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This mostly aids in (i) virtual screening of functional monomers (FMs), (ii) optimization of monomer-template ratio, and (iii) selectivity analysis. We present MIRATE, an integrated science gateway for the intelligent design of MIPs. By combining and adapting multiple state-of-the-art bioinformatics tools into automated and innovative pipelines, MIRATE guides the user through the entire process of MIPs\u2019 design. The platform allows the user to fully customize each stage involved in the MIPs\u2019 design, with the main goal to support the synthesis in the wet-laboratory. Availability: MIRATE is freely accessible with no login requirement at http:\/\/mirate.di.univr.it\/<\/jats:ext-link>. All major browsers are supported.<\/jats:p>","DOI":"10.1515\/jib-2017-0075","type":"journal-article","created":{"date-parts":[[2018,6,13]],"date-time":"2018-06-13T22:51:14Z","timestamp":1528930274000},"source":"Crossref","is-referenced-by-count":8,"title":["MIRATE: MIps RATional dEsign Science Gateway"],"prefix":"10.1515","volume":"15","author":[{"given":"Mirko","family":"Busato","sequence":"first","affiliation":[{"name":"Department of Biotechnology , University of Verona , Strada Le Grazie 15 , 37134 Verona , Italy"}]},{"given":"Rosario","family":"Distefano","sequence":"additional","affiliation":[{"name":"Department Computer Science , University of Verona , Strada Le Grazie 15 , 37134 Verona , Italy"}]},{"given":"Ferdia","family":"Bates","sequence":"additional","affiliation":[{"name":"Institute of Technological Investigations , University of Coru\u00f1a (UDC) , Campus Esteiro , Ferrol 15402 , Spain"}]},{"given":"Kal","family":"Karim","sequence":"additional","affiliation":[{"name":"Leicester Biotechnology Group , Department of Chemistry , University of Leicester , LE1 7RH , Leicester , UK"}]},{"given":"Alessandra Maria","family":"Bossi","sequence":"additional","affiliation":[{"name":"Department of Biotechnology , University of Verona , Strada Le Grazie 15 , 37134 Verona , Italy"}]},{"given":"Jos\u00e9 Manuel","family":"L\u00f3pez Vilari\u00f1o","sequence":"additional","affiliation":[{"name":"Institute of Technological Investigations , University of Coru\u00f1a (UDC) , Campus Esteiro , Ferrol 15402 , Spain"}]},{"given":"Sergey","family":"Piletsky","sequence":"additional","affiliation":[{"name":"Leicester Biotechnology Group , Department of Chemistry , University of Leicester , LE1 7RH , Leicester , UK"}]},{"given":"Nicola","family":"Bombieri","sequence":"additional","affiliation":[{"name":"Department Computer Science , University of Verona , Strada Le Grazie 15 , 37134 Verona , Italy"}]},{"given":"Alejandro","family":"Giorgetti","sequence":"additional","affiliation":[{"name":"Department of Biotechnology , University of Verona , Strada Le Grazie 15 , 37134 Verona , Italy"}]}],"member":"374","published-online":{"date-parts":[[2018,6,13]]},"reference":[{"key":"2023033120003908939_j_jib-2017-0075_ref_001_w2aab3b7b3b1b6b1ab1b7b1Aa","doi-asserted-by":"crossref","unstructured":"Whitcombe MJ, Kirsch N, Nicholls IA. 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