{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T00:17:04Z","timestamp":1740097024118,"version":"3.37.3"},"publisher-location":"New York, NY, USA","reference-count":32,"publisher":"ACM","license":[{"start":{"date-parts":[[2014,11,7]],"date-time":"2014-11-07T00:00:00Z","timestamp":1415318400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"funder":[{"DOI":"10.13039\/100007092","name":"Rensselaer Polytechnic Institute","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100007092","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100006754","name":"U.S. Army Research Laboratory","doi-asserted-by":"publisher","award":["W911NF-09-2-0053 (NS-CTA)"],"id":[{"id":"10.13039\/100006754","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000145","name":"Division of Information and Intelligent Systems","doi-asserted-by":"publisher","award":["IIS-0953149"],"id":[{"id":"10.13039\/100000145","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100006785","name":"Google","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006785","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000185","name":"Defense Advanced Research Projects Agency","doi-asserted-by":"publisher","award":["FA8750-13-2-0041"],"id":[{"id":"10.13039\/100000185","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2014,11,7]]},"DOI":"10.1145\/2665970.2665974","type":"proceedings-article","created":{"date-parts":[[2014,11,3]],"date-time":"2014-11-03T14:41:51Z","timestamp":1415025711000},"page":"3-4","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":4,"title":["Entity Linking for Biomedical Literature"],"prefix":"10.1145","author":[{"given":"Jin Guang","family":"Zheng","sequence":"first","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]},{"given":"Daniel","family":"Howsmon","sequence":"additional","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]},{"given":"Boliang","family":"Zhang","sequence":"additional","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]},{"given":"Juergen","family":"Hahn","sequence":"additional","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]},{"given":"Deborah","family":"McGuinness","sequence":"additional","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]},{"given":"James","family":"Hendler","sequence":"additional","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]},{"given":"Heng","family":"Ji","sequence":"additional","affiliation":[{"name":"Rensselaer Polytechnic Institute, Troy, NY, USA"}]}],"member":"320","published-online":{"date-parts":[[2014,11,7]]},"reference":[{"key":"e_1_3_2_1_1_1","volume-title":"Proceedings of BioNLP 2011 Workshop","author":"Abacha A. B.","year":"2011","unstructured":"A. B. Abacha and P. Zweigenbaum . Medical entity recognition: A comparison of semantic and statistical methods . In Proceedings of BioNLP 2011 Workshop , 2011 . A. B. Abacha and P. Zweigenbaum. Medical entity recognition: A comparison of semantic and statistical methods. In Proceedings of BioNLP 2011 Workshop, 2011."},{"key":"e_1_3_2_1_2_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-13-211"},{"key":"e_1_3_2_1_3_1","first-page":"1","volume-title":"International Conference on Research in Electrotechnology and Applied Informatics","volume":"1","author":"Biesiada J.","year":"2005","unstructured":"J. Biesiada , W. Duch , A. Kachel , K. Maczka , and S. Palucha . Feature ranking methods based on information entropy with parzen windows . In International Conference on Research in Electrotechnology and Applied Informatics , volume 1 , page 1 , 2005 . J. Biesiada, W. Duch, A. Kachel, K. Maczka, and S. Palucha. Feature ranking methods based on information entropy with parzen windows. In International Conference on Research in Electrotechnology and Applied Informatics, volume 1, page 1, 2005."},{"key":"e_1_3_2_1_4_1","first-page":"155","volume-title":"Advances in neural information processing systems","author":"Bruce N.","year":"2005","unstructured":"N. Bruce and J. Tsotsos . Saliency based on information maximization . In Advances in neural information processing systems , pages 155 -- 162 , 2005 . N. Bruce and J. Tsotsos. Saliency based on information maximization. In Advances in neural information processing systems, pages 155--162, 2005."},{"key":"e_1_3_2_1_5_1","volume-title":"Proceedings of COLING 2012","author":"Cassidy T.","year":"2012","unstructured":"T. Cassidy , H. Ji , L. Ratinov , A. Zubiaga , and H. Huang . Analysis and enhancement of Wikification for microblogs with context expansion . In Proceedings of COLING 2012 , 2012 . T. Cassidy, H. Ji, L. Ratinov, A. Zubiaga, and H. Huang. Analysis and enhancement of Wikification for microblogs with context expansion. In Proceedings of COLING 2012, 2012."},{"key":"e_1_3_2_1_6_1","volume-title":"Proceedings of the 2013 Conference on Empirical Methods in Natural Language Processing","author":"Cheng X.","year":"2013","unstructured":"X. Cheng and D. Roth . Relational inference for Wikification . In Proceedings of the 2013 Conference on Empirical Methods in Natural Language Processing , 2013 . X. Cheng and D. Roth. Relational inference for Wikification. In Proceedings of the 2013 Conference on Empirical Methods in Natural Language Processing, 2013."},{"key":"e_1_3_2_1_7_1","volume-title":"Proc. TAC 2011 Workshop","author":"Cucerzan S.","year":"2011","unstructured":"S. Cucerzan . TAC entity linking by performing full-document entity extraction and disambiguation . In Proc. TAC 2011 Workshop , 2011 . S. Cucerzan. TAC entity linking by performing full-document entity extraction and disambiguation. In Proc. TAC 2011 Workshop, 2011."},{"key":"e_1_3_2_1_8_1","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2010.45"},{"key":"e_1_3_2_1_9_1","doi-asserted-by":"publisher","DOI":"10.5555\/1567619.1567627"},{"key":"e_1_3_2_1_10_1","doi-asserted-by":"publisher","DOI":"10.1145\/1871437.1871689"},{"key":"e_1_3_2_1_11_1","volume-title":"LitInspector: literature and signal transduction pathway mining in PubMed abstracts. Nucleic acids research, 37(suppl 2):W135--W140","author":"Frisch M.","year":"2009","unstructured":"M. Frisch , B. Klocke , M. Haltmeier , and K. Frech . LitInspector: literature and signal transduction pathway mining in PubMed abstracts. Nucleic acids research, 37(suppl 2):W135--W140 , 2009 . M. Frisch, B. Klocke, M. Haltmeier, and K. Frech. LitInspector: literature and signal transduction pathway mining in PubMed abstracts. Nucleic acids research, 37(suppl 2):W135--W140, 2009."},{"key":"e_1_3_2_1_12_1","volume-title":"Proc. IJCNLP2011","author":"Guo Y.","year":"2011","unstructured":"Y. Guo , W. Che , T. Liu , and S. Li . A graph-based method for entity linking . In Proc. IJCNLP2011 , 2011 . Y. Guo, W. Che, T. Liu, and S. Li. A graph-based method for entity linking. In Proc. IJCNLP2011, 2011."},{"issue":"3","key":"e_1_3_2_1_13_1","first-page":"412","article-title":"Overview of BioCreAtIvE Task 1B: Normalized gene lists","volume":"7","author":"Hirschman L.","year":"2005","unstructured":"L. Hirschman , M. Colosimo , A. Morgan , and A. Yeh . Overview of BioCreAtIvE Task 1B: Normalized gene lists . BMC Bioinformatics , 7 ( 3 ): 412 -- 420 , 2005 . L. Hirschman, M. Colosimo, A. Morgan, and A. Yeh. Overview of BioCreAtIvE Task 1B: Normalized gene lists. BMC Bioinformatics, 7(3):412--420, 2005.","journal-title":"BMC Bioinformatics"},{"key":"e_1_3_2_1_14_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.molcel.2006.02.012"},{"key":"e_1_3_2_1_15_1","volume-title":"Overview of the TAC 2011 knowledge base population track. In Text Analysis Conference (TAC) 2011","author":"Ji H.","year":"2011","unstructured":"H. Ji , R. Grishman , and H. Dang . Overview of the TAC 2011 knowledge base population track. In Text Analysis Conference (TAC) 2011 , 2011 . H. Ji, R. Grishman, and H. Dang. Overview of the TAC 2011 knowledge base population track. In Text Analysis Conference (TAC) 2011, 2011."},{"key":"e_1_3_2_1_16_1","volume-title":"Overview of the TAC 2010 knowledge base population track. In Text Analysis Conference (TAC) 2010","author":"Ji H.","year":"2010","unstructured":"H. Ji , R. Grishman , H. Dang , K. Griffitt , and J. Ellis . Overview of the TAC 2010 knowledge base population track. In Text Analysis Conference (TAC) 2010 , 2010 . H. Ji, R. Grishman, H. Dang, K. Griffitt, and J. Ellis. Overview of the TAC 2010 knowledge base population track. In Text Analysis Conference (TAC) 2010, 2010."},{"key":"e_1_3_2_1_17_1","doi-asserted-by":"publisher","DOI":"10.1145\/1557019.1557073"},{"key":"e_1_3_2_1_18_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtbi.2004.01.001"},{"key":"e_1_3_2_1_19_1","volume-title":"Proc. COLING","author":"Liu B.","year":"2010","unstructured":"B. Liu , L. Qian , H. Wang , and G. Zhou . Dependency-driven feature-based learning for extracting protein-protein interactions from biomedical text . In Proc. COLING , 2010 .\\balancecolumns B. Liu, L. Qian, H. Wang, and G. Zhou. Dependency-driven feature-based learning for extracting protein-protein interactions from biomedical text. In Proc. COLING, 2010.\\balancecolumns"},{"key":"e_1_3_2_1_20_1","volume-title":"Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)","author":"Liu X.","year":"2013","unstructured":"X. Liu , Y. Li , H. Wu , M. Zhou , F. Wei , and Y. Lu . Entity linking for tweets . In Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers) , 2013 . X. Liu, Y. Li, H. Wu, M. Zhou, F. Wei, and Y. Lu. Entity linking for tweets. In Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2013."},{"key":"e_1_3_2_1_21_1","doi-asserted-by":"publisher","DOI":"10.1145\/2063518.2063519"},{"key":"e_1_3_2_1_22_1","doi-asserted-by":"publisher","DOI":"10.1145\/1321440.1321475"},{"key":"e_1_3_2_1_23_1","doi-asserted-by":"publisher","DOI":"10.1145\/1458082.1458150"},{"key":"e_1_3_2_1_24_1","doi-asserted-by":"publisher","DOI":"10.5555\/1699510.1699527"},{"key":"e_1_3_2_1_25_1","volume-title":"The PageRank citation ranking: Bringing order to the web","author":"Page L.","year":"1999","unstructured":"L. Page , S. Brin , R. Motwani , and T. Winograd . The PageRank citation ranking: Bringing order to the web . 1999 . L. Page, S. Brin, R. Motwani, and T. Winograd. The PageRank citation ranking: Bringing order to the web. 1999."},{"key":"e_1_3_2_1_26_1","doi-asserted-by":"publisher","DOI":"10.5555\/1699510.1699542"},{"key":"e_1_3_2_1_27_1","volume-title":"Proc. NIPS","author":"Punyakanok V.","year":"2001","unstructured":"V. Punyakanok and D. Roth . The use of classifiers in sequential inference . In Proc. NIPS , 2001 . V. Punyakanok and D. Roth. The use of classifiers in sequential inference. In Proc. NIPS, 2001."},{"key":"e_1_3_2_1_28_1","doi-asserted-by":"publisher","DOI":"10.5555\/1596374.1596399"},{"key":"e_1_3_2_1_29_1","doi-asserted-by":"publisher","DOI":"10.1145\/584091.584093"},{"key":"e_1_3_2_1_30_1","doi-asserted-by":"publisher","DOI":"10.1145\/2487575.2487686"},{"key":"e_1_3_2_1_31_1","volume-title":"PathSim: Meta path-based top-k similarity search in heterogeneous information networks. PVLDB, 4(11)","author":"Sun Y.","year":"2011","unstructured":"Y. Sun , J. Han , X. Yan , P. Yu , and T. Wu . PathSim: Meta path-based top-k similarity search in heterogeneous information networks. PVLDB, 4(11) , 2011 b. Y. Sun, J. Han, X. Yan, P. Yu, and T. Wu. PathSim: Meta path-based top-k similarity search in heterogeneous information networks. PVLDB, 4(11), 2011b."},{"key":"e_1_3_2_1_32_1","doi-asserted-by":"publisher","DOI":"10.5555\/2002902.2002912"}],"event":{"name":"CIKM '14: 2014 ACM Conference on Information and Knowledge Management","sponsor":["SIGWEB ACM Special Interest Group on Hypertext, Hypermedia, and Web","SIGIR ACM Special Interest Group on Information Retrieval"],"location":"Shanghai China","acronym":"CIKM '14"},"container-title":["Proceedings of the ACM 8th International Workshop on Data and Text Mining in Bioinformatics"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/2665970.2665974","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,11]],"date-time":"2023-01-11T16:01:04Z","timestamp":1673452864000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/2665970.2665974"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,11,7]]},"references-count":32,"alternative-id":["10.1145\/2665970.2665974","10.1145\/2665970"],"URL":"https:\/\/doi.org\/10.1145\/2665970.2665974","relation":{},"subject":[],"published":{"date-parts":[[2014,11,7]]},"assertion":[{"value":"2014-11-07","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}