乐胖代购免代理版

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The method uses a novel indexing structure called the marker array. Using the marker array, we can genotype variants with respect from large panels like the 1000 Genomes Project while reducing the reference bias that results when aligning to a single linear reference. can infer accurate genotypes in less time and memory compared to existing graph-based methods. The method is implemented in the open source software tool available at https:\/\/github.com\/alshai\/rowbowt<\/jats:ext-link>.<\/jats:p>","DOI":"10.1186\/s13015-023-00225-3","type":"journal-article","created":{"date-parts":[[2023,5,5]],"date-time":"2023-05-05T10:02:17Z","timestamp":1683280937000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":4,"title":["Pangenomic genotyping with the marker array"],"prefix":"10.1186","volume":"18","author":[{"given":"Taher","family":"Mun","sequence":"first","affiliation":[]},{"given":"Naga Sai Kavya","family":"Vaddadi","sequence":"additional","affiliation":[]},{"given":"Ben","family":"Langmead","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2023,5,5]]},"reference":[{"issue":"7","key":"225_CR1","doi-asserted-by":"publisher","first-page":"1104","DOI":"10.1038\/s41588-021-00877-0","volume":"53","author":"RW Davies","year":"2021","unstructured":"Davies RW, Kucka M, Su D, Shi S, Flanagan M, Cunniff CM, Chan YF, Myers S. 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MARIA: multiple-alignment $$r$$-index with aggregation. 2022. arXiv 2209.09218."}],"container-title":["Algorithms for Molecular Biology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s13015-023-00225-3.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1186\/s13015-023-00225-3\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s13015-023-00225-3.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,5]],"date-time":"2023-05-05T10:03:34Z","timestamp":1683281014000},"score":1,"resource":{"primary":{"URL":"https:\/\/almob.biomedcentral.com\/articles\/10.1186\/s13015-023-00225-3"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,5,5]]},"references-count":35,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2023,12]]}},"alternative-id":["225"],"URL":"https:\/\/doi.org\/10.1186\/s13015-023-00225-3","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2022.05.19.492566","asserted-by":"object"}]},"ISSN":["1748-7188"],"issn-type":[{"value":"1748-7188","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,5,5]]},"assertion":[{"value":"31 March 2023","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"22 April 2023","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"5 May 2023","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare that they have no competing interests.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}],"article-number":"2"}}