":[75],"you":[76],"are":[77,114],"downloading;":[78],"(7)":[79],"programmatically":[81],"verify":[83],"integrity;":[84],"(8)":[85],"properly":[86],"cite":[87],"data;":[88],"(9)":[89],"make":[90,105,123],"reprocessed":[91],"models":[94],"Findable,":[95],"Accessible,":[96],"Interoperable,":[97],"Reusable":[99],"(FAIR)":[100],"share;":[102],"(10)":[104],"pipelines":[106],"code":[108],"FAIR":[109],"share.":[111],"These":[112],"intended":[115],"as":[116],"researchers":[120],"wanting":[121],"increase":[130],"reproducibility.":[134]},"abstract_inverted_index_v3":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W4313545518","counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2025-04-24T03:14:26.986347","created_date":"2023-01-06"}