{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,16]],"date-time":"2024-09-16T20:34:39Z","timestamp":1726518879917},"reference-count":58,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2023,7,3]],"date-time":"2023-07-03T00:00:00Z","timestamp":1688342400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100000903","name":"European External Action Service","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100000903","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Biomedical Informatics"],"published-print":{"date-parts":[[2023,8]]},"DOI":"10.1016\/j.jbi.2023.104437","type":"journal-article","created":{"date-parts":[[2023,7,12]],"date-time":"2023-07-12T01:22:29Z","timestamp":1689124949000},"page":"104437","update-policy":"http:\/\/dx.doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":4,"special_numbering":"C","title":["Eos and OMOCL: Towards a seamless integration of openEHR records into the OMOP Common Data Model"],"prefix":"10.1016","volume":"144","author":[{"ORCID":"http:\/\/orcid.org\/0000-0002-7718-6187","authenticated-orcid":false,"given":"Severin","family":"Kohler","sequence":"first","affiliation":[]},{"given":"Diego","family":"Bosc\u00e1","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0001-9687-376X","authenticated-orcid":false,"given":"Florian","family":"K\u00e4rcher","sequence":"additional","affiliation":[]},{"given":"Birger","family":"Haarbrandt","sequence":"additional","affiliation":[]},{"given":"Manuel","family":"Prinz","sequence":"additional","affiliation":[]},{"given":"Michael","family":"Marschollek","sequence":"additional","affiliation":[]},{"ORCID":"http:\/\/orcid.org\/0000-0002-0034-4036","authenticated-orcid":false,"given":"Roland","family":"Eils","sequence":"additional","affiliation":[]}],"member":"78","reference":[{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1007\/s00392-016-1025-6","article-title":"Electronic health records to facilitate clinical research","volume":"106","author":"Cowie","year":"2017","journal-title":"Clin. Res. Cardiol."},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b2","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1197\/jamia.M2273","article-title":"Toward a national framework for the secondary use of health data: An American medical informatics association white paper","volume":"14","author":"Safran","year":"2007","journal-title":"J. Am. Med. Inform. Assoc JAMIA"},{"issue":"6","key":"10.1016\/j.jbi.2023.104437_b3","first-page":"277","article-title":"Adding value to the electronic health record through secondary use of data for quality assurance, research, and surveillance","volume":"13","author":"Hersh","year":"2007","journal-title":"Am. J. Manag. Care"},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b4","doi-asserted-by":"crossref","first-page":"122","DOI":"10.1186\/s13063-017-1870-2","article-title":"Why clinical trial outcomes fail to translate into benefits for patients","volume":"18","author":"Heneghan","year":"2017","journal-title":"Trials"},{"issue":"6527","key":"10.1016\/j.jbi.2023.104437_b5","doi-asserted-by":"crossref","first-page":"331","DOI":"10.1126\/science.371.6527.331","article-title":"Disgraced COVID-19 studies are still routinely cited","volume":"371","author":"Piller","year":"2021","journal-title":"Science"},{"key":"10.1016\/j.jbi.2023.104437_b6","first-page":"313","article-title":"Barriers to the reuse of routinely recorded clinical data: a field report","volume":"192","author":"Dentler","year":"2013","journal-title":"Stud. Health Technol. Inform."},{"year":"2013","series-title":"Semantic Interoperability for Better Health and Safer Healthcare: Deployment and Research Roadmap for Europe","author":"Commission","key":"10.1016\/j.jbi.2023.104437_b7"},{"issue":"6","key":"10.1016\/j.jbi.2023.104437_b8","doi-asserted-by":"crossref","first-page":"547","DOI":"10.1111\/joim.12119","article-title":"Electronic health records: new opportunities for clinical research","volume":"274","author":"Coorevits","year":"2013","journal-title":"J. Internal Med."},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b9","doi-asserted-by":"crossref","first-page":"38","DOI":"10.3414\/ME9132","article-title":"Perspectives for medical informatics","volume":"48","author":"Prokosch","year":"2009","journal-title":"Methods Inf. Med."},{"year":"2013","series-title":"The Data Warehouse Toolkit: the Definitive Guide To Dimensional Modeling","author":"Kimball","key":"10.1016\/j.jbi.2023.104437_b10"},{"issue":"4","key":"10.1016\/j.jbi.2023.104437_b11","doi-asserted-by":"crossref","first-page":"201","DOI":"10.4258\/hir.2010.16.4.201","article-title":"Detailed clinical models: A review","volume":"16","author":"Goossen","year":"2010","journal-title":"Healthc. Inform. Res."},{"key":"10.1016\/j.jbi.2023.104437_b12","series-title":"MEDINFO 2004","first-page":"145","article-title":"Detailed clinical models for sharable, executable guidelines","author":"Parker","year":"2004"},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b13","doi-asserted-by":"crossref","DOI":"10.1038\/sdata.2016.18","article-title":"The FAIR guiding principles for scientific data management and stewardship","volume":"3","author":"Wilkinson","year":"2016","journal-title":"Sci. Data"},{"key":"10.1016\/j.jbi.2023.104437_b14","series-title":"Proceedings of the 26th IEEE International Symposium on Computer-Based Medical Systems","first-page":"326","article-title":"HL7 FHIR: An agile and RESTful approach to healthcare information exchange","author":"Bender","year":"2013"},{"key":"10.1016\/j.jbi.2023.104437_b15","first-page":"153","article-title":"The openEHR foundation","volume":"115","author":"Kalra","year":"2005","journal-title":"Stud. Health Technol. Inform."},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b16","doi-asserted-by":"crossref","first-page":"30","DOI":"10.1197\/jamia.M1888","article-title":"HL7 clinical document architecture, release 2","volume":"13","author":"Dolin","year":"2006","journal-title":"J. Am. Med. Inform. Assoc. JAMIA"},{"key":"10.1016\/j.jbi.2023.104437_b17","series-title":"Roadmap To Successful Digital Health Ecosystems","first-page":"457","article-title":"Chapter 20 - Norway, Sweden, and Finland as forerunners in open ecosystems and openEHR","author":"Pohjonen","year":"2022"},{"key":"10.1016\/j.jbi.2023.104437_b18","series-title":"MedInfo 2019","article-title":"Towards open electronic health records and data reuse networks: a multinational perspective on current and future OpenEHR implementations","author":"Marco-Ruiz","year":"2019"},{"year":"2023","series-title":"openEHR Website","key":"10.1016\/j.jbi.2023.104437_b19"},{"key":"10.1016\/j.jbi.2023.104437_b20","doi-asserted-by":"crossref","first-page":"e66","DOI":"10.3414\/ME18-02-0002","article-title":"HiGHmed \u2013 an open platform approach to enhance care and research across institutional boundaries","volume":"57","author":"Haarbrandt","year":"2018","journal-title":"Methods Inf. Med."},{"issue":"S 1","key":"10.1016\/j.jbi.2023.104437_b21","first-page":"e57","article-title":"Data integration for future medicine (DIFUTURE)","volume":"57","author":"Prasser","year":"2018","journal-title":"Methods Inf. Med."},{"issue":"S 1","key":"10.1016\/j.jbi.2023.104437_b22","first-page":"e82","article-title":"MIRACUM: Medical informatics in research and care in university medicine","volume":"57","author":"Prokosch","year":"2018","journal-title":"Methods Inf. Med."},{"key":"10.1016\/j.jbi.2023.104437_b23","doi-asserted-by":"crossref","unstructured":"M.L. Braunstein, Health Informatics on FHIR: How HL7\u2019s API Is Transforming Healthcare, second ed., Springer, ISBN: 978-3-030-91562-9, http:\/\/dx.doi.org\/10.1007\/978-3-030-91563-6.","DOI":"10.1007\/978-3-030-91563-6"},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b24","doi-asserted-by":"crossref","first-page":"54","DOI":"10.1136\/amiajnl-2011-000376","article-title":"Validation of a common data model for active safety surveillance research","volume":"19","author":"Overhage","year":"2012","journal-title":"J. Am. Med. Inf. Assoc."},{"year":"2023","series-title":"The Book of OHDSI","author":"OHDSI","key":"10.1016\/j.jbi.2023.104437_b25"},{"key":"10.1016\/j.jbi.2023.104437_b26","first-page":"574","article-title":"Observational health data sciences and informatics (OHDSI): Opportunities for observational researchers","volume":"216","author":"Hripcsak","year":"2015","journal-title":"Stud.Health Technol. Inform."},{"issue":"9","key":"10.1016\/j.jbi.2023.104437_b27","doi-asserted-by":"crossref","first-page":"600","DOI":"10.7326\/0003-4819-153-9-201011020-00010","article-title":"Advancing the science for active surveillance: Rationale and design for the observational medical outcomes partnership","volume":"153","author":"Stang","year":"2010","journal-title":"Ann. Internal Med."},{"issue":"3","key":"10.1016\/j.jbi.2023.104437_b28","doi-asserted-by":"crossref","first-page":"427","DOI":"10.1093\/jamia\/ocaa196","article-title":"The national COVID cohort collaborative (N3C): Rationale, design, infrastructure, and deployment","volume":"28","author":"Haendel","year":"2020","journal-title":"J. Am. Med. Inform. Assoc. JAMIA"},{"issue":"8","key":"10.1016\/j.jbi.2023.104437_b29","doi-asserted-by":"crossref","first-page":"1605","DOI":"10.1093\/jamia\/ocab108","article-title":"Automated production of research data marts from a canonical fast healthcare interoperability resource data repository: applications to COVID-19 research","volume":"28","author":"Lenert","year":"2021","journal-title":"J. Am. Med. Inform. Assoc. JAMIA"},{"issue":"2","key":"10.1016\/j.jbi.2023.104437_b30","doi-asserted-by":"crossref","first-page":"124","DOI":"10.1136\/jamia.2009.000893","article-title":"Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2)","volume":"17","author":"Murphy","year":"2010","journal-title":"J. Am. Med. Inform. Assoc. JAMIA"},{"key":"10.1016\/j.jbi.2023.104437_b31","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1016\/j.jbi.2016.08.007","article-title":"Automated population of an i2b2 clinical data warehouse from an openEHR-based data repository","volume":"63","author":"Haarbrandt","year":"2016","journal-title":"J. Biomed. Inform."},{"key":"10.1016\/j.jbi.2023.104437_b32","first-page":"402","article-title":"From OpenEHR to FHIR and OMOP data model for microbiology findings","author":"Rinaldi","year":"2021","journal-title":"Public Health Inform."},{"year":"2023","series-title":"OMOP on FHIR","author":"Pope","key":"10.1016\/j.jbi.2023.104437_b33"},{"issue":"3","key":"10.1016\/j.jbi.2023.104437_b34","doi-asserted-by":"crossref","DOI":"10.1088\/1742-6596\/1624\/3\/032041","article-title":"How to improve the reuse of clinical data\u2013 openEHR and OMOP CDM","volume":"1624","author":"Li","year":"2020","journal-title":"J. Phys. Conf. Ser."},{"key":"10.1016\/j.jbi.2023.104437_b35","unstructured":"T. Beale, Archetypes: Constraint-based Domain Models for Future-proof Information Systems, in: In Proceedings of the 11thOOPSLA Workshop on Behavioural Semantics, Seattle, WA, USA, 4\u20138 November, 2002."},{"year":"2023","series-title":"openEHR foundation, openEHR - reference model (RM) component - latest","key":"10.1016\/j.jbi.2023.104437_b36"},{"year":"2023","series-title":"openEHR foundation,archetype technology overview","key":"10.1016\/j.jbi.2023.104437_b37"},{"year":"2023","series-title":"openEHR foundation, openEHR - XML schemas (ITS-XML) component - 2.0.0","key":"10.1016\/j.jbi.2023.104437_b38"},{"year":"2023","series-title":"Openehr foundation, openEHR - JSON schemas (ITS-JSON) component - latest","key":"10.1016\/j.jbi.2023.104437_b39"},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b40","first-page":"71","article-title":"Data interchange standards in healthcare it-computable semantic interoperability: Now possible but still difficult. do we really need a better mousetrap?","volume":"20","author":"Mead","year":"2006","journal-title":"J. Healthc. Inform. Manag."},{"year":"2023","series-title":"Ocean informatics, OpenEHR Clinical knowledge manager","key":"10.1016\/j.jbi.2023.104437_b41"},{"year":"2023","series-title":"OHDSI, OMOP common data model","key":"10.1016\/j.jbi.2023.104437_b42"},{"year":"2023","series-title":"OHDSI, Athena","key":"10.1016\/j.jbi.2023.104437_b43"},{"year":"2023","series-title":"GitHub","key":"10.1016\/j.jbi.2023.104437_b44"},{"key":"10.1016\/j.jbi.2023.104437_b45","unstructured":"O. Ben-Kiki, C. Evans, YAML Ain\u2019t Markup Language (YAML\u2122) Version 1.2, 84."},{"issue":"1","key":"10.1016\/j.jbi.2023.104437_b46","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1186\/s12911-020-01374-w","article-title":"The German Corona Consensus dataset (GECCO): a standardized dataset for COVID-19 research in university medicine and beyond","volume":"20","author":"Sass","year":"2020","journal-title":"BMC Med. Inform. Decis. Making"},{"year":"2023","series-title":"Ocean informatics, highmed clinical knowledge manager","key":"10.1016\/j.jbi.2023.104437_b47"},{"year":"2023","series-title":"Netzwerk Universit\u00e4tsmedizin, Home | Netzwerk Universit\u00e4tsmedizin","key":"10.1016\/j.jbi.2023.104437_b48"},{"key":"10.1016\/j.jbi.2023.104437_b49","unstructured":"EN ISO 27269:2022 - Health informatics - International patient summary (ISO 27269:2021), ITeh Standards URL."},{"year":"2022","series-title":"SqlRender","author":"OHDSI","key":"10.1016\/j.jbi.2023.104437_b50"},{"year":"2023","series-title":"OHDSI, Atlas","key":"10.1016\/j.jbi.2023.104437_b51"},{"issue":"10","key":"10.1016\/j.jbi.2023.104437_b52","doi-asserted-by":"crossref","first-page":"2251","DOI":"10.1093\/jamia\/ocab132","article-title":"Increasing trust in real-world evidence through evaluation of observational data quality","volume":"28","author":"Blacketer","year":"2021","journal-title":"J. Am. Medi. Inform. Assoc."},{"key":"10.1016\/j.jbi.2023.104437_b53","first-page":"91","article-title":"openEHR based systems and the general data protection Regulation (GDPR)","volume":"247","author":"Sousa","year":"2018","journal-title":"Stud. Health Technol. Inform."},{"year":"2023","series-title":"Forschungsnetz Covid-19","key":"10.1016\/j.jbi.2023.104437_b54"},{"year":"2023","series-title":"Fast healthcare interoperability resources (FHIR) specification","key":"10.1016\/j.jbi.2023.104437_b55"},{"key":"10.1016\/j.jbi.2023.104437_b56","series-title":"Public Health and Informatics","first-page":"113","article-title":"openEHR is FAIR-enabling by design","author":"Frexia","year":"2021"},{"key":"10.1016\/j.jbi.2023.104437_b57","series-title":"Digital Professionalism in Health and Care: Developing the Workforce, Building the Future","first-page":"127","article-title":"Strategies and Recommendation for Data Loading of FHIR-Based Data Marts with Focus on GDPR Compliance","author":"Anywar","year":"2022"},{"issue":"4","key":"10.1016\/j.jbi.2023.104437_b58","article-title":"No silver bullet: Essence and accident of software engineering","volume":"20","author":"Brroks","year":"1987","journal-title":"Computer"}],"container-title":["Journal of Biomedical Informatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1532046423001582?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1532046423001582?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2024,8,5]],"date-time":"2024-08-05T21:17:00Z","timestamp":1722892620000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1532046423001582"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,8]]},"references-count":58,"alternative-id":["S1532046423001582"],"URL":"https:\/\/doi.org\/10.1016\/j.jbi.2023.104437","relation":{},"ISSN":["1532-0464"],"issn-type":[{"type":"print","value":"1532-0464"}],"subject":[],"published":{"date-parts":[[2023,8]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Eos and OMOCL: Towards a seamless integration of openEHR records into the OMOP Common Data Model","name":"articletitle","label":"Article Title"},{"value":"Journal of Biomedical Informatics","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jbi.2023.104437","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2023 The Author(s). Published by Elsevier Inc.","name":"copyright","label":"Copyright"}],"article-number":"104437"}}