{"id":"https://openalex.org/W2034646136","doi":"https://doi.org/10.1109/hisb.2012.23","title":"A Comparison of Computational Approaches in the Molecular Identification of Pathogenic Organisms","display_name":"A Comparison of Computational Approaches in the Molecular Identification of Pathogenic Organisms","publication_year":2012,"publication_date":"2012-09-01","ids":{"openalex":"https://openalex.org/W2034646136","doi":"https://doi.org/10.1109/hisb.2012.23","mag":"2034646136"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/hisb.2012.23","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"proceedings-article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102932572","display_name":"Dhundy R. Bastola","orcid":"https://orcid.org/0000-0002-5630-7576"},"institutions":[{"id":"https://openalex.org/I122266389","display_name":"University of Nebraska at Omaha","ror":"https://ror.org/04yrkc140","country_code":"US","type":"education","lineage":["https://openalex.org/I122266389"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dhundy R. Bastola","raw_affiliation_strings":["Sch. of Interdiscipl. Inf., Univ. of Nebraska at Omaha, Omaha, NE, USA"],"affiliations":[{"raw_affiliation_string":"Sch. of Interdiscipl. Inf., Univ. of Nebraska at Omaha, Omaha, NE, USA","institution_ids":["https://openalex.org/I122266389"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087144022","display_name":"Scott McGrath","orcid":"https://orcid.org/0000-0002-0065-726X"},"institutions":[{"id":"https://openalex.org/I122266389","display_name":"University of Nebraska at Omaha","ror":"https://ror.org/04yrkc140","country_code":"US","type":"education","lineage":["https://openalex.org/I122266389"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Scott McGrath","raw_affiliation_strings":["Sch. of Interdiscipl. Inf., Univ. of Nebraska at Omaha, Omaha, NE, USA"],"affiliations":[{"raw_affiliation_string":"Sch. of Interdiscipl. Inf., Univ. of Nebraska at Omaha, Omaha, NE, USA","institution_ids":["https://openalex.org/I122266389"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064623347","display_name":"Sanjukta Bhowmick","orcid":"https://orcid.org/0000-0001-8550-5371"},"institutions":[{"id":"https://openalex.org/I122266389","display_name":"University of Nebraska at Omaha","ror":"https://ror.org/04yrkc140","country_code":"US","type":"education","lineage":["https://openalex.org/I122266389"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sanjukta Bhowmick","raw_affiliation_strings":["Department of Computer Science University of Nebraska at Omaha Omaha, NE USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science University of Nebraska at Omaha Omaha, NE USA","institution_ids":["https://openalex.org/I122266389"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008692578","display_name":"Ishwor Thapa","orcid":"https://orcid.org/0000-0002-3594-1631"},"institutions":[{"id":"https://openalex.org/I122266389","display_name":"University of Nebraska at Omaha","ror":"https://ror.org/04yrkc140","country_code":"US","type":"education","lineage":["https://openalex.org/I122266389"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ishwor Thapa","raw_affiliation_strings":["Sch. of Interdiscipl. Inf., Univ. of Nebraska at Omaha, Omaha, NE, USA"],"affiliations":[{"raw_affiliation_string":"Sch. of Interdiscipl. Inf., Univ. of Nebraska at Omaha, Omaha, NE, USA","institution_ids":["https://openalex.org/I122266389"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":0,"max":64},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T12317","display_name":"Actinomycetales infections and treatment","score":0.9982,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12317","display_name":"Actinomycetales infections and treatment","score":0.9982,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9766,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.9591,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rpob","display_name":"rpoB","score":0.7182415},{"id":"https://openalex.org/keywords/identification","display_name":"Identification","score":0.6948135},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5104303}],"concepts":[{"id":"https://openalex.org/C2778340795","wikidata":"https://www.wikidata.org/wiki/Q24782946","display_name":"rpoB","level":4,"score":0.7182415},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6948135},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.62246853},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5104303},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48238483},{"id":"https://openalex.org/C67905577","wikidata":"https://www.wikidata.org/wiki/Q215980","display_name":"Ribosomal RNA","level":3,"score":0.45174527},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.41927266},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.39347243},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25468075},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.1964437},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19631565},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.06417227}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/hisb.2012.23","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4213311514","https://openalex.org/W3201980636","https://openalex.org/W3092857160","https://openalex.org/W2800888530","https://openalex.org/W2737307664","https://openalex.org/W2392589856","https://openalex.org/W2380633793","https://openalex.org/W2371089364","https://openalex.org/W2369514935","https://openalex.org/W2146581074"],"abstract_inverted_index":{"Molecular":[0],"based":[1,60],"identification":[2],"of":[3,52,63],"pathogenic":[4],"organism":[5],"is":[6,17,74],"becoming":[7],"a":[8],"routine":[9],"procedure":[10],"in":[11],"many":[12],"diagnostic":[13],"laboratories.":[14],"Ribosomal":[15],"RNA":[16],"particularly":[18],"the":[19,50],"most":[20],"popular":[21],"choice":[22],"for":[23,83],"this":[24],"purpose.":[25],"Although,":[26],"other":[27,86],"targets":[28,82],"such":[29,80],"as":[30],"`cytochrome":[31],"b',":[32],"`rpoB'":[33],"and":[34,85],"`actin'":[35],"are":[36],"highly":[37],"effective,":[38],"they":[39],"have":[40],"not":[41],"been":[42],"extensively":[43],"used.":[44],"This":[45,72],"could":[46],"be":[47],"due":[48],"to":[49,67,78],"lack":[51],"effective":[53],"data":[54],"collection":[55],"method.":[56],"We":[57],"used":[58],"sequence":[59,65],"exhaustive":[61],"search":[62],"public":[64],"database":[66],"obtain":[68],"all":[69],"target":[70],"sequences.":[71],"approach":[73],"currently":[75],"being":[76],"extended":[77],"collect":[79],"molecular":[81],"Nocardia":[84],"slow":[87],"growing":[88],"medically":[89],"important":[90],"organisms.":[91]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2034646136","counts_by_year":[],"updated_date":"2024-12-11T09:18:53.888927","created_date":"2016-06-24"}