{"id":"https://openalex.org/W2137074596","doi":"https://doi.org/10.1109/ijcnn.2010.5596705","title":"DNA microarray analysis using Equalized Orthogonal Mapping","display_name":"DNA microarray analysis using Equalized Orthogonal Mapping","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W2137074596","doi":"https://doi.org/10.1109/ijcnn.2010.5596705","mag":"2137074596"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn.2010.5596705","pdf_url":null,"source":{"id":"https://openalex.org/S4363607707","display_name":"2022 International Joint Conference on Neural Networks (IJCNN)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"proceedings-article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049913930","display_name":"Jagdish C. Patra","orcid":"https://orcid.org/0000-0002-6257-0469"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Jagdish C. Patra","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University,,Singapore"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University,,Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077837987","display_name":"Nyttle V. George","orcid":null},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Nyttle V. George","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University,,Singapore"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University,,Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025809855","display_name":"Pramod Kumar Meher","orcid":"https://orcid.org/0000-0003-0992-1159"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Pramod K. Meher","raw_affiliation_strings":["Department of Communication Systems, Institute for Infocomm Research, Singapore#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Communication Systems, Institute for Infocomm Research, Singapore#TAB#","institution_ids":["https://openalex.org/I3005327000"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":0,"max":64},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9834,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9736,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/self-organizing-map","display_name":"Self-organizing map","score":0.68466747},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.63727415}],"concepts":[{"id":"https://openalex.org/C111168008","wikidata":"https://www.wikidata.org/wiki/Q1136838","display_name":"Self-organizing map","level":3,"score":0.68466747},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6820048},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.63727415},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.60420483},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.53475916},{"id":"https://openalex.org/C70518039","wikidata":"https://www.wikidata.org/wiki/Q16000077","display_name":"Dimensionality reduction","level":2,"score":0.47746897},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.46632034},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44793215},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.444809},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.41204488},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20938459},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.17571563},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16016659},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1411047},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10077962},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/ijcnn.2010.5596705","pdf_url":null,"source":{"id":"https://openalex.org/S4363607707","display_name":"2022 International Joint Conference on Neural Networks (IJCNN)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":21,"referenced_works":["https://openalex.org/W1679913846","https://openalex.org/W1727290854","https://openalex.org/W1973262132","https://openalex.org/W1985563591","https://openalex.org/W1991064092","https://openalex.org/W2013662344","https://openalex.org/W2035051484","https://openalex.org/W2043235003","https://openalex.org/W2076593049","https://openalex.org/W2080278322","https://openalex.org/W2096863518","https://openalex.org/W2109142308","https://openalex.org/W2109363337","https://openalex.org/W2110634300","https://openalex.org/W2123079177","https://openalex.org/W2138563982","https://openalex.org/W2147246240","https://openalex.org/W2152439110","https://openalex.org/W2157212746","https://openalex.org/W2169415399","https://openalex.org/W4237222446"],"related_works":["https://openalex.org/W4310366902","https://openalex.org/W3141198878","https://openalex.org/W3023720143","https://openalex.org/W2490137852","https://openalex.org/W2412120523","https://openalex.org/W2056932428","https://openalex.org/W2034551444","https://openalex.org/W1986892844","https://openalex.org/W170658859","https://openalex.org/W1483316219"],"abstract_inverted_index":{"Gene":[0],"expression":[1,10],"data":[2,59],"obtained":[3],"from":[4],"DNA":[5,57],"microarray":[6,58,82],"experiments":[7],"consists":[8],"of":[9,12,14,16,24,29,56,64,68,109,127,130,150,157,159],"levels":[11],"thousands":[13],"genes":[15],"only":[17,122],"a":[18,32,40,47,80],"few":[19],"samples.":[20],"Thus,":[21],"accurate":[22],"analysis":[23],"these":[25],"datasets":[26],"for":[27,60,74,103,125],"classification":[28,63,161],"cancer":[30,65],"is":[31,115],"big":[33],"challenge.":[34],"In":[35],"this":[36],"paper,":[37],"we":[38,146],"apply":[39],"novel":[41],"Equalized":[42],"Orthogonal":[43],"Map":[44,94],"(EOM)":[45],"as":[46],"dimension":[48],"reduction":[49],"technique":[50],"to":[51,99],"produce":[52,100],"topologically":[53],"correct":[54],"map":[55],"visualization":[61,75],"and":[62,76,84,106,163],"types.":[66],"Effectiveness":[67],"the":[69,90,110,151],"EOM":[70,96,114,152],"has":[71],"been":[72],"investigated":[73],"self":[77],"organization":[78],"using":[79],"benchmark":[81],"dataset":[83],"its":[85],"performance":[86],"was":[87,97],"compared":[88],"with":[89],"Kohonen's":[91],"Self":[92],"Organizing":[93],"(SOM).":[95],"able":[98],"100%":[101],"accuracy":[102,162],"both":[104],"FL":[105],"CLL":[107],"samples":[108,129],"lymphoma":[111],"dataset.":[112],"Furthermore,":[113],"computationally":[116],"more":[117,138],"efficient,":[118],"e.g.,":[119],"it":[120],"took":[121,137],"3":[123],"seconds":[124],"training":[126],"FL-CLL":[128],"Alizadeh":[131],"et":[132],"al.":[133],"dataset,":[134],"whereas":[135],"SOM":[136,154],"than":[139],"8":[140],"seconds.":[141],"With":[142],"extensive":[143],"simulation":[144],"results":[145],"have":[147],"illustrated":[148],"superiority":[149],"over":[153],"in":[155],"terms":[156],"quality":[158],"maps,":[160],"computational":[164],"complexity.":[165]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2137074596","counts_by_year":[],"updated_date":"2024-12-08T10:45:21.940089","created_date":"2016-06-24"}