{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,8,11]],"date-time":"2024-08-11T21:50:52Z","timestamp":1723413052804},"reference-count":24,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2018,8,3]],"date-time":"2018-08-03T00:00:00Z","timestamp":1533254400000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100009318","name":"Helmholtz Association","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100009318","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["DI 1721\/3-1"],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100007601","name":"Horizon 2020","doi-asserted-by":"publisher","award":["720270","754304"],"id":[{"id":"10.13039\/501100007601","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Neuroinform."],"DOI":"10.3389\/fninf.2018.00046","type":"journal-article","created":{"date-parts":[[2018,8,3]],"date-time":"2018-08-03T09:27:08Z","timestamp":1533288428000},"update-policy":"http:\/\/dx.doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":29,"title":["Reproducing Polychronization: A Guide to Maximizing the Reproducibility of Spiking Network Models"],"prefix":"10.3389","volume":"12","author":[{"given":"Robin","family":"Pauli","sequence":"first","affiliation":[]},{"given":"Philipp","family":"Weidel","sequence":"additional","affiliation":[]},{"given":"Susanne","family":"Kunkel","sequence":"additional","affiliation":[]},{"given":"Abigail","family":"Morrison","sequence":"additional","affiliation":[]}],"member":"1965","published-online":{"date-parts":[[2018,8,3]]},"reference":[{"key":"B1","unstructured":"Artifact Review and Badging2016"},{"key":"B2","doi-asserted-by":"publisher","first-page":"62","DOI":"10.1145\/2812803","article-title":"Repeatability in computer systems research","volume":"59","author":"Collberg","year":"2016","journal-title":"Commun. ACM"},{"key":"B3","doi-asserted-by":"publisher","first-page":"1430","DOI":"10.4249\/scholarpedia.1430","article-title":"NEST (NEural Simulation Tool)","volume":"2","author":"Gewaltig","year":"2007","journal-title":"Scholarpedia"},{"key":"B4","doi-asserted-by":"publisher","first-page":"124","DOI":"10.12688\/f1000research.10783.2","article-title":"A very simple, re-executable neuroimaging publication","volume":"6","author":"Ghosh","year":"2017","journal-title":"F1000Research"},{"key":"B5","doi-asserted-by":"crossref","unstructured":"GleesonP. CantarelliM. MarinB. QuintanaA. EarnshawM. PiasiniE. Open Source Brain: a collaborative resource for visualizing, analyzing, simulating and developing standardized models of neurons and circuits. 2018","DOI":"10.1101\/229484"},{"key":"B6","doi-asserted-by":"publisher","first-page":"e38234","DOI":"10.1371\/journal.pone.0038234","article-title":"The effects of FreeSurfer version, workstation type, and Macintosh operating system version on anatomical volume and cortical thickness measurements","volume":"7","author":"Gronenschild","year":"2012","journal-title":"PLoS ONE"},{"key":"B7","doi-asserted-by":"publisher","first-page":"3697","DOI":"10.1523\/JNEUROSCI.23-09-03697.2003","article-title":"Learning input correlations through nonlinear temporally asymmetric hebbian plasticity","volume":"23","author":"G\u00fctig","year":"2003","journal-title":"J. Neurosci."},{"key":"B8","doi-asserted-by":"crossref","first-page":"467","DOI":"10.1162\/089976698300017845","article-title":"On numerical simulations of integrate-and-fire neural networks","volume":"10","author":"Hansel","year":"1998","journal-title":"Neural Comput."},{"key":"B9","doi-asserted-by":"publisher","first-page":"1063","DOI":"10.1109\/TNN.2004.832719","article-title":"Which model to use for cortical spiking neurons?","volume":"15","author":"Izhikevich","year":"2004","journal-title":"IEEE Trans. Neural Netw."},{"key":"B10","doi-asserted-by":"publisher","first-page":"245","DOI":"10.1162\/089976606775093882","article-title":"Polychronization: computation with spikes","volume":"18","author":"Izhikevich","year":"2006","journal-title":"Neural Comput."},{"key":"B11","doi-asserted-by":"publisher","first-page":"2520","DOI":"10.1093\/bioinformatics\/bts480","article-title":"Snakemake\u2013a scalable bioinformatics workflow engine","volume":"28","author":"K\u00f6ster","year":"2012","journal-title":"Bioinformatics"},{"key":"B12","doi-asserted-by":"publisher","first-page":"459","DOI":"10.1007\/s00422-008-0233-1","article-title":"Phenomenological models of synaptic plasticity based on spike timing","volume":"98","author":"Morrison","year":"2008","journal-title":"Biol. Cybernet."},{"key":"B13","doi-asserted-by":"publisher","first-page":"47","DOI":"10.1162\/neco.2007.19.1.47","article-title":"Exact subthreshold integration with continuous spike times in discrete-time neural network simulations","volume":"19","author":"Morrison","year":"2007","journal-title":"Neural Comput."},{"key":"B14","doi-asserted-by":"publisher","first-page":"e1000456","DOI":"10.1371\/journal.pcbi.1000456","article-title":"Towards reproducible descriptions of neuronal network models","volume":"5","author":"Nordlie","year":"2009","journal-title":"PLoS Comput. Biol."},{"key":"B15","doi-asserted-by":"publisher","author":"Peyser","year":"2017","DOI":"10.5281\/zenodo.882971"},{"key":"B16","doi-asserted-by":"publisher","first-page":"76","DOI":"10.3389\/fninf.2017.00076","article-title":"Reproducibility vs. replicability: a brief history of a confused terminology","volume":"11","author":"Plesser","year":"2018","journal-title":"Front. Neuroinformatics"},{"key":"B17","doi-asserted-by":"publisher","first-page":"41","DOI":"10.3389\/fncom.2017.00041","article-title":"Detection and evaluation of spatio-temporal spike patterns in massively parallel spike train data with spade","volume":"11","author":"Quaglio","year":"2017","journal-title":"Front. Comput. Neurosci."},{"key":"B18","doi-asserted-by":"publisher","first-page":"e142","DOI":"10.7717\/peerj-cs.142","article-title":"Sustainable computational science: the ReScience initiative","volume":"3","author":"Rougier","year":"2017","journal-title":"PeerJ Comp. Sci."},{"key":"B19","doi-asserted-by":"publisher","first-page":"e19428","DOI":"10.7554\/eLife.19428","article-title":"Cell assemblies at multiple time scales with arbitrary lag constellations","volume":"6","author":"Russo","year":"2017","journal-title":"Elife"},{"key":"B20","doi-asserted-by":"crossref","first-page":"243","DOI":"10.1007\/978-3-319-53862-4_21","article-title":"A collaborative simulation-analysis workflow for computational neuroscience using HPC","volume-title":"High-Performance Scientific Computing","author":"Senk","year":"2017"},{"key":"B21","doi-asserted-by":"publisher","first-page":"919","DOI":"10.1038\/78829","article-title":"Competitive Hebbian learning through spike-timing-dependent synaptic plasticity","volume":"3","author":"Song","year":"2000","journal-title":"Nat. Neurosci."},{"key":"B22","doi-asserted-by":"publisher","first-page":"30","DOI":"10.3389\/fncom.2015.00030","article-title":"A long journey into reproducible computational neuroscience","volume":"9","author":"Topalidou","year":"2015","journal-title":"Front. Comput. Neurosci."},{"key":"B23","doi-asserted-by":"publisher","first-page":"132","DOI":"10.3389\/fncom.2013.00132","article-title":"Statistical evaluation of synchronous spike patterns extracted by frequent item set mining","volume":"7","author":"Torre","year":"2013","journal-title":"Front. Comput. Neurosci."},{"key":"B24","article-title":"Rigorous neural network simulations: model cross-validation for boosting the correctness of simulation results","author":"Trensch","year":"","journal-title":"Front. Neuroinformatics"}],"container-title":["Frontiers in Neuroinformatics"],"original-title":[],"link":[{"URL":"https:\/\/www.frontiersin.org\/article\/10.3389\/fninf.2018.00046\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,10,21]],"date-time":"2019-10-21T16:22:59Z","timestamp":1571674979000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.frontiersin.org\/article\/10.3389\/fninf.2018.00046\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,8,3]]},"references-count":24,"alternative-id":["10.3389\/fninf.2018.00046"],"URL":"https:\/\/doi.org\/10.3389\/fninf.2018.00046","relation":{},"ISSN":["1662-5196"],"issn-type":[{"value":"1662-5196","type":"electronic"}],"subject":[],"published":{"date-parts":[[2018,8,3]]}}}