{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,8,6]],"date-time":"2024-08-06T04:33:07Z","timestamp":1722918787352},"reference-count":133,"publisher":"Oxford University Press (OUP)","issue":"5","license":[{"start":{"date-parts":[[2024,5,10]],"date-time":"2024-05-10T00:00:00Z","timestamp":1715299200000},"content-version":"vor","delay-in-days":4239,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-sa\/3.0\/"}],"funder":[{"name":"Major State Basic Research and Development Program of China","award":["2010CB126604"]},{"DOI":"10.13039\/501100001809","name":"NSFC","doi-asserted-by":"publisher","award":["61272380","61173118"],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"name":"JG\u2019s laboratory"},{"name":"Shanghai Education Foundation"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2012,10,1]]},"abstract":"Abstract<\/jats:title>\n MicroRNAs (miRNAs), a class of \u223c20\u201324\u2009nt long non-coding RNAs, have critical roles in diverse biological processes including development, proliferation, stress response, etc. With the development and availability of experimental technologies and computational approaches, the field of miRNA biology has advanced tremendously over the last decade. By sequence complementarity, miRNAs have been estimated to regulate certain mRNA transcripts. Although it was once thought to be simple and straightforward to find plant miRNA targets, this viewpoint is being challenged by genetic and biochemical studies. In this review, we summarize recent progress in plant miRNA target recognition mechanisms, principles of target prediction, and introduce current experimental and computational tools for plant miRNA target prediction. At the end, we also present our thinking on the outlook for future directions in the development of plant miRNA target finding methods.<\/jats:p>","DOI":"10.1016\/j.gpb.2012.09.003","type":"journal-article","created":{"date-parts":[[2012,10,23]],"date-time":"2012-10-23T09:17:37Z","timestamp":1350983857000},"page":"264-275","source":"Crossref","is-referenced-by-count":47,"title":["Finding MicroRNA Targets in Plants: Current Status and Perspectives"],"prefix":"10.1093","volume":"10","author":[{"given":"Jiandong","family":"Ding","sequence":"first","affiliation":[{"name":"Shanghai Key Laboratory of Intelligent Information Processing, Fudan University , Shanghai 200433 , China"},{"name":"School of Computer Science, Fudan University , Shanghai 200433 , China"}]},{"given":"Shuigeng","family":"Zhou","sequence":"additional","affiliation":[{"name":"Shanghai Key Laboratory of Intelligent Information Processing, Fudan University , Shanghai 200433 , China"},{"name":"School of Computer Science, Fudan University , Shanghai 200433 , China"}]},{"given":"Jihong","family":"Guan","sequence":"additional","affiliation":[{"name":"Department of Computer Science and Technology, Tongji University , Shanghai 201804 , China"}]}],"member":"286","published-online":{"date-parts":[[2012,10,22]]},"reference":[{"key":"2024051008305909000_bib1","doi-asserted-by":"crossref","first-page":"94","DOI":"10.1038\/nrg2504","article-title":"Small silencing RNAs: an expanding universe","volume":"10","author":"Ghildiyal","year":"2009","journal-title":"Nat Rev Genet"},{"key":"2024051008305909000_bib2","doi-asserted-by":"crossref","first-page":"843","DOI":"10.1016\/0092-8674(93)90529-Y","article-title":"The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to 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