{"id":"https://openalex.org/W2177237686","doi":"https://doi.org/10.1186/s13029-015-0045-3","title":"FlexDM: Simple, parallel and fault-tolerant data mining using WEKA","display_name":"FlexDM: Simple, parallel and fault-tolerant data mining using WEKA","publication_year":2015,"publication_date":"2015-11-17","ids":{"openalex":"https://openalex.org/W2177237686","doi":"https://doi.org/10.1186/s13029-015-0045-3","mag":"2177237686","pmid":"https://pubmed.ncbi.nlm.nih.gov/26579209","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/4647584"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13029-015-0045-3","pdf_url":"https://scfbm.biomedcentral.com/track/pdf/10.1186/s13029-015-0045-3","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310320256"],"host_organization_lineage_names":["Springer Nature","BioMed Central"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://scfbm.biomedcentral.com/track/pdf/10.1186/s13029-015-0045-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017912813","display_name":"Madison Flannery","orcid":null},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Madison Flannery","raw_affiliation_strings":["Systems Biology Laboratory, University of Melbourne, Parkville, Australia"],"affiliations":[{"raw_affiliation_string":"Systems Biology Laboratory, University of Melbourne, Parkville, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003238807","display_name":"David Budden","orcid":"https://orcid.org/0000-0003-4372-8985"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"David M. Budden","raw_affiliation_strings":["Systems Biology Laboratory, University of Melbourne, Parkville, Australia"],"affiliations":[{"raw_affiliation_string":"Systems Biology Laboratory, University of Melbourne, Parkville, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011447378","display_name":"Alexandre Mendes","orcid":"https://orcid.org/0000-0003-1759-3765"},"institutions":[{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Alexandre Mendes","raw_affiliation_strings":["School of Electrical Engineering and Computer Science, The University of Newcastle, Callaghan, Australia"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, The University of Newcastle, Callaghan, Australia","institution_ids":["https://openalex.org/I78757542"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5011447378"],"corresponding_institution_ids":["https://openalex.org/I78757542"],"apc_list":null,"apc_paid":null,"fwci":1.278,"has_fulltext":true,"fulltext_origin":"pdf","cited_by_count":6,"citation_normalized_percentile":{"value":0.863844,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":82,"max":83},"biblio":{"volume":"10","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9977,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9977,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9955,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9846,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/extensibility","display_name":"Extensibility","score":0.51791877},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.5039682}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8577018},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.5698709},{"id":"https://openalex.org/C32833848","wikidata":"https://www.wikidata.org/wiki/Q4115054","display_name":"Extensibility","level":2,"score":0.51791877},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.5039682},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4967206},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4930372},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35329682},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.21862996},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19281733}],"mesh":[],"locations_count":3,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13029-015-0045-3","pdf_url":"https://scfbm.biomedcentral.com/track/pdf/10.1186/s13029-015-0045-3","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310320256"],"host_organization_lineage_names":["Springer Nature","BioMed Central"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4647584","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26579209","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13029-015-0045-3","pdf_url":"https://scfbm.biomedcentral.com/track/pdf/10.1186/s13029-015-0045-3","source":{"id":"https://openalex.org/S45786803","display_name":"Source Code for Biology and Medicine","issn_l":"1751-0473","issn":["1751-0473"],"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310320256"],"host_organization_lineage_names":["Springer Nature","BioMed Central"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/8","display_name":"Decent work and economic growth","score":0.46}],"grants":[],"datasets":[],"versions":[],"referenced_works_count":9,"referenced_works":["https://openalex.org/W1560051613","https://openalex.org/W1566376227","https://openalex.org/W2000515602","https://openalex.org/W2062076898","https://openalex.org/W2113604695","https://openalex.org/W2133990480","https://openalex.org/W2146437022","https://openalex.org/W2163592640","https://openalex.org/W3104276456"],"related_works":["https://openalex.org/W4253241429","https://openalex.org/W25068511","https://openalex.org/W2382693809","https://openalex.org/W2370256962","https://openalex.org/W2368425793","https://openalex.org/W2364420803","https://openalex.org/W2362760518","https://openalex.org/W2362738498","https://openalex.org/W1997653423","https://openalex.org/W1492726150"],"abstract_inverted_index":{"With":[0],"the":[1,61,80,125,192,198,209,246],"continued":[2],"exponential":[3],"growth":[4],"in":[5,70,136,176,260],"data":[6,9,204,254,273],"volume,":[7],"large-scale":[8,253],"mining":[10,255],"and":[11,40,50,87,114,127,167,188,201,223,227,239,279],"machine":[12,257],"learning":[13,258],"experiments":[14,94],"have":[15],"become":[16],"a":[17,34,54,85,96,111,133,139,156,173,186,231,277],"necessity":[18],"for":[19,30,138,236],"many":[20],"researchers":[21],"without":[22],"programming":[23],"or":[24,107,256],"statistics":[25],"backgrounds.":[26],"WEKA":[27,62,81,129,193],"(Waikato":[28],"Environment":[29],"Knowledge":[31],"Analysis)":[32],"is":[33,185,228],"gold":[35],"standard":[36],"framework":[37],"that":[38,67,141,205],"facilitates":[39],"simplifies":[41],"this":[42],"task":[43],"by":[44,164],"allowing":[45],"specification":[46,140],"of":[47,99,145,150,170,203,248,271],"algorithms,":[48],"hyper-parameters":[49],"test":[51],"strategies":[52],"from":[53,105],"streamlined":[55],"Experimenter":[56,63],"GUI.":[57],"Despite":[58],"its":[59],"popularity,":[60],"exhibits":[64],"several":[65],"limitations":[66,78],"we":[68],"address":[69],"our":[71],"new":[72],"FlexDM":[73,126,151,216],"software.FlexDM":[74],"addresses":[75],"four":[76],"fundamental":[77],"with":[79,265],"Experimenter:":[82],"reliance":[83],"on":[84,155,220],"verbose":[86],"difficult-to-modify":[88],"XML":[89,130,281],"schema;":[90],"inability":[91,102],"to":[92,103,116,191,262],"meta-optimise":[93],"over":[95,268],"large":[97,112,157],"number":[98],"algorithm":[100],"hyper-parameters;":[101],"recover":[104],"software":[106,242],"hardware":[108],"failure":[109],"during":[110,208],"experiment;":[113],"failing":[115],"leverage":[117],"modern":[118],"multicore":[119],"processor":[120,183],"architectures.":[121],"Direct":[122],"comparisons":[123],"between":[124],"default":[128],"schemas":[131],"demonstrate":[132],"10-fold":[134],"improvement":[135],"brevity":[137],"allows":[142],"finer":[143],"control":[144,267],"experimental":[146],"procedures.":[147],"The":[148],"stability":[149],"has":[152,206,217],"been":[153,218],"tested":[154,219],"biological":[158],"dataset":[159],"(approximately":[160],"450":[161],"k":[162],"attributes":[163],"150":[165],"samples),":[166],"automatic":[168],"parallelisation":[169],"tasks":[171],"yields":[172],"quasi-linear":[174],"reduction":[175],"execution":[177],"time":[178],"when":[179],"distributed":[180],"across":[181],"multiple":[182],"cores.FlexDM":[184],"powerful":[187],"easy-to-use":[189],"extension":[190],"package,":[194],"which":[195],"better":[196],"handles":[197],"increased":[199],"volume":[200],"complexity":[202],"emerged":[207],"20":[210],"years":[211],"since":[212],"WEKA's":[213],"original":[214],"development.":[215],"Windows,":[221],"OSX":[222],"Linux":[224],"operating":[225],"systems":[226],"provided":[229],"as":[230],"pre-configured":[232],"virtual":[233],"reference":[234],"environment":[235],"trivial":[237],"usage":[238],"extensibility.":[240],"This":[241],"can":[243],"substantially":[244],"improve":[245],"productivity":[247],"any":[249],"research":[250],"group":[251],"conducting":[252],"tasks,":[259],"addition":[261],"providing":[263],"non-programmers":[264],"improved":[266],"specific":[269],"aspects":[270],"their":[272],"analysis":[274],"pipeline":[275],"via":[276],"succinct":[278],"simplified":[280],"schema.":[282]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2177237686","counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-01-17T08:09:04.331711","created_date":"2016-06-24"}