{"id":"https://openalex.org/W2170432219","doi":"https://doi.org/10.1186/1752-0509-4-117","title":"Curating the innate immunity interactome","display_name":"Curating the innate immunity interactome","publication_year":2010,"publication_date":"2010-08-20","ids":{"openalex":"https://openalex.org/W2170432219","doi":"https://doi.org/10.1186/1752-0509-4-117","mag":"2170432219","pmid":"https://pubmed.ncbi.nlm.nih.gov/20727158","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/2936296"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-4-117","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-4-117","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-4-117","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085744778","display_name":"David J. Lynn","orcid":"https://orcid.org/0000-0003-4664-1404"},"institutions":[{"id":"https://openalex.org/I141766778","display_name":"Teagasc - The Irish Agriculture and Food Development Authority","ror":"https://ror.org/03sx84n71","country_code":"IE","type":"funder","lineage":["https://openalex.org/I141766778"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"David J Lynn","raw_affiliation_strings":["Animal & Bioscience Research Department, AGRIC, Teagasc, Grange, Dunsany, Co., Meath, Ireland"],"affiliations":[{"raw_affiliation_string":"Animal & Bioscience Research Department, AGRIC, Teagasc, Grange, Dunsany, Co., Meath, Ireland","institution_ids":["https://openalex.org/I141766778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088416416","display_name":"Calvin C. Chan","orcid":"https://orcid.org/0000-0002-9933-3061"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Calvin Chan","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108537590","display_name":"Misbah Naseer","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Misbah Naseer","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074834612","display_name":"Melissa Yau","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Melissa Yau","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028229255","display_name":"Raymond Lo","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"funder","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Raymond Lo","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017600873","display_name":"Anastasia Sribnaia","orcid":"https://orcid.org/0000-0003-1282-7139"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Anastasia Sribnaia","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077748634","display_name":"Giselle Ring","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Giselle Ring","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016795010","display_name":"Jaimmie Que","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Jaimmie Que","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052526625","display_name":"Kathleen Wee","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Kathleen Wee","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062211058","display_name":"Geoffrey L. Winsor","orcid":"https://orcid.org/0000-0001-6848-1638"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"funder","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Geoffrey L Winsor","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050640673","display_name":"Matthew R. Laird","orcid":"https://orcid.org/0000-0003-0967-3175"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"funder","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Matthew R Laird","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032907885","display_name":"Karin Breuer","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"funder","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Karin Breuer","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004236558","display_name":"Amir Foroushani","orcid":"https://orcid.org/0000-0003-2748-3009"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"funder","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Amir K Foroushani","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050197558","display_name":"Fiona S. L. Brinkman","orcid":"https://orcid.org/0000-0002-0584-4099"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"funder","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Fiona SL Brinkman","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, V5A 1S6, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066530115","display_name":"Robert E. W. Hancock","orcid":"https://orcid.org/0000-0001-5989-8503"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"funder","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Robert EW Hancock","raw_affiliation_strings":["Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada"],"affiliations":[{"raw_affiliation_string":"Centre for Microbial Diseases and Immunity Research,University of British Columbia, 232 - 2259 Lower Mall, Vancouver, British Columbia, V6T 1Z4, Canada","institution_ids":["https://openalex.org/I141945490"]}]}],"institution_assertions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":4.68,"has_fulltext":true,"fulltext_origin":"pdf","cited_by_count":75,"citation_normalized_percentile":{"value":0.862416,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"4","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.9933,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.9933,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9931,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9889,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.8597994}],"concepts":[{"id":"https://openalex.org/C136449434","wikidata":"https://www.wikidata.org/wiki/Q428253","display_name":"Innate immune system","level":3,"score":0.8715124},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.8597994},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.63239855},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5024736},{"id":"https://openalex.org/C193419808","wikidata":"https://www.wikidata.org/wiki/Q1645075","display_name":"Acquired immune system","level":3,"score":0.48729312},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.46818578},{"id":"https://openalex.org/C2779341262","wikidata":"https://www.wikidata.org/wiki/Q182581","display_name":"Immunity","level":3,"score":0.44542754},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.23378563},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.20486692},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17088488},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08329803}],"mesh":[{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":"","qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":"","qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014158","descriptor_name":"Transcription, Genetic","qualifier_ui":"","qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-4-117","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-4-117","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://europepmc.org/articles/pmc2936296","pdf_url":"https://europepmc.org/articles/pmc2936296?pdf=render","source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":["European Bioinformatics Institute"],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"http://summit.sfu.ca/item/11058","pdf_url":"https://summit.sfu.ca/_flysystem/fedora/sfu_migrate/11058/1752-0509-4-117.pdf","source":{"id":"https://openalex.org/S4306400490","display_name":"Summit (Simon Fraser University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I18014758","host_organization_name":"Simon Fraser University","host_organization_lineage":["https://openalex.org/I18014758"],"host_organization_lineage_names":["Simon Fraser University"],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hdl.handle.net/2429/56921","pdf_url":"https://open.library.ubc.ca/media/download/pdf/52383/1.0224003/2","source":{"id":"https://openalex.org/S4377196297","display_name":"cIRcle (University of British Columbia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I141945490","host_organization_name":"University of British Columbia","host_organization_lineage":["https://openalex.org/I141945490"],"host_organization_lineage_names":["University of British Columbia"],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hdl.handle.net/10147/121245","pdf_url":"https://www.lenus.ie/bitstream/10147/121245/1/20727158.pdf","source":{"id":"https://openalex.org/S4306401756","display_name":"Lenus, The Irish Health Repository (Dr Steevens Hospital Library)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hdl.handle.net/11019/265","pdf_url":"https://t-stor.teagasc.ie/bitstream/11019/265/1/1752-0509-4-117.pdf","source":{"id":"https://openalex.org/S4306402356","display_name":"T-St\u00f3r (Teagasc)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I141766778","host_organization_name":"Teagasc - The Irish Agriculture and Food Development Authority","host_organization_lineage":["https://openalex.org/I141766778"],"host_organization_lineage_names":["Teagasc - The Irish Agriculture and Food Development Authority"],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936296","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20727158","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1186/1752-0509-4-117","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/1752-0509-4-117","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.54}],"grants":[],"datasets":[],"versions":[],"referenced_works_count":70,"referenced_works":["https://openalex.org/W1489883635","https://openalex.org/W1964314587","https://openalex.org/W1968134126","https://openalex.org/W1976180663","https://openalex.org/W1986661099","https://openalex.org/W1989026631","https://openalex.org/W1994803330","https://openalex.org/W1997654031","https://openalex.org/W2000871561","https://openalex.org/W2002024777","https://openalex.org/W2006222585","https://openalex.org/W2006928776","https://openalex.org/W2006933206","https://openalex.org/W2013009523","https://openalex.org/W2035201715","https://openalex.org/W2037442572","https://openalex.org/W2038781914","https://openalex.org/W2040182688","https://openalex.org/W2043228781","https://openalex.org/W2043973101","https://openalex.org/W2048503857","https://openalex.org/W2053429123","https://openalex.org/W2054684559","https://openalex.org/W2064868405","https://openalex.org/W2065304353","https://openalex.org/W2069075668","https://openalex.org/W2071502814","https://openalex.org/W2075415644","https://openalex.org/W2075876669","https://openalex.org/W2077997913","https://openalex.org/W2087959682","https://openalex.org/W2091437500","https://openalex.org/W2093845596","https://openalex.org/W2095518178","https://openalex.org/W2097698606","https://openalex.org/W2097771645","https://openalex.org/W2103017472","https://openalex.org/W2104315543","https://openalex.org/W2104722369","https://openalex.org/W2105731567","https://openalex.org/W2108010925","https://openalex.org/W2109248504","https://openalex.org/W2111907482","https://openalex.org/W2112204472","https://openalex.org/W2113019448","https://openalex.org/W2113142309","https://openalex.org/W2116437559","https://openalex.org/W2117521332","https://openalex.org/W2118025286","https://openalex.org/W2123060905","https://openalex.org/W2130687290","https://openalex.org/W2132034930","https://openalex.org/W2134928825","https://openalex.org/W2136514583","https://openalex.org/W2138651252","https://openalex.org/W2141137217","https://openalex.org/W2147640266","https://openalex.org/W2150318080","https://openalex.org/W2152653671","https://openalex.org/W2155019453","https://openalex.org/W2155538302","https://openalex.org/W2156333187","https://openalex.org/W2158439765","https://openalex.org/W2159675211","https://openalex.org/W2161995310","https://openalex.org/W2163783674","https://openalex.org/W2335925695","https://openalex.org/W2916767477","https://openalex.org/W2917431650","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4313351689","https://openalex.org/W4225914417","https://openalex.org/W3030144597","https://openalex.org/W2951371476","https://openalex.org/W2498374562","https://openalex.org/W2135436588","https://openalex.org/W2087547757","https://openalex.org/W2050558417","https://openalex.org/W2009405916","https://openalex.org/W1551592253"],"abstract_inverted_index":{"The":[0],"innate":[1,34,86,103,160,194,209,221,251,271],"immune":[2,252],"response":[3],"is":[4,14,51,73,96],"the":[5,31,37,52,56,62,91,99,147,159,176,193,198,218,250,258],"first":[6],"line":[7],"of":[8,33,41,55,58,85,158,188,192,208,257,264,270],"defence":[9],"against":[10],"invading":[11],"pathogens":[12],"and":[13,19,39,61,77,101,110,130,141,167,174,205,224,233,235],"regulated":[15],"by":[16],"complex":[17],"signalling":[18],"transcriptional":[20,204],"networks.":[21,43,68],"Systems":[22],"biology":[23],"approaches":[24],"promise":[25],"to":[26,81,121,200,239,266],"shed":[27],"new":[28],"light":[29],"on":[30],"regulation":[32],"immunity":[35,104,161,195,222],"through":[36],"analysis":[38,173,191,269],"modelling":[40],"these":[42,67,212],"A":[44],"key":[45],"initial":[46],"step":[47],"in":[48,106,126,249],"this":[49,59],"process":[50],"contextual":[53,108],"cataloguing":[54],"components":[57],"system":[60],"molecular":[63,75],"interactions":[64,123,138],"that":[65,178,190],"comprise":[66],"InnateDB":[69,92,156,259],"(":[70],"http://www.innatedb.com":[71],")":[72],"a":[74,127,262],"interaction":[76],"pathway":[78,168],"database":[79],"developed":[80,120],"facilitate":[82],"systems-level":[83,172,268],"analyses":[84,213],"immunity.":[87,210,272],"Here,":[88,150],"we":[89,151,184],"describe":[90],"curation":[93,114,157,181,256],"project,":[94],"which":[95,117,242],"manually":[97],"annotating":[98],"human":[100],"mouse":[102],"interactome":[105,162,196,260],"rich":[107],"detail,":[109],"present":[111,152],"our":[112],"novel":[113,202],"software":[115],"system,":[116],"has":[118,163,197],"been":[119,144,247],"ensure":[122],"are":[124],"curated":[125,145],"highly":[128],"accurate":[129],"data-standards":[131],"compliant":[132],"manner.":[133],"To":[134],"date,":[135],"over":[136],"13,000":[137],"(protein,":[139],"DNA":[140],"RNA)":[142],"have":[143,245],"from":[146],"biomedical":[148],"literature.":[149],"data,":[153],"illustrating":[154],"how":[155],"greatly":[164],"enhanced":[165],"network":[166],"annotation":[169],"available":[170],"for":[171],"discuss":[175],"challenges":[177],"face":[179],"such":[180,228],"efforts.":[182],"Significantly,":[183],"provide":[185,215],"several":[186],"lines":[187],"evidence":[189],"potential":[199],"identify":[201],"signalling,":[203],"post-transcriptional":[206],"regulators":[207],"Additionally,":[211],"also":[214],"insight":[216],"into":[217],"cross-talk":[219],"between":[220],"pathways":[223],"other":[225,240],"biological":[226],"processes,":[227],"as":[229,243],"adaptive":[230],"immunity,":[231],"cancer":[232],"diabetes,":[234],"intriguingly,":[236],"suggests":[237],"links":[238],"pathways,":[241],"yet,":[244],"not":[246],"implicated":[248],"response.":[253],"In":[254],"summary,":[255],"provides":[261],"wealth":[263],"information":[265],"enable":[267]},"abstract_inverted_index_v3":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2170432219","counts_by_year":[{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":19}],"updated_date":"2025-03-18T01:12:43.049218","created_date":"2016-06-24"}