{"id":"https://openalex.org/W4294975500","doi":"https://doi.org/10.1109/embc48229.2022.9871824","title":"Automatic Segmentation of Target Structures for Total Marrow and Lymphoid Irradiation in Bone Marrow Transplantation","display_name":"Automatic Segmentation of Target Structures for Total Marrow and Lymphoid Irradiation in Bone Marrow Transplantation","publication_year":2022,"publication_date":"2022-07-11","ids":{"openalex":"https://openalex.org/W4294975500","doi":"https://doi.org/10.1109/embc48229.2022.9871824","pmid":"https://pubmed.ncbi.nlm.nih.gov/36086265"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871824","pdf_url":null,"source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"proceedings-article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100690272","display_name":"Jun Shi","orcid":"https://orcid.org/0000-0002-9888-6238"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Shi","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100358064","display_name":"Zhaohui Wang","orcid":"https://orcid.org/0009-0002-7793-0292"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaohui Wang","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050940305","display_name":"Hongyu Kan","orcid":null},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongyu Kan","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060754938","display_name":"Minfan Zhao","orcid":"https://orcid.org/0009-0008-4524-4830"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minfan Zhao","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074045013","display_name":"Xudong Xue","orcid":null},"institutions":[{"id":"https://openalex.org/I4210160841","display_name":"Hubei Cancer Hospital","ror":"https://ror.org/05p38yh32","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210160841"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xudong Xue","raw_affiliation_strings":["Tongji Medical College, Huzhong University of Science and Technology,Hubei Cancer Hospital,Wuhan,Hubei,China,430074"],"affiliations":[{"raw_affiliation_string":"Tongji Medical College, Huzhong University of Science and Technology,Hubei Cancer Hospital,Wuhan,Hubei,China,430074","institution_ids":["https://openalex.org/I4210160841"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029654177","display_name":"Bing Yan","orcid":"https://orcid.org/0000-0001-5430-4761"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bing Yan","raw_affiliation_strings":["University of Science and Technology of China,The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine,The department of radiation oncology,Hefei,Anhui,China,230001"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China,The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine,The department of radiation oncology,Hefei,Anhui,China,230001","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085758579","display_name":"Hong An","orcid":"https://orcid.org/0000-0002-3900-3722"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong An","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China,Hefei,Anhui,China,210026","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027044461","display_name":"Jianjun Shen","orcid":"https://orcid.org/0000-0002-9101-0938"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"funder","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianjun Shen","raw_affiliation_strings":["University of Science and Technology of China,The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine,The department of radiation oncology,Hefei,Anhui,China,230001"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China,The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine,The department of radiation oncology,Hefei,Anhui,China,230001","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007055702","display_name":"Joseph W. Bartlett","orcid":"https://orcid.org/0000-0003-0684-088X"},"institutions":[{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"funder","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Joseph Bartlett","raw_affiliation_strings":["School of Computer Science, University of Birmingham,Edgbaston,Birmingham,United Kingdom,B15 2TT"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Birmingham,Edgbaston,Birmingham,United Kingdom,B15 2TT","institution_ids":["https://openalex.org/I79619799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087159264","display_name":"Wenqi Lu","orcid":"https://orcid.org/0000-0002-7838-0918"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"funder","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Wenqi Lu","raw_affiliation_strings":["University of Warwick,Department of Computer Science,Coventry,United Kingdom,CV4 7AL"],"affiliations":[{"raw_affiliation_string":"University of Warwick,Department of Computer Science,Coventry,United Kingdom,CV4 7AL","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078754523","display_name":"Jinming Duan","orcid":"https://orcid.org/0000-0002-5108-2128"},"institutions":[{"id":"https://openalex.org/I79619799","display_name":"University of Birmingham","ror":"https://ror.org/03angcq70","country_code":"GB","type":"funder","lineage":["https://openalex.org/I79619799"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jinming Duan","raw_affiliation_strings":["School of Computer Science, University of Birmingham,Edgbaston,Birmingham,United Kingdom,B15 2TT"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Birmingham,Edgbaston,Birmingham,United Kingdom,B15 2TT","institution_ids":["https://openalex.org/I79619799"]}]}],"institution_assertions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.554,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.581738,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":84,"max":86},"biblio":{"volume":null,"issue":null,"first_page":"5025","last_page":"5029"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9869,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9869,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9864,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11227","display_name":"Diabetic Foot Ulcer Assessment and Management","score":0.9769,"subfield":{"id":"https://openalex.org/subfields/2712","display_name":"Endocrinology, Diabetes and Metabolism"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.670007},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.625559},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.61912346},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.60638875},{"id":"https://openalex.org/C2779104521","wikidata":"https://www.wikidata.org/wiki/Q23058469","display_name":"Contouring","level":2,"score":0.58761656},{"id":"https://openalex.org/C2780007613","wikidata":"https://www.wikidata.org/wiki/Q546523","display_name":"Bone marrow","level":2,"score":0.56785655},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.53772515},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4915627},{"id":"https://openalex.org/C2994180119","wikidata":"https://www.wikidata.org/wiki/Q1128050","display_name":"Bone marrow transplantation","level":3,"score":0.47620165},{"id":"https://openalex.org/C2911091166","wikidata":"https://www.wikidata.org/wiki/Q106419912","display_name":"Transplantation","level":2,"score":0.43448007},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.38371032},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3614361},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.18803114},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18238041},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.1031394},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001853","descriptor_name":"Bone Marrow","qualifier_ui":"","qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015182","descriptor_name":"Lymphatic Irradiation","qualifier_ui":"","qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001853","descriptor_name":"Bone Marrow","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D016026","descriptor_name":"Bone Marrow Transplantation","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":"","qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/embc48229.2022.9871824","pdf_url":null,"source":{"id":"https://openalex.org/S4363607706","display_name":"2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},{"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36086265","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.66,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"grants":[],"datasets":[],"versions":[],"referenced_works_count":18,"referenced_works":["https://openalex.org/W1901129140","https://openalex.org/W2160666689","https://openalex.org/W2194775991","https://openalex.org/W2798122215","https://openalex.org/W2884436604","https://openalex.org/W2900237898","https://openalex.org/W2907750714","https://openalex.org/W2964309882","https://openalex.org/W2998623274","https://openalex.org/W3088209586","https://openalex.org/W3112701542","https://openalex.org/W3127751679","https://openalex.org/W3138516171","https://openalex.org/W3165185971","https://openalex.org/W3204166336","https://openalex.org/W3204614423","https://openalex.org/W4212875960","https://openalex.org/W4385245566"],"related_works":["https://openalex.org/W4312417841","https://openalex.org/W4226493464","https://openalex.org/W3133861977","https://openalex.org/W3103566983","https://openalex.org/W3029198973","https://openalex.org/W2968335000","https://openalex.org/W2951211570","https://openalex.org/W2915337797","https://openalex.org/W2360204191","https://openalex.org/W2028761375"],"abstract_inverted_index":{"The":[0,130],"use":[1],"of":[2,11,32,112,116],"total":[3],"marrow":[4,16],"and":[5,27,38,54,69,119,127,158],"lymphoid":[6],"irradiation":[7,46],"(TMLI)":[8],"as":[9,36,64],"part":[10],"conditioning":[12],"regimens":[13],"for":[14,103],"bone":[15,37],"transplantation":[17],"is":[18,51,114],"trending":[19],"due":[20],"to":[21,56,97],"its":[22],"advantages":[23],"in":[24,45,76,162],"disease":[25],"control":[26],"low":[28],"toxicity.":[29],"Accurate":[30],"contouring":[31],"target":[33,101],"structures":[34,102],"such":[35,63],"lymph":[39,163],"nodes":[40],"plays":[41],"an":[42],"important":[43],"role":[44],"planning.":[47,85],"However,":[48],"this":[49,87],"process":[50],"often":[52],"time-consuming":[53],"prone":[55],"inter-observer":[57],"variation.":[58],"Recently,":[59],"deep":[60],"learning":[61],"methods":[62],"convolutional":[65],"neural":[66],"networks":[67],"(CNNs)":[68],"vision":[70,120],"transformers":[71],"have":[72],"achieved":[73],"tremendous":[74],"success":[75],"medical":[77],"image":[78],"segmentation,":[79],"therefore":[80,143],"enabling":[81],"fast":[82],"semiautomatic":[83],"radiotherapy":[84],"In":[86],"paper,":[88],"we":[89],"propose":[90],"a":[91,159],"dual-encoder":[92],"U-shaped":[93],"model":[94,124],"named":[95],"DE-Net,":[96],"automatically":[98],"segment":[99],"the":[100,107,110,134,152],"TMLI.":[104],"To":[105],"enhance":[106],"learned":[108],"features,":[109],"encoder":[111],"DE-Net":[113],"composed":[115],"parallel":[117],"CNNs":[118],"transformers,":[121],"which":[122],"can":[123],"both":[125],"local":[126],"global":[128],"contexts.":[129],"multi-level":[131],"features":[132],"from":[133],"two":[135],"branches":[136],"are":[137],"progressively":[138],"fused":[139],"by":[140],"intermediate":[141],"modules,":[142],"effectively":[144],"preserving":[145],"low-level":[146],"details.":[147],"Our":[148],"experiments":[149],"demonstrate":[150],"that":[151],"proposed":[153],"method":[154],"achieves":[155],"state-of-the-art":[156],"results":[157],"significant":[160],"improvement":[161],"node":[164],"segmentation":[165],"compared":[166],"with":[167],"existing":[168],"methods.":[169]},"abstract_inverted_index_v3":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W4294975500","counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5}],"updated_date":"2025-04-19T03:08:54.759102","created_date":"2022-09-08"}