{"id":"https://openalex.org/W2959745021","doi":"https://doi.org/10.1093/bioinformatics/btz550","title":"HDX-Viewer: interactive 3D visualization of hydrogen\u2013deuterium exchange data","display_name":"HDX-Viewer: interactive 3D visualization of hydrogen\u2013deuterium exchange data","publication_year":2019,"publication_date":"2019-07-08","ids":{"openalex":"https://openalex.org/W2959745021","doi":"https://doi.org/10.1093/bioinformatics/btz550","mag":"2959745021","pmid":"https://pubmed.ncbi.nlm.nih.gov/31287496","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/6954641"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz550","pdf_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311647","https://openalex.org/P4310311648"],"host_organization_lineage_names":["University of Oxford","Oxford University Press"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088363557","display_name":"David Bouyssi\u00e9","orcid":"https://orcid.org/0000-0002-0847-4759"},"institutions":[{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/004raaa70","country_code":"FR","type":"funder","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I4210096427","https://openalex.org/I4210099749"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"David Bouyssi\u00e9","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035913128","display_name":"Jean Lesn\u00e9","orcid":"https://orcid.org/0000-0003-3632-3859"},"institutions":[{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I4210096427","https://openalex.org/I4210099749"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/004raaa70","country_code":"FR","type":"funder","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I134560555"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean Lesne","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I4210099749","https://openalex.org/I1294671590","https://openalex.org/I17866349","https://openalex.org/I134560555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032011511","display_name":"Marie Locard\u2010Paulet","orcid":"https://orcid.org/0000-0003-2879-9224"},"institutions":[{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/004raaa70","country_code":"FR","type":"funder","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I4210096427","https://openalex.org/I4210099749"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Marie Locard-Paulet","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059413679","display_name":"Renaud Albigot","orcid":null},"institutions":[{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/004raaa70","country_code":"FR","type":"funder","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I4210096427","https://openalex.org/I4210099749"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Renaud Albigot","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069577241","display_name":"Odile Burlet\u2010Schiltz","orcid":"https://orcid.org/0000-0002-3606-2356"},"institutions":[{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/004raaa70","country_code":"FR","type":"funder","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I4210096427","https://openalex.org/I4210099749"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Odile Burlet-Schiltz","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062431644","display_name":"Julien Marcoux","orcid":"https://orcid.org/0000-0001-7321-7436"},"institutions":[{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 de Toulouse","ror":"https://ror.org/004raaa70","country_code":"FR","type":"funder","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I4210096427","https://openalex.org/I4210099749"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Julien Marcoux","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]}],"institution_assertions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"funder","lineage":["https://openalex.org/I124055696"]}],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032011511","https://openalex.org/A5062431644"],"corresponding_institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590","https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.236,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":25,"citation_normalized_percentile":{"value":0.819872,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":92,"max":93},"biblio":{"volume":"35","issue":"24","first_page":"5331","last_page":"5333"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9992,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9992,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11407","display_name":"Innovative Microfluidic and Catalytic Techniques Innovation","score":0.999,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10908","display_name":"Analytical Chemistry and Chromatography","score":0.999,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.46450374}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.73991585},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.63241583},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.58731014},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.47033033},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.46450374},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3453985},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.28920507},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.23352572},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.16416675}],"mesh":[{"descriptor_ui":"D041961","descriptor_name":"Deuterium Exchange Measurement","qualifier_ui":"","qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003903","descriptor_name":"Deuterium","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"","qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"","qualifier_name":null,"is_major_topic":false}],"locations_count":10,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz550","pdf_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311647","https://openalex.org/P4310311648"],"host_organization_lineage_names":["University of Oxford","Oxford University Press"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-02332392","pdf_url":"https://hal.science/hal-02332392/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":["Centre National de la Recherche Scientifique"],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":false,"landing_page_url":"https://hal.science/hal-02332392","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},{"is_oa":true,"landing_page_url":"https://europepmc.org/articles/pmc6954641","pdf_url":"https://europepmc.org/articles/pmc6954641?pdf=render","source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":["European Bioinformatics Institute"],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hal.science/hal-02332392/file/btz550.pdf","pdf_url":"https://hal.science/hal-02332392/file/btz550.pdf","source":null,"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-02332392/document","pdf_url":"https://hal.archives-ouvertes.fr/hal-02332392/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":["Centre National de la Recherche Scientifique"],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://curis.ku.dk/ws/files/235922135/btz550.pdf","pdf_url":"https://curis.ku.dk/ws/files/235922135/btz550.pdf","source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":["University of Copenhagen"],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-02332392/file/btz550.pdf","pdf_url":"https://hal.archives-ouvertes.fr/hal-02332392/file/btz550.pdf","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":["Centre National de la Recherche Scientifique"],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6954641","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31287496","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz550","pdf_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311647","https://openalex.org/P4310311648"],"host_organization_lineage_names":["University of Oxford","Oxford University Press"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[{"score":0.51,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"grants":[{"funder":"https://openalex.org/F4320325957","funder_display_name":"Novo Nordisk Fonden","award_id":"NNF14CC0001"}],"datasets":[],"versions":[],"referenced_works_count":16,"referenced_works":["https://openalex.org/W1965079584","https://openalex.org/W1967147564","https://openalex.org/W1977984247","https://openalex.org/W2023505696","https://openalex.org/W2084692275","https://openalex.org/W2094580354","https://openalex.org/W2108674457","https://openalex.org/W2120326808","https://openalex.org/W2466387107","https://openalex.org/W2474169383","https://openalex.org/W2581851121","https://openalex.org/W2806399642","https://openalex.org/W2911948414","https://openalex.org/W2920047938","https://openalex.org/W2951230445","https://openalex.org/W4235940105"],"related_works":["https://openalex.org/W4321854979","https://openalex.org/W4312214821","https://openalex.org/W3037018281","https://openalex.org/W2972592048","https://openalex.org/W2944823289","https://openalex.org/W2497626292","https://openalex.org/W2390344072","https://openalex.org/W2367815957","https://openalex.org/W2358319515","https://openalex.org/W2003209439"],"abstract_inverted_index":{"With":[0],"the":[1,38,130],"advent":[2],"of":[3],"fully":[4],"automated":[5],"sample":[6],"preparation":[7],"robots":[8],"for":[9,22,59],"Hydrogen-Deuterium":[10],"eXchange":[11],"coupled":[12],"to":[13,111],"Mass":[14],"Spectrometry":[15],"(HDX-MS),":[16],"this":[17,74],"method":[18],"has":[19],"become":[20],"paramount":[21],"ligand":[23],"binding":[24],"or":[25,101],"epitope":[26],"mapping":[27],"screening,":[28],"both":[29],"in":[30,105],"academic":[31],"research":[32],"and":[33,48,64,85,108,121,133,137],"biopharmaceutical":[34],"industries.":[35],"However,":[36],"bridging":[37],"gap":[39],"between":[40],"commercial":[41,102],"HDX-MS":[42,87,95,103],"software":[43,104],"(for":[44],"raw":[45],"data":[46,88,96],"interpretation)":[47,61],"molecular":[49,115],"viewers":[50],"(to":[51],"map":[52],"experiment":[53],"results":[54],"onto":[55],"a":[56,98],"3D":[57,114],"structure":[58],"biological":[60,122],"remains":[62],"laborious":[63],"requires":[65],"simple":[66],"but":[67],"sometimes":[68],"limiting":[69],"coding":[70],"skills.":[71],"We":[72],"solved":[73],"bottleneck":[75],"by":[76],"developing":[77],"HDX-Viewer,":[78],"an":[79,112],"open-source":[80],"web-based":[81],"application":[82,92,126],"that":[83],"facilitates":[84],"quickens":[86],"analysis.":[89],"This":[90],"user-friendly":[91],"automatically":[93],"incorporates":[94],"from":[97],"custom":[99],"template":[100],"PDB":[106],"files,":[107],"uploads":[109],"them":[110],"online":[113],"viewer,":[116],"thereby":[117],"facilitating":[118],"their":[119],"visualization":[120],"interpretation.The":[123],"HDX-Viewer":[124],"web":[125],"is":[127,146],"released":[128],"under":[129],"CeCILL":[131],"(http://www.cecill.info)":[132],"GNU":[134],"LGPL":[135],"licenses":[136],"can":[138],"be":[139],"found":[140],"at":[141,148],"https://masstools.ipbs.fr/hdx-viewer.":[142],"The":[143],"source":[144],"code":[145],"available":[147],"https://github.com/david-bouyssie/hdx-viewer.":[149]},"abstract_inverted_index_v3":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2959745021","counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":7}],"updated_date":"2025-02-26T23:22:27.908786","created_date":"2019-07-23"}