{"id":"https://openalex.org/W3212820871","doi":"https://doi.org/10.1007/978-3-030-91415-8_45","title":"ScDA: A Denoising AutoEncoder Based Dimensionality Reduction for Single-cell RNA-seq Data","display_name":"ScDA: A Denoising AutoEncoder Based Dimensionality Reduction for Single-cell RNA-seq Data","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3212820871","doi":"https://doi.org/10.1007/978-3-030-91415-8_45","mag":"3212820871"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-91415-8_45","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"book series"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"book-chapter","type_crossref":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050334773","display_name":"Xiaoshu Zhu","orcid":"https://orcid.org/0000-0002-7696-9112"},"institutions":[{"id":"https://openalex.org/I27462735","display_name":"Yulin Normal University","ror":"https://ror.org/00445hv47","country_code":"CN","type":"education","lineage":["https://openalex.org/I27462735"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoshu Zhu","raw_affiliation_strings":["School of Computer Science and Engineering, Yulin Normal University, Yulin, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Yulin Normal University, Yulin, China","institution_ids":["https://openalex.org/I27462735"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018256382","display_name":"Yongchang Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I27462735","display_name":"Yulin Normal University","ror":"https://ror.org/00445hv47","country_code":"CN","type":"education","lineage":["https://openalex.org/I27462735"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongchang Lin","raw_affiliation_strings":["School of Computer Science and Engineering, Yulin Normal University, Yulin, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Yulin Normal University, Yulin, China","institution_ids":["https://openalex.org/I27462735"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100402427","display_name":"Jian Li","orcid":"https://orcid.org/0000-0001-7953-8230"},"institutions":[{"id":"https://openalex.org/I27462735","display_name":"Yulin Normal University","ror":"https://ror.org/00445hv47","country_code":"CN","type":"education","lineage":["https://openalex.org/I27462735"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Li","raw_affiliation_strings":["School of Computer Science and Engineering, Yulin Normal University, Yulin, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Yulin Normal University, Yulin, China","institution_ids":["https://openalex.org/I27462735"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100438360","display_name":"Jianxin Wang","orcid":"https://orcid.org/0000-0003-1516-0480"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianxin Wang","raw_affiliation_strings":["Hunan Provincial Key Lab On Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab On Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103182832","display_name":"Xiaoqing Peng","orcid":"https://orcid.org/0000-0002-4099-5183"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoqing Peng","raw_affiliation_strings":["Center for Medical Genetics School of Life Sciences, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"Center for Medical Genetics School of Life Sciences, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392,"provenance":"doaj"},"apc_paid":null,"fwci":0.822,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.622085,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":57,"max":67},"biblio":{"volume":null,"issue":null,"first_page":"534","last_page":"545"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9778,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10773","display_name":"Extracellular vesicles in disease","score":0.9537,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.8684659},{"id":"https://openalex.org/keywords/clustering-high-dimensional-data","display_name":"Clustering high-dimensional data","score":0.45447785}],"concepts":[{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.8684659},{"id":"https://openalex.org/C70518039","wikidata":"https://www.wikidata.org/wiki/Q16000077","display_name":"Dimensionality reduction","level":2,"score":0.83660305},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.70647764},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6288391},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.59659475},{"id":"https://openalex.org/C163294075","wikidata":"https://www.wikidata.org/wiki/Q581861","display_name":"Noise reduction","level":2,"score":0.56718826},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.55940074},{"id":"https://openalex.org/C33676613","wikidata":"https://www.wikidata.org/wiki/Q13415176","display_name":"Dimension (graph theory)","level":2,"score":0.47685015},{"id":"https://openalex.org/C184509293","wikidata":"https://www.wikidata.org/wiki/Q5136711","display_name":"Clustering high-dimensional data","level":3,"score":0.45447785},{"id":"https://openalex.org/C111030470","wikidata":"https://www.wikidata.org/wiki/Q1430460","display_name":"Curse of dimensionality","level":2,"score":0.44833946},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.43240276},{"id":"https://openalex.org/C111335779","wikidata":"https://www.wikidata.org/wiki/Q3454686","display_name":"Reduction (mathematics)","level":2,"score":0.42619914},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34974873},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3331741},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.25632247},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15845084},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-91415-8_45","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319965","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Springer Nature","Springer Science+Business Media"],"type":"book series"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":43,"referenced_works":["https://openalex.org/W1552434751","https://openalex.org/W1666901150","https://openalex.org/W2030017878","https://openalex.org/W2084107549","https://openalex.org/W2135937351","https://openalex.org/W2137065828","https://openalex.org/W2156483112","https://openalex.org/W2307567449","https://openalex.org/W2316095770","https://openalex.org/W2463988862","https://openalex.org/W2472063172","https://openalex.org/W2510746232","https://openalex.org/W2580989000","https://openalex.org/W2598326928","https://openalex.org/W2625783081","https://openalex.org/W2747545374","https://openalex.org/W2755681539","https://openalex.org/W2757764553","https://openalex.org/W2767423581","https://openalex.org/W2788348358","https://openalex.org/W2791285756","https://openalex.org/W2792647356","https://openalex.org/W2793411374","https://openalex.org/W2888562574","https://openalex.org/W2902652978","https://openalex.org/W2906625258","https://openalex.org/W2907783748","https://openalex.org/W2912390237","https://openalex.org/W2927507212","https://openalex.org/W2937917790","https://openalex.org/W2941510527","https://openalex.org/W2943399314","https://openalex.org/W2945570991","https://openalex.org/W2950372712","https://openalex.org/W2952016241","https://openalex.org/W2955621471","https://openalex.org/W3003444384","https://openalex.org/W3005127469","https://openalex.org/W3007166960","https://openalex.org/W3017924613","https://openalex.org/W3111450319","https://openalex.org/W3134128419","https://openalex.org/W4235169531"],"related_works":["https://openalex.org/W4310873165","https://openalex.org/W3037110488","https://openalex.org/W2355395139","https://openalex.org/W2187269125","https://openalex.org/W2166963679","https://openalex.org/W2074396517","https://openalex.org/W1995622179","https://openalex.org/W1641615907","https://openalex.org/W1552543208","https://openalex.org/W1484111231"],"abstract_inverted_index":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W3212820871","counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2024-12-06T16:01:27.470910","created_date":"2021-11-22"}