{"id":"https://openalex.org/W2510808263","doi":"https://doi.org/10.1109/cbms.2016.48","title":"Automatic Neuron Tracing Using a Locally Tunable Approach","display_name":"Automatic Neuron Tracing Using a Locally Tunable Approach","publication_year":2016,"publication_date":"2016-06-01","ids":{"openalex":"https://openalex.org/W2510808263","doi":"https://doi.org/10.1109/cbms.2016.48","mag":"2510808263"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2016.48","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"proceedings-article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055976035","display_name":"Ludovica Acciai","orcid":"https://orcid.org/0000-0001-5241-1758"},"institutions":[{"id":"https://openalex.org/I155125353","display_name":"Universit\u00e0 Campus Bio-Medico","ror":"https://ror.org/04gqx4x78","country_code":"IT","type":"education","lineage":["https://openalex.org/I155125353"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Ludovica Acciai","raw_affiliation_strings":["Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma, Italy","institution_ids":["https://openalex.org/I155125353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003216983","display_name":"Paolo Soda","orcid":"https://orcid.org/0000-0003-2621-072X"},"institutions":[{"id":"https://openalex.org/I155125353","display_name":"Universit\u00e0 Campus Bio-Medico","ror":"https://ror.org/04gqx4x78","country_code":"IT","type":"education","lineage":["https://openalex.org/I155125353"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Soda","raw_affiliation_strings":["Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma, Italy","institution_ids":["https://openalex.org/I155125353"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084631519","display_name":"Giulio Iannello","orcid":"https://orcid.org/0000-0003-3864-5800"},"institutions":[{"id":"https://openalex.org/I155125353","display_name":"Universit\u00e0 Campus Bio-Medico","ror":"https://ror.org/04gqx4x78","country_code":"IT","type":"education","lineage":["https://openalex.org/I155125353"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giulio Iannello","raw_affiliation_strings":["Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma, Italy","institution_ids":["https://openalex.org/I155125353"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.571,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":1,"citation_normalized_percentile":{"value":0.633411,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":66,"max":73},"biblio":{"volume":null,"issue":null,"first_page":"130","last_page":"135"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9999,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9999,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9974,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9606,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.76832485},{"id":"https://openalex.org/keywords/neurite","display_name":"Neurite","score":0.5796551},{"id":"https://openalex.org/keywords/trace","display_name":"TRACE (psycholinguistics)","score":0.44278404}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.798854},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.76832485},{"id":"https://openalex.org/C113246987","wikidata":"https://www.wikidata.org/wiki/Q1534415","display_name":"Neurite","level":3,"score":0.5796551},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5412973},{"id":"https://openalex.org/C57493831","wikidata":"https://www.wikidata.org/wiki/Q3134666","display_name":"Projection (relational algebra)","level":2,"score":0.53176695},{"id":"https://openalex.org/C75291252","wikidata":"https://www.wikidata.org/wiki/Q1315756","display_name":"TRACE (psycholinguistics)","level":2,"score":0.44278404},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.42603332},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4033814},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.39792153},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.31032342},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.195977},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C202751555","wikidata":"https://www.wikidata.org/wiki/Q221681","display_name":"In vitro","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2016.48","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":32,"referenced_works":["https://openalex.org/W1427337929","https://openalex.org/W1508135620","https://openalex.org/W1510655293","https://openalex.org/W1590564964","https://openalex.org/W1971167883","https://openalex.org/W1989396876","https://openalex.org/W1997013306","https://openalex.org/W2001658278","https://openalex.org/W2011650974","https://openalex.org/W2019305522","https://openalex.org/W2033813088","https://openalex.org/W2036901575","https://openalex.org/W2036984232","https://openalex.org/W2042967751","https://openalex.org/W2048733914","https://openalex.org/W2058632330","https://openalex.org/W2061628168","https://openalex.org/W2061858728","https://openalex.org/W2084972763","https://openalex.org/W2108436498","https://openalex.org/W2110918734","https://openalex.org/W2123360522","https://openalex.org/W2124257654","https://openalex.org/W2152255315","https://openalex.org/W2153965609","https://openalex.org/W2156012604","https://openalex.org/W2156114286","https://openalex.org/W2157408013","https://openalex.org/W2157700389","https://openalex.org/W2160308091","https://openalex.org/W2169528473","https://openalex.org/W2296206204"],"related_works":["https://openalex.org/W4299652732","https://openalex.org/W4248091533","https://openalex.org/W2963744171","https://openalex.org/W2789571330","https://openalex.org/W2366233132","https://openalex.org/W2362901774","https://openalex.org/W2133304975","https://openalex.org/W2115308562","https://openalex.org/W2043182207","https://openalex.org/W1515178292"],"abstract_inverted_index":{"Neuroscience":[0],"has":[1],"been":[2],"interested":[3],"in":[4,49],"cellular":[5],"neuroanatomy":[6],"since":[7],"the":[8,15,25,72,83,86,98,103,106,113,119,135],"time":[9],"of":[10,18,28,82,88,105],"Ram\u00f3n":[11],"y":[12],"Cajal.":[13],"Although":[14],"manual":[16],"reconstruction":[17],"neuron":[19],"morphologies":[20],"is":[21],"still":[22],"widely":[23],"used,":[24],"recent":[26],"availability":[27],"large":[29],"image":[30],"data":[31],"asks":[32],"for":[33],"automatic":[34,44],"or":[35],"semi-automatic":[36],"tools.":[37],"In":[38],"this":[39],"paper":[40],"we":[41],"present":[42],"an":[43],"method":[45],"to":[46,97,102,118],"trace":[47],"neurites":[48,60],"3D":[50],"volumes":[51],"based":[52],"on":[53,85,112],"two":[54],"main":[55],"steps.":[56],"The":[57,92],"first":[58],"detects":[59,74],"connected":[61],"with":[62],"a":[63,68,79],"given":[64],"seed":[65],"that":[66],"satisfy":[67],"conservative":[69],"membership":[70],"rule,":[71],"second":[73],"weak":[75],"neurite":[76],"chunks":[77],"allowing":[78],"local":[80,89,93],"growth":[81],"arbor":[84],"basis":[87],"intensity":[90],"features.":[91],"step":[94],"also":[95],"accommodates":[96],"nonuniform":[99],"illumination":[100],"and":[101],"noise":[104],"sample.":[107],"We":[108],"tested":[109],"our":[110],"proposal":[111],"Olfactory":[114],"Projection":[115],"dataset":[116],"belonging":[117],"well-known":[120],"DIADEM":[121],"challenge,":[122],"comparing":[123],"its":[124],"performance":[125],"against":[126],"those":[127],"achieved":[128],"by":[129],"other":[130],"state-of-the-art":[131],"methods":[132],"available":[133],"within":[134],"BigNeuron":[136],"Project.":[137]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2510808263","counts_by_year":[{"year":2018,"cited_by_count":1}],"updated_date":"2024-12-09T03:52:33.682258","created_date":"2016-09-16"}