{"id":"https://openalex.org/W2058921505","doi":"https://doi.org/10.1109/bibm.2013.6732757","title":"Communities analysis in protein-protein interaction networks","display_name":"Communities analysis in protein-protein interaction networks","publication_year":2013,"publication_date":"2013-12-01","ids":{"openalex":"https://openalex.org/W2058921505","doi":"https://doi.org/10.1109/bibm.2013.6732757","mag":"2058921505"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2013.6732757","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"proceedings-article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100342160","display_name":"Kan Li","orcid":"https://orcid.org/0000-0003-3528-4739"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"funder","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kan Li","raw_affiliation_strings":["School of Computer Science Technology, Beijing Institute of Technology, Beijing, China#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science Technology, Beijing Institute of Technology, Beijing, China#TAB#","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013159710","display_name":"Yin Pang","orcid":null},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"funder","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yin Pang","raw_affiliation_strings":["Beijing Sch. of Comput. Sci. Technol., Beijing Inst. of Technol., Beijing, China"],"affiliations":[{"raw_affiliation_string":"Beijing Sch. of Comput. Sci. Technol., Beijing Inst. of Technol., Beijing, China","institution_ids":["https://openalex.org/I125839683"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":1,"citation_normalized_percentile":{"value":0.385064,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":65,"max":72},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.9883,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9661,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multipartite","display_name":"Multipartite","score":0.67836547},{"id":"https://openalex.org/keywords/social-network-analysis","display_name":"Social Network Analysis","score":0.46291903}],"concepts":[{"id":"https://openalex.org/C197657726","wikidata":"https://www.wikidata.org/wiki/Q174733","display_name":"Bipartite graph","level":3,"score":0.84037465},{"id":"https://openalex.org/C166733315","wikidata":"https://www.wikidata.org/wiki/Q6934831","display_name":"Multipartite","level":4,"score":0.67836547},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.65354055},{"id":"https://openalex.org/C133079900","wikidata":"https://www.wikidata.org/wiki/Q5155065","display_name":"Community structure","level":2,"score":0.64971143},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5105678},{"id":"https://openalex.org/C114713312","wikidata":"https://www.wikidata.org/wiki/Q7551269","display_name":"Social network analysis","level":3,"score":0.46291903},{"id":"https://openalex.org/C189950617","wikidata":"https://www.wikidata.org/wiki/Q937228","display_name":"Property (philosophy)","level":2,"score":0.4517528},{"id":"https://openalex.org/C2781311116","wikidata":"https://www.wikidata.org/wiki/Q83306","display_name":"Group (periodic table)","level":2,"score":0.43871498},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.41559935},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.26280156},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24449426},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.18593478},{"id":"https://openalex.org/C121040770","wikidata":"https://www.wikidata.org/wiki/Q215675","display_name":"Quantum entanglement","level":3,"score":0.13426402},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.087276846},{"id":"https://openalex.org/C518677369","wikidata":"https://www.wikidata.org/wiki/Q202833","display_name":"Social media","level":2,"score":0.06407267},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C84114770","wikidata":"https://www.wikidata.org/wiki/Q46344","display_name":"Quantum","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2013.6732757","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2952287968","https://openalex.org/W2950685989","https://openalex.org/W2374654911","https://openalex.org/W2371352078","https://openalex.org/W2347515247","https://openalex.org/W2143516466","https://openalex.org/W2094758646","https://openalex.org/W2085437413","https://openalex.org/W2056683690","https://openalex.org/W1606665185"],"abstract_inverted_index":{"No":[0],"common":[1],"definition":[2,39,53],"of":[3,15,22,31,36],"community":[4,38,66,77,91,107,136],"has":[5],"been":[6],"agreed":[7],"upon":[8],"till":[9],"now.":[10],"One":[11],"topology":[12],"can":[13],"be":[14,61],"different":[16],"types,":[17],"uni-partite":[18],"or":[19,125],"bipartite/multipartite.":[20],"Most":[21],"the":[23,34,37,42,48,52,55,65,89,102,134,142],"former":[24],"literatures":[25],"are":[26],"proposed":[27],"for":[28],"one":[29],"type":[30],"community.":[32],"As":[33],"understanding":[35],"is":[40,118],"different,":[41],"grouping":[43,56],"results":[44,113],"always":[45],"applicable":[46,119],"to":[47,105,120],"specified":[49],"network.":[50,143],"If":[51],"changes,":[54],"result":[57],"will":[58],"no":[59],"longer":[60],"\"good\".":[62],"To":[63],"do":[64],"detection":[67,78],"in":[68,88,109,133,141],"mixed":[69],"protein-protein":[70],"interaction":[71],"(PPI)":[72],"networks,":[73],"we":[74],"propose":[75],"a":[76],"method":[79,117],"with":[80,130],"two":[81],"steps.":[82],"Firstly,":[83],"group":[84],"vertices":[85,97,129,140],"\"must":[86],"be\"":[87],"same":[90,135],"by":[92,98],"properties;":[93],"secondly,":[94],"find":[95,106],"overlapping":[96,139],"functions.":[99],"We":[100],"apply":[101],"energy":[103],"model":[104],"structure":[108],"PPI":[110,121],"networks.":[111],"The":[112],"show":[114],"that":[115],"our":[116],"network,":[122],"unipartite,":[123],"bipartite":[124],"mixed.":[126],"It":[127],"groups":[128],"similar":[131],"property/roles":[132],"and":[137],"finds":[138]},"abstract_inverted_index_v3":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2058921505","counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2025-03-20T21:58:29.412095","created_date":"2016-06-24"}