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In this work, a structural cell model is created by combining information from various light microscopic and electron microscopic images as well as from publication-related data. At the mesoscopic level each cell component is presented with special structural and visual properties; at the molecular level a cell membrane composition and the underlying modeling method are discussed; and structural information is correlated with those at the functional level (represented by simplified energy-producing metabolic pathways).<\/jats:p>\n The organism used as an example is the unicellular Chlamydomonas reinhardtii<\/jats:italic>, which might be important in future alternative energy production processes. Based on the 3D model, an educative S3D animation was created which was shown at conferences. The complete workflow was accomplished by using the open source 3D modeling software Blender.<\/jats:p>\n The discussed project including the animation is available from: http:\/\/Cm5.CELLmicrocosmos.org<\/jats:ext-link>\n <\/jats:p>","DOI":"10.1515\/jib-2018-0003","type":"journal-article","created":{"date-parts":[[2018,7,12]],"date-time":"2018-07-12T11:06:01Z","timestamp":1531393561000},"source":"Crossref","is-referenced-by-count":9,"title":["Heuristic Modeling and 3D Stereoscopic Visualization of a Chlamydomonas reinhardtii<\/i> Cell"],"prefix":"10.1515","volume":"15","author":[{"given":"Niklas","family":"Biere","sequence":"first","affiliation":[{"name":"Experimental Biophysics and Applied Nanoscience, Faculty of Physics , Bielefeld University , Bielefeld , Germany"}]},{"given":"Mehmood","family":"Ghaffar","sequence":"additional","affiliation":[{"name":"Bio-\/Medical Informatics Department, Faculty of Technology , Bielefeld University , Bielefeld , Germany"}]},{"given":"Anja","family":"Doebbe","sequence":"additional","affiliation":[{"name":"Algae Biotechnology and Bioenergy, Faculty of Biology , Bielefeld University , Bielefeld , Germany"}]},{"given":"Daniel","family":"J\u00e4ger","sequence":"additional","affiliation":[{"name":"Algae Biotechnology and Bioenergy, Faculty of Biology , Bielefeld University , Bielefeld , Germany"}]},{"given":"Nils","family":"Rothe","sequence":"additional","affiliation":[{"name":"Bio-\/Medical Informatics Department, Faculty of Technology , Bielefeld University , Bielefeld , Germany"}]},{"given":"Benjamin M.","family":"Friedrich","sequence":"additional","affiliation":[{"name":"Biological Algorithms Group, Center for Advancing Electronics Dresden , Technical University Dresden , Dresden , Germany"}]},{"given":"Ralf","family":"Hofest\u00e4dt","sequence":"additional","affiliation":[{"name":"Bio-\/Medical Informatics Department, Faculty of Technology , Bielefeld University , Bielefeld , Germany"}]},{"given":"Falk","family":"Schreiber","sequence":"additional","affiliation":[{"name":"Computational Life Sciences, Department of Computer and Information Science , University of Konstanz , Konstanz , Germany"},{"name":"Faculty of Information Technology , Monash University , Melbourne , Australia"}]},{"given":"Olaf","family":"Kruse","sequence":"additional","affiliation":[{"name":"Algae Biotechnology and Bioenergy, Faculty of Biology , Bielefeld University , Bielefeld , Germany"}]},{"given":"Bj\u00f6rn","family":"Sommer","sequence":"additional","affiliation":[{"name":"Computational Life Sciences, Department of Computer and Information Science , University of Konstanz , Konstanz , Germany"},{"name":"Faculty of Information Technology , Monash University , Melbourne , Australia"}]}],"member":"374","published-online":{"date-parts":[[2018,7,11]]},"reference":[{"key":"2023033120302590311_j_jib-2018-0003_ref_001_w2aab3b7b1b1b6b1ab1b7b1Aa","unstructured":"Reece JB, Urry LA, Cain ML, et al. 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