{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,7,18]],"date-time":"2024-07-18T08:21:54Z","timestamp":1721290914920},"reference-count":40,"publisher":"Wiley","issue":"16","license":[{"start":{"date-parts":[[2015,5,28]],"date-time":"2015-05-28T00:00:00Z","timestamp":1432771200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"funder":[{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["0846655","1047916"],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Concurrency and Computation"],"published-print":{"date-parts":[[2015,11]]},"abstract":"Summary<\/jats:title>Biomass, for example, energy crops, forests, and agricultural residues, has emerged as a renewable energy option to alleviate the consumption of limited fossil fuel resources and the consequent environmental issues. Designing an effective and efficient biomass\u2010to\u2010biofuel supply chain involves sophisticated decision\u2010making processes, often requiring collaborative work on data integration, model specification, scenario analysis, and coordinated implementation and management. To establish an integrated system for such work, challenges exist in (1) the limited interoperability between bioenergy models and geographic information systems (GIS); (2) interactive scenario construction, evaluation, and sharing; and (3) complex optimization problem solving that requires advanced cyberinfrastructure resources to support interactive decision\u2010making. To resolve these challenges, this paper describes CyberGIS\u2010BioScope, an interactive and collaborative cyberGIS\u2010based spatial decision\u2010making environment for biomass\u2010to\u2010biofuel supply chain optimization. The CyberGIS\u2010BioScope takes advantage of cyberGIS capabilities to process and analyze spatial data and enhance visualization and sharing of optimization results. Meanwhile, the integrated environment makes the complex optimization model and advanced cyberinfrastructure resources easily accessible for agricultural scientists and decision\u2010makers and thus accelerates their scientific discovery and decision\u2010making processes. Copyright \u00a9 2015\u2009John Wiley & Sons, Ltd.<\/jats:p>","DOI":"10.1002\/cpe.3535","type":"journal-article","created":{"date-parts":[[2015,5,28]],"date-time":"2015-05-28T14:00:49Z","timestamp":1432821649000},"page":"4437-4450","source":"Crossref","is-referenced-by-count":14,"title":["CyberGIS\u2010BioScope: a cyberinfrastructure\u2010based spatial decision\u2010making environment for biomass\u2010to\u2010biofuel supply chain optimization"],"prefix":"10.1002","volume":"27","author":[{"given":"Hao","family":"Hu","sequence":"first","affiliation":[{"name":"Department of Geography and Geographic Information Science University of Illinois at Urbana\u2010Champaign Champaign IL USA"}]},{"given":"Tao","family":"Lin","sequence":"additional","affiliation":[{"name":"National Center for Supercomputing Applications University of Illinois at Urbana\u2010Champaign Urbana IL USA"},{"name":"Department of Agricultural and Biological Engineering University of Illinois at Urbana\u2010Champaign Urbana IL USA"}]},{"given":"Yan Y.","family":"Liu","sequence":"additional","affiliation":[{"name":"Department of Geography and Geographic Information Science University of Illinois at Urbana\u2010Champaign Champaign IL USA"},{"name":"National Center for Supercomputing Applications University of Illinois at Urbana\u2010Champaign Urbana IL USA"}]},{"given":"Shaowen","family":"Wang","sequence":"additional","affiliation":[{"name":"Department of Geography and Geographic Information Science University of Illinois at Urbana\u2010Champaign Champaign IL USA"},{"name":"National Center for Supercomputing Applications University of Illinois at Urbana\u2010Champaign Urbana IL USA"}]},{"given":"Luis F.","family":"Rodr\u00edguez","sequence":"additional","affiliation":[{"name":"Department of Agricultural and Biological Engineering University of Illinois at Urbana\u2010Champaign Urbana IL USA"}]}],"member":"311","published-online":{"date-parts":[[2015,5,28]]},"reference":[{"key":"e_1_2_7_2_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ces.2011.05.055"},{"key":"e_1_2_7_3_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0925-8574(00)00057-4"},{"key":"e_1_2_7_4_1","doi-asserted-by":"publisher","DOI":"10.1007\/s12155-010-9108-0"},{"key":"e_1_2_7_5_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tre.2010.03.002"},{"key":"e_1_2_7_6_1","doi-asserted-by":"publisher","DOI":"10.1021\/ie200850t"},{"key":"e_1_2_7_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.compchemeng.2011.02.008"},{"key":"e_1_2_7_8_1","doi-asserted-by":"publisher","DOI":"10.1002\/bbb.1394"},{"key":"e_1_2_7_9_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.envsoft.2005.09.005"},{"key":"e_1_2_7_10_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.envsoft.2012.05.016"},{"key":"e_1_2_7_11_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.enpol.2011.01.011"},{"key":"e_1_2_7_12_1","volume-title":"A Framework for Geodesign: Changing Geography by Design","author":"Steinitz C","year":"2012"},{"key":"e_1_2_7_13_1","doi-asserted-by":"publisher","DOI":"10.1080\/00045601003791243"},{"key":"e_1_2_7_14_1","doi-asserted-by":"publisher","DOI":"10.1080\/13658816.2013.776049"},{"key":"e_1_2_7_15_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0961-9534(03)00079-5"},{"key":"e_1_2_7_16_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.energy.2008.10.012"},{"key":"e_1_2_7_17_1","doi-asserted-by":"publisher","DOI":"10.1016\/0961-9534(95)00065-8"},{"key":"e_1_2_7_18_1","unstructured":"ESRI.Environmental Systems Research Institute Redlands CA 1995. (Available from:http:\/\/esri.com) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_19_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.renene.2010.05.009"},{"key":"e_1_2_7_20_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-0-387-92280-5_3"},{"key":"e_1_2_7_21_1","unstructured":"CPLEX optimizer. (Available from:http:\/\/ibm.com\/software\/commerce\/optimization\/cplex-optimizer\/) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_22_1","unstructured":"Gurobi Optimization Inc..Gurobi Optimizer Reference Manual 2015. (Available from:http:\/\/www.gurobi.com\/support\/faqs) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_23_1","unstructured":"Gurobi distributed optimization. (Available from:http:\/\/gurobi.com\/products\/distributed-optimization\\#MIP) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_24_1","doi-asserted-by":"publisher","DOI":"10.1002\/cpe.3256"},{"key":"e_1_2_7_25_1","unstructured":"Sencha ExtJS. (Available from:http:\/\/sencha.com) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_26_1","unstructured":"OpenLayers. (Available from:http:\/\/openlayers.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_27_1","unstructured":"Open Geospatial Consortium. (Available from:http:\/\/opengeospatial.org\/) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_28_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1757-1707.2011.01150.x"},{"key":"e_1_2_7_29_1","unstructured":"U.S. Department of Agriculture. National Agricultural Statistics Service. 2011. Quick Stats.(Available from:http:\/\/quickstats.nass.usda.gov\/) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_30_1","unstructured":"OpenStreetMap project. (Available from:http:\/\/openstreetmap.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_31_1","doi-asserted-by":"crossref","unstructured":"LuxenD VetterC.Real\u2010time routing with OpenStreetMap data. Proceedings of the 19th ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems GIS '11 ACM New York NY USA 2011;513\u2013516.","DOI":"10.1145\/2093973.2094062"},{"key":"e_1_2_7_32_1","unstructured":"OpenMP. (Available from:http:\/\/openmp.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_33_1","unstructured":"GeoServer. (Available from:http:\/\/geoserver.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_34_1","unstructured":"SDSC Trestles resource. (Available from:http:\/\/trestles.sdsc.edu) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_35_1","unstructured":"SLURM (Simple Linux Utility for Resource Management). (Available from:http:\/\/slurm.schedmd.com) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_36_1","unstructured":"PBS (Portable Batch System). (Available from:http:\/\/openpbs.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_37_1","unstructured":"The CyberGIS Gateway interface. (Available from:http:\/\/gateway.cybergis.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_38_1","article-title":"A scalable parallel genetic algorithm for the generalized assignment problem","author":"Liu YY","year":"2014","journal-title":"Parallel Computing"},{"key":"e_1_2_7_39_1","unstructured":"The Weather Research and Forecasting model (WRF). (Available from:http:\/\/wrf-model.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_40_1","unstructured":"Apache Airavata. (Available from:http:\/\/airavata.apache.org) [Accessed on 11 March 2015]."},{"key":"e_1_2_7_41_1","unstructured":"Kepler. (Available from:https:\/\/kepler-project.org\/) [Accessed on 11 March 2015]."}],"container-title":["Concurrency and Computation: Practice and Experience"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2Fcpe.3535","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/cpe.3535","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/full-xml\/10.1002\/cpe.3535","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/cpe.3535","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,9,13]],"date-time":"2023-09-13T12:01:47Z","timestamp":1694606507000},"score":1,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/cpe.3535"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,5,28]]},"references-count":40,"journal-issue":{"issue":"16","published-print":{"date-parts":[[2015,11]]}},"alternative-id":["10.1002\/cpe.3535"],"URL":"https:\/\/doi.org\/10.1002\/cpe.3535","archive":["Portico"],"relation":{},"ISSN":["1532-0626","1532-0634"],"issn-type":[{"value":"1532-0626","type":"print"},{"value":"1532-0634","type":"electronic"}],"subject":[],"published":{"date-parts":[[2015,5,28]]}}}