{"id":"https://openalex.org/W4253490510","doi":"https://doi.org/10.1002/spe.733","title":"Bio\u2010Broker: a tool for integration of biological data sources and data analysis tools","display_name":"Bio\u2010Broker: a tool for integration of biological data sources and data analysis tools","publication_year":2006,"publication_date":"2006-07-13","ids":{"openalex":"https://openalex.org/W4253490510","doi":"https://doi.org/10.1002/spe.733"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1002/spe.733","pdf_url":null,"source":{"id":"https://openalex.org/S122199241","display_name":"Software Practice and Experience","issn_l":"0038-0644","issn":["0038-0644","1097-024X"],"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"journal-article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109584497","display_name":"J. F. Aldana","orcid":null},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"funder","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J. F. Aldana","raw_affiliation_strings":["E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010272554","display_name":"M. Rold\u00e1n\u2010Castro","orcid":null},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"funder","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Rold\u00e1n\u2010Castro","raw_affiliation_strings":["E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038234325","display_name":"Ismael Navas\u2010Delgado","orcid":"https://orcid.org/0000-0001-7819-5416"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"funder","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"I. Navas","raw_affiliation_strings":["E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067853288","display_name":"Mar\u00eda del Mar Rold\u00e1n\u2010Garc\u00eda","orcid":"https://orcid.org/0000-0002-1470-2017"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"funder","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. M. Rold\u00e1n\u2010Garc\u00eda","raw_affiliation_strings":["E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010004442","display_name":"Manuel Hidalgo-Conde","orcid":null},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"funder","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Hidalgo\u2010Conde","raw_affiliation_strings":["E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082510742","display_name":"Oswaldo Trelles","orcid":"https://orcid.org/0000-0003-1554-8987"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"funder","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"O. Trelles","raw_affiliation_strings":["E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"E.T.S.I. Inform\u00e1tica, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]}]}],"institution_assertions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5082510742"],"corresponding_institution_ids":["https://openalex.org/I82767444"],"apc_list":{"value":4220,"currency":"USD","value_usd":4220},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":5,"citation_normalized_percentile":{"value":0.796674,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":76,"max":78},"biblio":{"volume":"36","issue":"14","first_page":"1585","last_page":"1604"},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9934,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9934,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9913,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9908,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5581233}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7580521},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.7008866},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5581233},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5235478},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.46534905},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.42877734},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.40993112},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.33578825},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33016488},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.24534482},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.13190007},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1002/spe.733","pdf_url":null,"source":{"id":"https://openalex.org/S122199241","display_name":"Software Practice and Experience","issn_l":"0038-0644","issn":["0038-0644","1097-024X"],"is_oa":false,"is_in_doaj":false,"is_indexed_in_scopus":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"datasets":[],"versions":[],"referenced_works_count":24,"referenced_works":["https://openalex.org/W1535627680","https://openalex.org/W1638026557","https://openalex.org/W1978227866","https://openalex.org/W2003786983","https://openalex.org/W2009966494","https://openalex.org/W2043223042","https://openalex.org/W2050490959","https://openalex.org/W2095602394","https://openalex.org/W2096126766","https://openalex.org/W2097793061","https://openalex.org/W2101795508","https://openalex.org/W2130251346","https://openalex.org/W2130479394","https://openalex.org/W2132582966","https://openalex.org/W2135613155","https://openalex.org/W2146851759","https://openalex.org/W2158714788","https://openalex.org/W2160948978","https://openalex.org/W2252034896","https://openalex.org/W3004312480","https://openalex.org/W4213149192","https://openalex.org/W4231967076","https://openalex.org/W4242044952","https://openalex.org/W4255855797"],"related_works":["https://openalex.org/W4232385698","https://openalex.org/W365436934","https://openalex.org/W2378005410","https://openalex.org/W2373609955","https://openalex.org/W2170435352","https://openalex.org/W2164873654","https://openalex.org/W2123397376","https://openalex.org/W2048876619","https://openalex.org/W1987533665","https://openalex.org/W1967797047"],"abstract_inverted_index":{"Abstract":[0],"In":[1],"this":[2],"work":[3],"we":[4],"present":[5],"an":[6],"architecture":[7,36],"for":[8,15,24,79],"XML\u2010based":[9],"mediator":[10,62,118],"systems":[11,17],"and":[12,46,55,93,105,121,137,147,155],"a":[13,64,70,117,123,144],"framework":[14],"helping":[16],"developers":[18],"in":[19,57],"the":[20,25,58,67,114],"construction":[21],"of":[22,27,34,66,107,116,126],"mediator\u2010services":[23],"integration":[26],"heterogeneous":[28],"data":[29,59,72,133,152],"sources.":[30],"A":[31,83],"unique":[32],"feature":[33],"our":[35,108],"is":[37],"its":[38],"capability":[39],"to":[40,90,142],"manage":[41],"(proprietary)":[42],"user's":[43],"software":[44],"tools":[45,154],"algorithms,":[47],"modelled":[48],"as":[49,69,141],"Extended":[50],"Value":[51],"Added":[52],"Services":[53],"(EVASs),":[54],"integrated":[56],"flow.":[60],"The":[61,103],"offers":[63],"view":[65],"system":[68,119],"single":[71],"source":[73],"where":[74],"EVASs":[75,95],"are":[76],"readily":[77],"available":[78],"enhancing":[80],"query":[81],"processing.":[82],"Web\u2010based":[84],"graphic":[85],"interface":[86],"has":[87,110],"been":[88,111],"developed":[89],"allow":[91],"dynamic":[92],"flexible":[94],"inter\u2010connection,":[96],"thus":[97],"creating":[98],"complex":[99],"distributed":[100],"bioinformatics":[101],"machines.":[102],"feasibility":[104],"usefulness":[106],"ideas":[109],"validated":[112],"by":[113,122],"development":[115],"(Bio\u2010Broker)":[120],"diverse":[124],"set":[125],"applications":[127],"aimed":[128],"at":[129],"combining":[130],"gene":[131],"expression":[132],"with":[134],"genomic,":[135],"sequence\u2010based":[136],"structural":[138],"information,":[139],"so":[140],"provide":[143],"general,":[145],"transparent":[146],"powerful":[148],"solution":[149],"that":[150],"integrates":[151],"analysis":[153],"algorithms.":[156],"Copyright":[157],"\u00a9":[158],"2006":[159],"John":[160],"Wiley":[161],"&":[162],"Sons,":[163],"Ltd.":[164]},"abstract_inverted_index_v3":null,"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W4253490510","counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-03-21T12:53:33.893078","created_date":"2022-05-12"}